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The map label for this gene is glpD [H]

Identifier: 116690697

GI number: 116690697

Start: 2965756

End: 2967279

Strand: Direct

Name: glpD [H]

Synonym: Bcen2424_2677

Alternate gene names: 116690697

Gene position: 2965756-2967279 (Clockwise)

Preceding gene: 116690695

Following gene: 116690698

Centisome position: 85.13

GC content: 68.9

Gene sequence:

>1524_bases
GTGACCCAACCGAATCGCTACGATCTGCTCGTCGTCGGCGGCGGCATCAACGGCGCGGGGATCGCGCGCGATGCGGCCGG
CCGCGGCCTGTCGGTCATGCTCTGCGAGCAGGACGACCTCGCGTCGCACACGTCGTCGTCCAGCACGAAGCTGATTCACG
GCGGCCTGCGTTACCTCGAGTACAACGAGTTCGGGCTGGTGCGCAAGGCGCTGCAGGAACGCGAAACACTGCTGCGCGCC
GCGCCGCACATCATGTGGCCGCTGCGCTTCGTGATGCCGCACATGCCGAACCTGCGCCCGGCCTGGCTGATCCGCATCGG
CCTGTTCCTCTACGATCACCTCGCGAAACGCGAGCTGCTGCCCGGCTCGCGCGGCATCGACATGCGCCGCCATGCGGCCG
GCGCGCCGCTGATCGACTCGATCAAGCGCGGCTTCGTGTATTCCGACGGCTGGGTCGACGACGCGCGCCTCGTCGTGCTG
AACGCGATGGATGCGAAGGAGCGCGGCGCCGAGATCCTGACGCGCACGAAGCTCGTTTCCGCCGAACGCCGCGGCGACGA
ATGGGAAGCGCGGCTGCAGCACGCCGACGGTTCGATCCGCGTCGTGCATGCGCGCGCGATCGCGAACGCGGCCGGCCCGT
GGGTCGGCGAGGTGCTGCACGGCGCGCTCGGCCGCGGCGCGCATCATAGCGTGCGGCTCGTGAAGGGCAGCCACATCATC
ACGCACCGCCTGTTCGATCACGATCACGCGTACATCTTCCAGAATCCGGACAAGCGGATCATCTTCGCGATTCCGTACGA
GCACGACTTCACGCTGATCGGCACGACCGACGTCGAATACACGAACGATCCCGCGAAGGTCGCGATCGATCGCGACGAGA
CGCAATACCTGTGCGATTCGATCAACCGCTACTTCAAGCGCAAGATCTCGCCGGCCGACGTGCACTGGACCTATTCGGGC
GTGCGCCCGCTGCTGGAAGACGAGAACGCGGCGAACGCATCGGCCGTCACGCGCGACTATCGCCTCGAACTCGACGATGG
CGCGGGCGCCCCGCTGCTGTCGGTGTTCGGCGGCAAGATCACGACGTTCCGCAAGCTCGCGGAAGAAGCCGGCGACATGC
TGTGCCGCGCGCTCGGCCGCGATGCGAAGACCTGGACGGCCGGCGTCGCGCTGCCGGGCGGCGACATCGCGGACGCGAAG
TTCGACGGGTTCGCCAGCGCGTTCGCGAAACGCCATCCGTGGCTGCCCGCCGCGCTCGCGCGCCGCTATGCACGTGCGTA
CGGCACGCGTGCGGAGCGCGTGGTCGACGGCGCAAAGTCGCTCGCCGATCTCGGCGCCGAAATCGCGCCGGGCATCCACG
ACGCCGAACTGCGCTACCTGCGCGATGCCGAATGGGCGACCTGCGCGCAGGACGTACTGTGGCGCCGCTCGAAGCTCGGC
CTGCACGTCGCGCCCGGCACGCTCGACGCGGTGACCGCCGCGGTCGATGCGTGGTTCGCCGCCGCGCATGCGCCGCATGC
GTGA

Upstream 100 bases:

>100_bases
GCCCCGCTTTTTCGAACTTTACTTTTTCGATTTCGTTCGTTAAATTTCGAATTCGAACATTTCATGTTCACCCTATTTCA
ACAGACGATAAGGACAGCAG

Downstream 100 bases:

>100_bases
TCCGAATGCAGTTGCAATGGTAGTTTTGCCTGACCGACGTTGATTCACCGACGCGCCGCCCCACATGCGGCGCGCATCAC
AACTAAGCCAATCCACGGAT

Product: glycerol-3-phosphate dehydrogenase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 507; Mature: 506

Protein sequence:

>507_residues
MTQPNRYDLLVVGGGINGAGIARDAAGRGLSVMLCEQDDLASHTSSSSTKLIHGGLRYLEYNEFGLVRKALQERETLLRA
APHIMWPLRFVMPHMPNLRPAWLIRIGLFLYDHLAKRELLPGSRGIDMRRHAAGAPLIDSIKRGFVYSDGWVDDARLVVL
NAMDAKERGAEILTRTKLVSAERRGDEWEARLQHADGSIRVVHARAIANAAGPWVGEVLHGALGRGAHHSVRLVKGSHII
THRLFDHDHAYIFQNPDKRIIFAIPYEHDFTLIGTTDVEYTNDPAKVAIDRDETQYLCDSINRYFKRKISPADVHWTYSG
VRPLLEDENAANASAVTRDYRLELDDGAGAPLLSVFGGKITTFRKLAEEAGDMLCRALGRDAKTWTAGVALPGGDIADAK
FDGFASAFAKRHPWLPAALARRYARAYGTRAERVVDGAKSLADLGAEIAPGIHDAELRYLRDAEWATCAQDVLWRRSKLG
LHVAPGTLDAVTAAVDAWFAAAHAPHA

Sequences:

>Translated_507_residues
MTQPNRYDLLVVGGGINGAGIARDAAGRGLSVMLCEQDDLASHTSSSSTKLIHGGLRYLEYNEFGLVRKALQERETLLRA
APHIMWPLRFVMPHMPNLRPAWLIRIGLFLYDHLAKRELLPGSRGIDMRRHAAGAPLIDSIKRGFVYSDGWVDDARLVVL
NAMDAKERGAEILTRTKLVSAERRGDEWEARLQHADGSIRVVHARAIANAAGPWVGEVLHGALGRGAHHSVRLVKGSHII
THRLFDHDHAYIFQNPDKRIIFAIPYEHDFTLIGTTDVEYTNDPAKVAIDRDETQYLCDSINRYFKRKISPADVHWTYSG
VRPLLEDENAANASAVTRDYRLELDDGAGAPLLSVFGGKITTFRKLAEEAGDMLCRALGRDAKTWTAGVALPGGDIADAK
FDGFASAFAKRHPWLPAALARRYARAYGTRAERVVDGAKSLADLGAEIAPGIHDAELRYLRDAEWATCAQDVLWRRSKLG
LHVAPGTLDAVTAAVDAWFAAAHAPHA
>Mature_506_residues
TQPNRYDLLVVGGGINGAGIARDAAGRGLSVMLCEQDDLASHTSSSSTKLIHGGLRYLEYNEFGLVRKALQERETLLRAA
PHIMWPLRFVMPHMPNLRPAWLIRIGLFLYDHLAKRELLPGSRGIDMRRHAAGAPLIDSIKRGFVYSDGWVDDARLVVLN
AMDAKERGAEILTRTKLVSAERRGDEWEARLQHADGSIRVVHARAIANAAGPWVGEVLHGALGRGAHHSVRLVKGSHIIT
HRLFDHDHAYIFQNPDKRIIFAIPYEHDFTLIGTTDVEYTNDPAKVAIDRDETQYLCDSINRYFKRKISPADVHWTYSGV
RPLLEDENAANASAVTRDYRLELDDGAGAPLLSVFGGKITTFRKLAEEAGDMLCRALGRDAKTWTAGVALPGGDIADAKF
DGFASAFAKRHPWLPAALARRYARAYGTRAERVVDGAKSLADLGAEIAPGIHDAELRYLRDAEWATCAQDVLWRRSKLGL
HVAPGTLDAVTAAVDAWFAAAHAPHA

Specific function: Conversion Of Glycerol 3-Phosphate To Dihydroxyacetone. Uses Molecular Oxygen Or Nitrate As Electron Acceptor. [C]

COG id: COG0578

COG function: function code C; Glycerol-3-phosphate dehydrogenase

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the FAD-dependent glycerol-3-phosphate dehydrogenase family [H]

Homologues:

Organism=Homo sapiens, GI285002233, Length=515, Percent_Identity=28.1553398058252, Blast_Score=167, Evalue=2e-41,
Organism=Homo sapiens, GI285002231, Length=515, Percent_Identity=28.1553398058252, Blast_Score=167, Evalue=2e-41,
Organism=Escherichia coli, GI2367226, Length=454, Percent_Identity=49.7797356828194, Blast_Score=433, Evalue=1e-122,
Organism=Escherichia coli, GI1788574, Length=491, Percent_Identity=28.1059063136456, Blast_Score=105, Evalue=6e-24,
Organism=Caenorhabditis elegans, GI115534726, Length=512, Percent_Identity=29.1015625, Blast_Score=159, Evalue=5e-39,
Organism=Caenorhabditis elegans, GI17509253, Length=525, Percent_Identity=28.3809523809524, Blast_Score=149, Evalue=4e-36,
Organism=Saccharomyces cerevisiae, GI6322036, Length=569, Percent_Identity=27.4165202108963, Blast_Score=146, Evalue=7e-36,
Organism=Drosophila melanogaster, GI161077125, Length=530, Percent_Identity=29.2452830188679, Blast_Score=164, Evalue=2e-40,
Organism=Drosophila melanogaster, GI24653942, Length=530, Percent_Identity=29.2452830188679, Blast_Score=164, Evalue=2e-40,
Organism=Drosophila melanogaster, GI24653944, Length=530, Percent_Identity=29.2452830188679, Blast_Score=164, Evalue=2e-40,
Organism=Drosophila melanogaster, GI20130025, Length=530, Percent_Identity=29.2452830188679, Blast_Score=164, Evalue=2e-40,
Organism=Drosophila melanogaster, GI24586295, Length=384, Percent_Identity=28.125, Blast_Score=100, Evalue=5e-21,
Organism=Drosophila melanogaster, GI19921278, Length=518, Percent_Identity=24.7104247104247, Blast_Score=95, Evalue=1e-19,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006076
- InterPro:   IPR000447 [H]

Pfam domain/function: PF01266 DAO [H]

EC number: =1.1.5.3 [H]

Molecular weight: Translated: 55868; Mature: 55737

Theoretical pI: Translated: 8.09; Mature: 8.09

Prosite motif: PS00977 FAD_G3PDH_1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTQPNRYDLLVVGGGINGAGIARDAAGRGLSVMLCEQDDLASHTSSSSTKLIHGGLRYLE
CCCCCCEEEEEEECCCCCCCCCHHCCCCCCEEEEECCCCHHCCCCCCCCEEEECCHHHEE
YNEFGLVRKALQERETLLRAAPHIMWPLRFVMPHMPNLRPAWLIRIGLFLYDHLAKRELL
ECHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHCC
PGSRGIDMRRHAAGAPLIDSIKRGFVYSDGWVDDARLVVLNAMDAKERGAEILTRTKLVS
CCCCCCCHHHHHCCCCHHHHHHHCCEECCCCCCCCEEEEEECCCCHHHHHHHHHHHHHHH
AERRGDEWEARLQHADGSIRVVHARAIANAAGPWVGEVLHGALGRGAHHSVRLVKGSHII
HHHCCCHHHHHHHCCCCCEEEEEEHHHHCCCCCHHHHHHHHHHCCCCCCEEEEEECCEEE
THRLFDHDHAYIFQNPDKRIIFAIPYEHDFTLIGTTDVEYTNDPAKVAIDRDETQYLCDS
EEEHHCCCCEEEEECCCCEEEEEECCCCCEEEEECCCCEECCCCCEEEECCCHHHHHHHH
INRYFKRKISPADVHWTYSGVRPLLEDENAANASAVTRDYRLELDDGAGAPLLSVFGGKI
HHHHHHHCCCCCCEEEECCCCCCHHCCCCCCCHHHCCEEEEEEECCCCCCCHHHHHCCCH
TTFRKLAEEAGDMLCRALGRDAKTWTAGVALPGGDIADAKFDGFASAFAKRHPWLPAALA
HHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCCCCCCCHHHHHHHHHHCCCCCHHHHH
RRYARAYGTRAERVVDGAKSLADLGAEIAPGIHDAELRYLRDAEWATCAQDVLWRRSKLG
HHHHHHHCCHHHHHHHHHHHHHHCCHHHCCCCCHHHHHHHHCCCHHHHHHHHHHHHHHCC
LHVAPGTLDAVTAAVDAWFAAAHAPHA
EEECCCCHHHHHHHHHHHHHHHCCCCC
>Mature Secondary Structure 
TQPNRYDLLVVGGGINGAGIARDAAGRGLSVMLCEQDDLASHTSSSSTKLIHGGLRYLE
CCCCCEEEEEEECCCCCCCCCHHCCCCCCEEEEECCCCHHCCCCCCCCEEEECCHHHEE
YNEFGLVRKALQERETLLRAAPHIMWPLRFVMPHMPNLRPAWLIRIGLFLYDHLAKRELL
ECHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHCC
PGSRGIDMRRHAAGAPLIDSIKRGFVYSDGWVDDARLVVLNAMDAKERGAEILTRTKLVS
CCCCCCCHHHHHCCCCHHHHHHHCCEECCCCCCCCEEEEEECCCCHHHHHHHHHHHHHHH
AERRGDEWEARLQHADGSIRVVHARAIANAAGPWVGEVLHGALGRGAHHSVRLVKGSHII
HHHCCCHHHHHHHCCCCCEEEEEEHHHHCCCCCHHHHHHHHHHCCCCCCEEEEEECCEEE
THRLFDHDHAYIFQNPDKRIIFAIPYEHDFTLIGTTDVEYTNDPAKVAIDRDETQYLCDS
EEEHHCCCCEEEEECCCCEEEEEECCCCCEEEEECCCCEECCCCCEEEECCCHHHHHHHH
INRYFKRKISPADVHWTYSGVRPLLEDENAANASAVTRDYRLELDDGAGAPLLSVFGGKI
HHHHHHHCCCCCCEEEECCCCCCHHCCCCCCCHHHCCEEEEEEECCCCCCCHHHHHCCCH
TTFRKLAEEAGDMLCRALGRDAKTWTAGVALPGGDIADAKFDGFASAFAKRHPWLPAALA
HHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCCCCCCCHHHHHHHHHHCCCCCHHHHH
RRYARAYGTRAERVVDGAKSLADLGAEIAPGIHDAELRYLRDAEWATCAQDVLWRRSKLG
HHHHHHHCCHHHHHHHHHHHHHHCCHHHCCCCCHHHHHHHHCCCHHHHHHHHHHHHHHCC
LHVAPGTLDAVTAAVDAWFAAAHAPHA
EEECCCCHHHHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8157588; 10984043 [H]