| Definition | Burkholderia cenocepacia HI2424 chromosome 1, complete sequence. |
|---|---|
| Accession | NC_008542 |
| Length | 3,483,902 |
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The map label for this gene is 116690751
Identifier: 116690751
GI number: 116690751
Start: 3025881
End: 3026912
Strand: Reverse
Name: 116690751
Synonym: Bcen2424_2731
Alternate gene names: NA
Gene position: 3026912-3025881 (Counterclockwise)
Preceding gene: 116690752
Following gene: 116690750
Centisome position: 86.88
GC content: 69.48
Gene sequence:
>1032_bases ATGTCTGAATCGCGTTCGTTGTTCAACCGTAGCAAACCGTCGAAGCCGTGGGCTCGACGGGTCGGCACGCTGCTGATGGT CGGCCTGCTCACGGCCGGCACGTTCGCATCGCTCGACGCCGAAGCCCGGCGCATGGGCGGCGGGCGCAGCATCGGTCGCC AGAATTCCACCGTCACGCAGCGCCAGGCCACGCCGCCCGCGCAGCAGCCGATGCAGCAGGCCGCGCCGTCGCAGGCCCAG CGTGCGAACCCGGCTGCGCCCACGCCGGCCGCGCAGCCCAACCGCTCGCGCTGGCTCGGGCCGATCGCCGGCCTCGCGGC CGGTCTCGGCATCGCGGCGCTGCTGTCGCACTTCGGTCTCGGCGGCGCATTCGCGAGCATGATGGCGAACGTCATCGTGA TCGCGTTGCTCGCGATGGTCGGCATCTGGCTGATCCGCAAGTTCATGAACCGCCGTCGCCCGCAGGAGCCGGCGTATTCG GTCGGCGGCGCGGCTTCGTCGTCGGGCGGCTACTCGCAAAGCCCGTCGTTCCAGCAGGGCAACACCGGCAGCAACTACGC GGGCAGCGGCAGCAGCTATGCGAACGAAGCACAGGGCGTATTCGGCGGCGGTGCAGCGGCCGCCGGCGCAGCCGCGGCGG CCGCGGCGCCGCTGCAGGTGCCGGCCGGTTTCGACACCGAAGCGTTCCTGCGCAGCGCGAAAGTCTATTTCGTGCGCCTG CAGGCGGCGTGGGACCAGGGCAACCTGGCCGACATCCGCGAGTTCACGACGCCCGAAATGTTCGCCGAGATCAAGATCGA CCTCGATTCGCGCGGCAACGACGCGAACCAGACCGACGTCGTGCAGCTCGACGCGGAACTGGTCGCGATCGAGGATCGCG GCATCGAGCAGTCGGCGAGCGTGCGCTTCCACGGCCTGATCCGCGAAGCGGCGAATACGTCGGCCGCGCCGTTCGACGAG GTGTGGAACCTGTCGAAGTCGGGCAGTCAGGGCTGGCTGCTCGCGGGTATCCAGCAGATCAACACGCACTGA
Upstream 100 bases:
>100_bases TCAAATATTACAATTTGTCAGGTGGCGTGGTAGCTTTACACCTAGGGACCAAGTACTAAGGGGTTCTTTCCCTACATTCG TCTTACATTCGGAGAAGCTG
Downstream 100 bases:
>100_bases GCGTGGCCGGCGGCCCGCGCCGCCGGGCACCCGGGCGACGGCCGCCGCACTGCGACCGCTTGCCGCCCGGGTGTACGGTC AGGCACGGTCTGCCGCCGAT
Product: import inner membrane translocase, subunit Tim44
Products: NA
Alternate protein names: Transmembrane Protein; Tim44 Domain Protein; Hypothtical Protein; Import Inner Membrane Translocase Subunit; Tim44-Like Domain-Containing Protein; Tim44-Like Domain Protein
Number of amino acids: Translated: 343; Mature: 342
Protein sequence:
>343_residues MSESRSLFNRSKPSKPWARRVGTLLMVGLLTAGTFASLDAEARRMGGGRSIGRQNSTVTQRQATPPAQQPMQQAAPSQAQ RANPAAPTPAAQPNRSRWLGPIAGLAAGLGIAALLSHFGLGGAFASMMANVIVIALLAMVGIWLIRKFMNRRRPQEPAYS VGGAASSSGGYSQSPSFQQGNTGSNYAGSGSSYANEAQGVFGGGAAAAGAAAAAAAPLQVPAGFDTEAFLRSAKVYFVRL QAAWDQGNLADIREFTTPEMFAEIKIDLDSRGNDANQTDVVQLDAELVAIEDRGIEQSASVRFHGLIREAANTSAAPFDE VWNLSKSGSQGWLLAGIQQINTH
