| Definition | Burkholderia cenocepacia HI2424 chromosome 1, complete sequence. |
|---|---|
| Accession | NC_008542 |
| Length | 3,483,902 |
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The map label for this gene is yjbE [H]
Identifier: 116690667
GI number: 116690667
Start: 2933358
End: 2934062
Strand: Reverse
Name: yjbE [H]
Synonym: Bcen2424_2647
Alternate gene names: 116690667
Gene position: 2934062-2933358 (Counterclockwise)
Preceding gene: 116690668
Following gene: 116690666
Centisome position: 84.22
GC content: 67.8
Gene sequence:
>705_bases ATGCTCGAATTCCTGACCTCGCTGCACTGGGGCGCCATTCTCCAGATTGTCATCATTGATATCCTGCTCGGCGGCGACAA CGCGGTCGTGATCGCGCTTGCGTGCCGCAACCTGCCGGCGAACCAGCGGCTGCGCGGCGTCGTCTGGGGCACTGCGGGGG CGATCCTGCTGCGTGTCGCGCTGATCACGTTCGCGGTCGCGCTGCTCGACGTGCCGTTCCTGAAGCTCGGCGGCGGCCTG CTGCTGCTGTGGATCGGCATCAAGCTGATGGCGCCGGCCGCCGACGCGCACGACAACATCAAGCCGGCCGACCGGCTGTG GGACGCCGTGAAGACGATCGTGATCGCCGACGCGGTCATGAGCCTCGACAACGTGATCGCGATCGCCGGCGCGGCCGAGC AGGCCGATCCGTCGCACCGGATCGCGCTCGTGATCTTCGGGCTCATCGTCAGCGTGCCGATCATCGTGTGGGGCAGCACG CTGGTGCTGAAGCTGCTCGACCGTTTCCCGGTCGTCGTGGCATTCGGCGCCGGGCTGCTCGGCTGGATCGCGGGCGGCTT GATCGTGAACGACCCGGTCGGCGACCGCTGGCCGGTGCTTGATGCGCCGGAAGTGGTCTACGGCGCGAGCATCGTCGGCG CGTTGTTCGTCGTCGCGATCGGTTATGCGCTCAGGAAACGCCGCAGCGTGCCGCACGCGCACTGA
Upstream 100 bases:
>100_bases TGCTCCCGCAATGAATTCGTAAGCACCGGGCATGCGTTCTGCATGCGCCTACGATGAACCGGGCCGCCCGCGAGGCGGCC GTTGTCCTTTCCTCTCCGCT
Downstream 100 bases:
>100_bases CTGGCCATCCGGCTGACTGCCGGCTTCGCGGCCCGCTGGCTACGATCGAGACGCCTGCCTGTATCGGCAGGCGTTTTTCG TTTCCGGAGCCTGTTCATGT
Product: integral membrane protein TerC
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 234; Mature: 234
Protein sequence:
>234_residues MLEFLTSLHWGAILQIVIIDILLGGDNAVVIALACRNLPANQRLRGVVWGTAGAILLRVALITFAVALLDVPFLKLGGGL LLLWIGIKLMAPAADAHDNIKPADRLWDAVKTIVIADAVMSLDNVIAIAGAAEQADPSHRIALVIFGLIVSVPIIVWGST LVLKLLDRFPVVVAFGAGLLGWIAGGLIVNDPVGDRWPVLDAPEVVYGASIVGALFVVAIGYALRKRRSVPHAH
Sequences:
>Translated_234_residues MLEFLTSLHWGAILQIVIIDILLGGDNAVVIALACRNLPANQRLRGVVWGTAGAILLRVALITFAVALLDVPFLKLGGGL LLLWIGIKLMAPAADAHDNIKPADRLWDAVKTIVIADAVMSLDNVIAIAGAAEQADPSHRIALVIFGLIVSVPIIVWGST LVLKLLDRFPVVVAFGAGLLGWIAGGLIVNDPVGDRWPVLDAPEVVYGASIVGALFVVAIGYALRKRRSVPHAH >Mature_234_residues MLEFLTSLHWGAILQIVIIDILLGGDNAVVIALACRNLPANQRLRGVVWGTAGAILLRVALITFAVALLDVPFLKLGGGL LLLWIGIKLMAPAADAHDNIKPADRLWDAVKTIVIADAVMSLDNVIAIAGAAEQADPSHRIALVIFGLIVSVPIIVWGST LVLKLLDRFPVVVAFGAGLLGWIAGGLIVNDPVGDRWPVLDAPEVVYGASIVGALFVVAIGYALRKRRSVPHAH
Specific function: Unknown
COG id: COG0861
COG function: function code P; Membrane protein TerC, possibly involved in tellurium resistance
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the terC family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005496 - InterPro: IPR022301 [H]
Pfam domain/function: PF03741 TerC [H]
EC number: NA
Molecular weight: Translated: 24751; Mature: 24751
Theoretical pI: Translated: 7.73; Mature: 7.73
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 1.7 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 1.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLEFLTSLHWGAILQIVIIDILLGGDNAVVIALACRNLPANQRLRGVVWGTAGAILLRVA CHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEEECCCCCCCCHHEEEEHHHHHHHHHHH LITFAVALLDVPFLKLGGGLLLLWIGIKLMAPAADAHDNIKPADRLWDAVKTIVIADAVM HHHHHHHHHHCCHHHHCCHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHH SLDNVIAIAGAAEQADPSHRIALVIFGLIVSVPIIVWGSTLVLKLLDRFPVVVAFGAGLL HHHHHHEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHH GWIAGGLIVNDPVGDRWPVLDAPEVVYGASIVGALFVVAIGYALRKRRSVPHAH HHHHCCEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC >Mature Secondary Structure MLEFLTSLHWGAILQIVIIDILLGGDNAVVIALACRNLPANQRLRGVVWGTAGAILLRVA CHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEEECCCCCCCCHHEEEEHHHHHHHHHHH LITFAVALLDVPFLKLGGGLLLLWIGIKLMAPAADAHDNIKPADRLWDAVKTIVIADAVM HHHHHHHHHHCCHHHHCCHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHH SLDNVIAIAGAAEQADPSHRIALVIFGLIVSVPIIVWGSTLVLKLLDRFPVVVAFGAGLL HHHHHHEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHH GWIAGGLIVNDPVGDRWPVLDAPEVVYGASIVGALFVVAIGYALRKRRSVPHAH HHHHCCEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 9384377 [H]