Definition Burkholderia cenocepacia HI2424 chromosome 1, complete sequence.
Accession NC_008542
Length 3,483,902

Click here to switch to the map view.

The map label for this gene is 116690736

Identifier: 116690736

GI number: 116690736

Start: 3009118

End: 3009600

Strand: Reverse

Name: 116690736

Synonym: Bcen2424_2716

Alternate gene names: NA

Gene position: 3009600-3009118 (Counterclockwise)

Preceding gene: 116690738

Following gene: 116690734

Centisome position: 86.39

GC content: 65.22

Gene sequence:

>483_bases
ATGGGACTCAGCGACGCTCCGTTGCTCTTCAACTTCGAACACGATTCGTCGGAAAACTTCACGTACATCCCGATGATCGT
GCGTTTCAATCTCGACCGCTTCGGGCTGCGGATTTCGCTCGAACAGTGGCAACTGCTGCCGCTCGAGGACCGCAAGCTGC
TCGCGCGCTTTCCGGCCGACGACGACACCGCGATCGAGCCCAATTTCGATCACGCGCTGTTCGAAATGCTGCGCACGCAC
GCCGATCTGGAGCCGTCATGGTTCCAGCCGGACGAGCAACCGGCCTGGCGCACCGTCGACACGGTGCCGGCGTCGCTCGT
GCAGCAAAGCGCGCTGGCCGGGCTGCCGGCGCCGGCGCTCGCGCAGTGGCAGCGGCTTGCGCCATTCCAGCGCTACGTGC
TGGTCAAGCTGTCGCGCAAGCCGGCGCTGAATCACGATTTCGTGCCCGCGATGCGGGAGTTCGGGCTGGCCGCCACGCAC
TGA

Upstream 100 bases:

>100_bases
AGCGCGGCCGGCGACGATCGTACCGCCGCCCGCGCGCAGAGGTTCTAAAATACCCCAGGCAAGCCGGCCGCGCCGGCATC
CGCCACGTCAGGTAACGACC

Downstream 100 bases:

>100_bases
CCGGCCGTATGCCGCGCCGCATGCCGCGCTGCGCTGCGCTGCGGCGCGTGCGCATCAGAGCGGCGGCAGTTGGCGCGGCT
TGCGGTCCGACCCGGTCGCG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 160; Mature: 159

Protein sequence:

>160_residues
MGLSDAPLLFNFEHDSSENFTYIPMIVRFNLDRFGLRISLEQWQLLPLEDRKLLARFPADDDTAIEPNFDHALFEMLRTH
ADLEPSWFQPDEQPAWRTVDTVPASLVQQSALAGLPAPALAQWQRLAPFQRYVLVKLSRKPALNHDFVPAMREFGLAATH

Sequences:

>Translated_160_residues
MGLSDAPLLFNFEHDSSENFTYIPMIVRFNLDRFGLRISLEQWQLLPLEDRKLLARFPADDDTAIEPNFDHALFEMLRTH
ADLEPSWFQPDEQPAWRTVDTVPASLVQQSALAGLPAPALAQWQRLAPFQRYVLVKLSRKPALNHDFVPAMREFGLAATH
>Mature_159_residues
GLSDAPLLFNFEHDSSENFTYIPMIVRFNLDRFGLRISLEQWQLLPLEDRKLLARFPADDDTAIEPNFDHALFEMLRTHA
DLEPSWFQPDEQPAWRTVDTVPASLVQQSALAGLPAPALAQWQRLAPFQRYVLVKLSRKPALNHDFVPAMREFGLAATH

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 18355; Mature: 18224

Theoretical pI: Translated: 4.95; Mature: 4.95

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
1.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGLSDAPLLFNFEHDSSENFTYIPMIVRFNLDRFGLRISLEQWQLLPLEDRKLLARFPAD
CCCCCCCEEEEECCCCCCCEEEEEEEEEECCCHHCEEEEECCEEECCCCCCHHHEECCCC
DDTAIEPNFDHALFEMLRTHADLEPSWFQPDEQPAWRTVDTVPASLVQQSALAGLPAPAL
CCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCHHH
AQWQRLAPFQRYVLVKLSRKPALNHDFVPAMREFGLAATH
HHHHHCCHHHHEEEEEECCCCCCCCCHHHHHHHCCCCCCC
>Mature Secondary Structure 
GLSDAPLLFNFEHDSSENFTYIPMIVRFNLDRFGLRISLEQWQLLPLEDRKLLARFPAD
CCCCCCEEEEECCCCCCCEEEEEEEEEECCCHHCEEEEECCEEECCCCCCHHHEECCCC
DDTAIEPNFDHALFEMLRTHADLEPSWFQPDEQPAWRTVDTVPASLVQQSALAGLPAPAL
CCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCHHH
AQWQRLAPFQRYVLVKLSRKPALNHDFVPAMREFGLAATH
HHHHHCCHHHHEEEEEECCCCCCCCCHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA