| Definition | Burkholderia cenocepacia HI2424 chromosome 1, complete sequence. |
|---|---|
| Accession | NC_008542 |
| Length | 3,483,902 |
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The map label for this gene is yieH [H]
Identifier: 116690707
GI number: 116690707
Start: 2976886
End: 2977620
Strand: Direct
Name: yieH [H]
Synonym: Bcen2424_2687
Alternate gene names: 116690707
Gene position: 2976886-2977620 (Clockwise)
Preceding gene: 116690706
Following gene: 116690712
Centisome position: 85.45
GC content: 65.85
Gene sequence:
>735_bases ATGATGGCGAATCGATCGGCGTCGCCGATATCCCGCGTTTTCATCACCATGCTCGATCACCTCATCTGCGACTGCGACGG CGTGCTCGTCGACAGCGAAGTCATCGCCGACCGCGTGCTGCTCGACACGCTGTCCGCCACGTTCCCGAATCTCGATTTCG AAGCCGCCGCGAAGTCGGCATTCGGCCAGCAGACGTCGCGCTTCCTCACCGGCATCGAATCCCGCTTCGGCATCGAAATG CCTGCCAACTTCATCGAGACCATCGAGCACAACATCGAGATCGCGCTCGCGCAATCGCTCACGCCGATCAGCGGTGTGCG CGACGCGCTGCTGAAGGTCACGCTGCCGGCCGCCGTCGTGTCGAACAGCCGGCTCGTGCGCGTGCGCAATTCGCTGAAGC GCGCGTCGCTCACCGAGATCTTCGGCGAGCGGGTGTTCAGCTCCGAACAGGTCGCGCGGCCGAAGCCCTACCCCGACGTC TACCTGCATGCGGCACACACGCTCGGCGTCGAGCCGGCGCGCTGCGTCGTCGTCGAGGACAGCATTTCGGGGCTGAATGC CGCGCGGGCGGCCGGGATGAAGACGATCGCGTTCGTCGGCGCGAGCCACATCCCCGACAACTACGCGGACGCGCTGCGCG CGATGGGCATCACGCGGATCATGCGCAAGATGGACGAACTGCCGGCGCTCGTCGAAGCCGGCATGCGCGGCGAATTCGGC GACGTGCAGTCCTGA
Upstream 100 bases:
>100_bases GCTGCGCGAGCGGCGGCGCCCCGGCACGACCTGCCGCAACCCCACGGCGGCATCGGGCAAATTTGCCGCCACGTCACACG GCATGCGCGTGAAAGCACGT
Downstream 100 bases:
>100_bases TCGTCATTCGGGCCGGATCGATCGATCCGGCCGCGCCACGGGCGCGCGAACGCGCCCGCCTTTCCTTCGCTCAGGCCGGC TCGCAGCAGCGTTCGCGCGC
Product: HAD family hydrolase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 244; Mature: 244
Protein sequence:
>244_residues MMANRSASPISRVFITMLDHLICDCDGVLVDSEVIADRVLLDTLSATFPNLDFEAAAKSAFGQQTSRFLTGIESRFGIEM PANFIETIEHNIEIALAQSLTPISGVRDALLKVTLPAAVVSNSRLVRVRNSLKRASLTEIFGERVFSSEQVARPKPYPDV YLHAAHTLGVEPARCVVVEDSISGLNAARAAGMKTIAFVGASHIPDNYADALRAMGITRIMRKMDELPALVEAGMRGEFG DVQS
Sequences:
>Translated_244_residues MMANRSASPISRVFITMLDHLICDCDGVLVDSEVIADRVLLDTLSATFPNLDFEAAAKSAFGQQTSRFLTGIESRFGIEM PANFIETIEHNIEIALAQSLTPISGVRDALLKVTLPAAVVSNSRLVRVRNSLKRASLTEIFGERVFSSEQVARPKPYPDV YLHAAHTLGVEPARCVVVEDSISGLNAARAAGMKTIAFVGASHIPDNYADALRAMGITRIMRKMDELPALVEAGMRGEFG DVQS >Mature_244_residues MMANRSASPISRVFITMLDHLICDCDGVLVDSEVIADRVLLDTLSATFPNLDFEAAAKSAFGQQTSRFLTGIESRFGIEM PANFIETIEHNIEIALAQSLTPISGVRDALLKVTLPAAVVSNSRLVRVRNSLKRASLTEIFGERVFSSEQVARPKPYPDV YLHAAHTLGVEPARCVVVEDSISGLNAARAAGMKTIAFVGASHIPDNYADALRAMGITRIMRKMDELPALVEAGMRGEFG DVQS
Specific function: Catalyzes the dephosphorylation of the artificial chromogenic substrate p-nitrophenyl phosphate (pNPP) and of the natural substrates phosphoenolpyruvate and AMP [H]
COG id: COG0637
COG function: function code R; Predicted phosphatase/phosphohexomutase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the HAD-like hydrolase superfamily. CbbY/CbbZ/Gph/YieH family [H]
Homologues:
Organism=Escherichia coli, GI1790151, Length=182, Percent_Identity=29.1208791208791, Blast_Score=84, Evalue=7e-18, Organism=Escherichia coli, GI1788021, Length=181, Percent_Identity=30.939226519337, Blast_Score=70, Evalue=2e-13, Organism=Drosophila melanogaster, GI20129151, Length=223, Percent_Identity=27.8026905829596, Blast_Score=70, Evalue=2e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005834 - InterPro: IPR023214 - InterPro: IPR006439 - InterPro: IPR006402 - InterPro: IPR005833 [H]
Pfam domain/function: PF00702 Hydrolase [H]
EC number: NA
Molecular weight: Translated: 26434; Mature: 26434
Theoretical pI: Translated: 5.67; Mature: 5.67
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 3.7 %Met (Translated Protein) 4.9 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 3.7 %Met (Mature Protein) 4.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MMANRSASPISRVFITMLDHLICDCDGVLVDSEVIADRVLLDTLSATFPNLDFEAAAKSA CCCCCCCCHHHHHHHHHHHHHHHCCCCEEECHHHHHHHHHHHHHHHHCCCCCHHHHHHHH FGQQTSRFLTGIESRFGIEMPANFIETIEHNIEIALAQSLTPISGVRDALLKVTLPAAVV HHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCHHEEECCCCCCHHHHHHHHHHHHHHHHHH SNSRLVRVRNSLKRASLTEIFGERVFSSEQVARPKPYPDVYLHAAHTLGVEPARCVVVED CCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHCCCCCCCCCEEEHHHHCCCCCCEEEEEEC SISGLNAARAAGMKTIAFVGASHIPDNYADALRAMGITRIMRKMDELPALVEAGMRGEFG CCCCHHHHHHHCHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC DVQS CCCC >Mature Secondary Structure MMANRSASPISRVFITMLDHLICDCDGVLVDSEVIADRVLLDTLSATFPNLDFEAAAKSA CCCCCCCCHHHHHHHHHHHHHHHCCCCEEECHHHHHHHHHHHHHHHHCCCCCHHHHHHHH FGQQTSRFLTGIESRFGIEMPANFIETIEHNIEIALAQSLTPISGVRDALLKVTLPAAVV HHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCHHEEECCCCCCHHHHHHHHHHHHHHHHHH SNSRLVRVRNSLKRASLTEIFGERVFSSEQVARPKPYPDVYLHAAHTLGVEPARCVVVED CCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHCCCCCCCCCEEEHHHHCCCCCCEEEEEEC SISGLNAARAAGMKTIAFVGASHIPDNYADALRAMGITRIMRKMDELPALVEAGMRGEFG CCCCHHHHHHHCHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC DVQS CCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 7686882; 9278503 [H]