Sequences:
>Translated_343_residues MSESRSLFNRSKPSKPWARRVGTLLMVGLLTAGTFASLDAEARRMGGGRSIGRQNSTVTQRQATPPAQQPMQQAAPSQAQ RANPAAPTPAAQPNRSRWLGPIAGLAAGLGIAALLSHFGLGGAFASMMANVIVIALLAMVGIWLIRKFMNRRRPQEPAYS VGGAASSSGGYSQSPSFQQGNTGSNYAGSGSSYANEAQGVFGGGAAAAGAAAAAAAPLQVPAGFDTEAFLRSAKVYFVRL QAAWDQGNLADIREFTTPEMFAEIKIDLDSRGNDANQTDVVQLDAELVAIEDRGIEQSASVRFHGLIREAANTSAAPFDE VWNLSKSGSQGWLLAGIQQINTH >Mature_342_residues SESRSLFNRSKPSKPWARRVGTLLMVGLLTAGTFASLDAEARRMGGGRSIGRQNSTVTQRQATPPAQQPMQQAAPSQAQR ANPAAPTPAAQPNRSRWLGPIAGLAAGLGIAALLSHFGLGGAFASMMANVIVIALLAMVGIWLIRKFMNRRRPQEPAYSV GGAASSSGGYSQSPSFQQGNTGSNYAGSGSSYANEAQGVFGGGAAAAGAAAAAAAPLQVPAGFDTEAFLRSAKVYFVRLQ AAWDQGNLADIREFTTPEMFAEIKIDLDSRGNDANQTDVVQLDAELVAIEDRGIEQSASVRFHGLIREAANTSAAPFDEV WNLSKSGSQGWLLAGIQQINTH
Specific function: Unknown
COG id: COG4395
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 35962; Mature: 35831
Theoretical pI: Translated: 10.18; Mature: 10.18
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSESRSLFNRSKPSKPWARRVGTLLMVGLLTAGTFASLDAEARRMGGGRSIGRQNSTVTQ CCCCHHHHHCCCCCCHHHHHHHHHHHHHHHHHCHHHHCCHHHHHCCCCCCCCCCCCCCHH RQATPPAQQPMQQAAPSQAQRANPAAPTPAAQPNRSRWLGPIAGLAAGLGIAALLSHFGL HCCCCCHHHHHHHHCCHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCC GGAFASMMANVIVIALLAMVGIWLIRKFMNRRRPQEPAYSVGGAASSSGGYSQSPSFQQG HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHCCCCCCCCCCCCCCCCCCCC NTGSNYAGSGSSYANEAQGVFGGGAAAAGAAAAAAAPLQVPAGFDTEAFLRSAKVYFVRL CCCCCCCCCCCCHHHHCCCCCCCCHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHEEEEEE QAAWDQGNLADIREFTTPEMFAEIKIDLDSRGNDANQTDVVQLDAELVAIEDRGIEQSAS EECCCCCCHHHHHHHCCHHHEEEEEEEECCCCCCCCCCCEEEECCEEEEEECCCCCHHHH VRFHGLIREAANTSAAPFDEVWNLSKSGSQGWLLAGIQQINTH HHHHHHHHHHHCCCCCCHHHHHCCCCCCCCCHHHHHHHHHCCC >Mature Secondary Structure SESRSLFNRSKPSKPWARRVGTLLMVGLLTAGTFASLDAEARRMGGGRSIGRQNSTVTQ CCCHHHHHCCCCCCHHHHHHHHHHHHHHHHHCHHHHCCHHHHHCCCCCCCCCCCCCCHH RQATPPAQQPMQQAAPSQAQRANPAAPTPAAQPNRSRWLGPIAGLAAGLGIAALLSHFGL HCCCCCHHHHHHHHCCHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCC GGAFASMMANVIVIALLAMVGIWLIRKFMNRRRPQEPAYSVGGAASSSGGYSQSPSFQQG HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHCCCCCCCCCCCCCCCCCCCC NTGSNYAGSGSSYANEAQGVFGGGAAAAGAAAAAAAPLQVPAGFDTEAFLRSAKVYFVRL CCCCCCCCCCCCHHHHCCCCCCCCHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHEEEEEE QAAWDQGNLADIREFTTPEMFAEIKIDLDSRGNDANQTDVVQLDAELVAIEDRGIEQSAS EECCCCCCHHHHHHHCCHHHEEEEEEEECCCCCCCCCCCEEEECCEEEEEECCCCCHHHH VRFHGLIREAANTSAAPFDEVWNLSKSGSQGWLLAGIQQINTH HHHHHHHHHHHCCCCCCHHHHHCCCCCCCCCHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA