| Definition | Burkholderia cenocepacia HI2424 chromosome 1, complete sequence. |
|---|---|
| Accession | NC_008542 |
| Length | 3,483,902 |
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The map label for this gene is 116690649
Identifier: 116690649
GI number: 116690649
Start: 2913771
End: 2914094
Strand: Reverse
Name: 116690649
Synonym: Bcen2424_2629
Alternate gene names: NA
Gene position: 2914094-2913771 (Counterclockwise)
Preceding gene: 116690650
Following gene: 116690648
Centisome position: 83.64
GC content: 69.75
Gene sequence:
>324_bases ATGAGCGCGACCGAGATCTGGATCGTCATCGTCGGGATGACGATCGTCACGGCCGTCACGCGCGCGCTGTTCCTGATCGG CGGCGAGCGCACGGTCTTGCCCGAACGCGCGCAGCGCGCGCTGCGCTACGCGCCGGCCGCCGCGCTGGTCGCCGTCGTGC TGCCCGACGTGCTCGAAACGCCGGCCGGGCTGTCGTTCGCGCTGTCCAACCATCCGTTCTACGCGGCGCTCGCCGGCCTC GGCTGGTTTTTGTGGCGGCGCAGCATGCTCGGCACGATCGTCGTCGGCATGCTCGTGTTCACCGCGCTCCGCCTGATCTT CTGA
Upstream 100 bases:
>100_bases TGCTCGCCGCGCTCGCGGCCGGCTGCACAGCCGATTTCTTCGTCGAGCGGGCCGACTGGCGGCGCATCCGTACCGAAACC GTGCACGAAAAGGACATGGA
Downstream 100 bases:
>100_bases TGGGCCGCCGTTCCGGCCTGGCCGGCGCCGCCCGGTTGCGCGCGCGTATTGCTGCACTGCCGCAATGCGTCCGTGCCGGC GCGCGATCCCAAATAGGCGG
Product: branched-chain amino acid transport
Products: NA
Alternate protein names: Branched-Chain Amino Acid Transport Protein AzlD; Membrane Component COG
Number of amino acids: Translated: 107; Mature: 106
Protein sequence:
>107_residues MSATEIWIVIVGMTIVTAVTRALFLIGGERTVLPERAQRALRYAPAAALVAVVLPDVLETPAGLSFALSNHPFYAALAGL GWFLWRRSMLGTIVVGMLVFTALRLIF
Sequences:
>Translated_107_residues MSATEIWIVIVGMTIVTAVTRALFLIGGERTVLPERAQRALRYAPAAALVAVVLPDVLETPAGLSFALSNHPFYAALAGL GWFLWRRSMLGTIVVGMLVFTALRLIF >Mature_106_residues SATEIWIVIVGMTIVTAVTRALFLIGGERTVLPERAQRALRYAPAAALVAVVLPDVLETPAGLSFALSNHPFYAALAGLG WFLWRRSMLGTIVVGMLVFTALRLIF
Specific function: Unknown
COG id: COG4392
COG function: function code S; Predicted membrane protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 11600; Mature: 11469
Theoretical pI: Translated: 10.99; Mature: 10.99
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.7 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSATEIWIVIVGMTIVTAVTRALFLIGGERTVLPERAQRALRYAPAAALVAVVLPDVLET CCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCC PAGLSFALSNHPFYAALAGLGWFLWRRSMLGTIVVGMLVFTALRLIF CCCCEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC >Mature Secondary Structure SATEIWIVIVGMTIVTAVTRALFLIGGERTVLPERAQRALRYAPAAALVAVVLPDVLET CCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCC PAGLSFALSNHPFYAALAGLGWFLWRRSMLGTIVVGMLVFTALRLIF CCCCEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA