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The map label for this gene is glxA [H]

Identifier: 116690632

GI number: 116690632

Start: 2894449

End: 2895474

Strand: Direct

Name: glxA [H]

Synonym: Bcen2424_2612

Alternate gene names: 116690632

Gene position: 2894449-2895474 (Clockwise)

Preceding gene: 116690630

Following gene: 116690639

Centisome position: 83.08

GC content: 72.71

Gene sequence:

>1026_bases
ATGCTCGCCACCGCCCCGTTCACGCCATCCACCCCATCCGCCCCGTCCGTACCGACCGTCGTCGCCGTGATCGCGTACGA
CGGCATCAGCCCGTTCCATCTGTCGGTGCCGTCGGTCGTGTTCGGCAAGGAACGCGACGCGGCCGCGTCGCCCGCATTCG
AGTTCCGCGTCTGCTCGGCCGAGCGCGGCCCGCTCGCGACGACGGGTGGCTTCACGATCACCGCACCGTACGGGCTCGAT
GCGCTCGACGATGCAGACATCGTCATCGTGCCTTCCTGGCGGGACCCGGACGAAGTGCCGCCCGACGCGCTGCTCGATGC
GGTCCGCGCGGTCGCCGCGCGCGGCGCGGAGCTCGTCGGCCTGTGCCTCGGCGCCTACGTGCTCGCCGCGGCCGGCCTGC
TCGAGGGCCGCCCGGCCACCACGCACTGGGCGTGGGCCGACGATTTCGCCCGGCGCTTTCCGCGCGTGAAACTCGATCCC
GACGTGCTGTACGTGAACGACGGCAACCTGATGACGTCGGCCGGCACGGCGGCAGGCCTCGACTGCTGCCTGCACGTCGT
GCGGCGGCGCTTCGGCTCGGACGCCGCGAACCGGATCGCGCGCCGCCTCGTGATCCCGCCGCACCGCCAGGGCGGACAGG
CCCAGTACGTGCCGCAGCCAGTCGCCGCGCATCCGCGCGACGCGCGGCTCGCGGGGTTGCTCGACTGGGTGCGCGCCCAT
CTCGACGCCGCGCACAGCGTCGATTCGCTCGCCGAACGCGTGCTCATGAGCCGGCGCACGTTCACGCGCCACTTCCGCCA
GGCGACGGGCACGACCGTCACCGCATGGCTGCAGGCCGAGCGGCTCGCGCGCGCGCAGCATCTGCTCGAAACCACCGGAC
AATCGATCGACGCGATCGCGCAGGCAGCCGGCTACGGCTCGAGCGTGTCGCTGCGCCAGCATTTCGCGGGCGCGCTCGGC
ACGTCGCCGTCTGCGTATCGAAGGGAATTTCGCGGCGCCGGAGCCGGTGCCGACGCGGCGCAGTGA

Upstream 100 bases:

>100_bases
AGTGCGATGCGATGCATTGTCGAGCCGGGCGGCTTGTGCCGATAGTGGCCCGATAGCCATTCTTCGATAGAATCGGGCCA
TCGCCTTGCCGGAGCCCGTC

Downstream 100 bases:

>100_bases
CGCCCGCTGCGGGCCGCGAACAGGCCGGGAAGCGGAACCGGGCGGCCGATCGCCGATCAGCCGCCGTTGATCCAGCGCGC
CGCGTACAGCAGCAGCGCGA

Product: AraC family transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 341; Mature: 341

Protein sequence:

>341_residues
MLATAPFTPSTPSAPSVPTVVAVIAYDGISPFHLSVPSVVFGKERDAAASPAFEFRVCSAERGPLATTGGFTITAPYGLD
ALDDADIVIVPSWRDPDEVPPDALLDAVRAVAARGAELVGLCLGAYVLAAAGLLEGRPATTHWAWADDFARRFPRVKLDP
DVLYVNDGNLMTSAGTAAGLDCCLHVVRRRFGSDAANRIARRLVIPPHRQGGQAQYVPQPVAAHPRDARLAGLLDWVRAH
LDAAHSVDSLAERVLMSRRTFTRHFRQATGTTVTAWLQAERLARAQHLLETTGQSIDAIAQAAGYGSSVSLRQHFAGALG
TSPSAYRREFRGAGAGADAAQ

Sequences:

>Translated_341_residues
MLATAPFTPSTPSAPSVPTVVAVIAYDGISPFHLSVPSVVFGKERDAAASPAFEFRVCSAERGPLATTGGFTITAPYGLD
ALDDADIVIVPSWRDPDEVPPDALLDAVRAVAARGAELVGLCLGAYVLAAAGLLEGRPATTHWAWADDFARRFPRVKLDP
DVLYVNDGNLMTSAGTAAGLDCCLHVVRRRFGSDAANRIARRLVIPPHRQGGQAQYVPQPVAAHPRDARLAGLLDWVRAH
LDAAHSVDSLAERVLMSRRTFTRHFRQATGTTVTAWLQAERLARAQHLLETTGQSIDAIAQAAGYGSSVSLRQHFAGALG
TSPSAYRREFRGAGAGADAAQ
>Mature_341_residues
MLATAPFTPSTPSAPSVPTVVAVIAYDGISPFHLSVPSVVFGKERDAAASPAFEFRVCSAERGPLATTGGFTITAPYGLD
ALDDADIVIVPSWRDPDEVPPDALLDAVRAVAARGAELVGLCLGAYVLAAAGLLEGRPATTHWAWADDFARRFPRVKLDP
DVLYVNDGNLMTSAGTAAGLDCCLHVVRRRFGSDAANRIARRLVIPPHRQGGQAQYVPQPVAAHPRDARLAGLLDWVRAH
LDAAHSVDSLAERVLMSRRTFTRHFRQATGTTVTAWLQAERLARAQHLLETTGQSIDAIAQAAGYGSSVSLRQHFAGALG
TSPSAYRREFRGAGAGADAAQ

Specific function: Regulatory Protein For The Xylbafghr Operon. [C]

COG id: COG4977

COG function: function code K; Transcriptional regulator containing an amidase domain and an AraC-type DNA-binding HTH domain

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH araC/xylS-type DNA-binding domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009057
- InterPro:   IPR012287
- InterPro:   IPR018062
- InterPro:   IPR020449
- InterPro:   IPR018060
- InterPro:   IPR002818 [H]

Pfam domain/function: PF01965 DJ-1_PfpI; PF00165 HTH_AraC [H]

EC number: NA

Molecular weight: Translated: 36176; Mature: 36176

Theoretical pI: Translated: 7.67; Mature: 7.67

Prosite motif: PS00041 HTH_ARAC_FAMILY_1 ; PS01124 HTH_ARAC_FAMILY_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
0.9 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLATAPFTPSTPSAPSVPTVVAVIAYDGISPFHLSVPSVVFGKERDAAASPAFEFRVCSA
CCCCCCCCCCCCCCCCCHHEEEEEEECCCCCCEECCCHHEECCCCCCCCCCCEEEEEECC
ERGPLATTGGFTITAPYGLDALDDADIVIVPSWRDPDEVPPDALLDAVRAVAARGAELVG
CCCCCEECCCEEEECCCCCCCCCCCCEEEECCCCCCCCCCHHHHHHHHHHHHHCCHHHHH
LCLGAYVLAAAGLLEGRPATTHWAWADDFARRFPRVKLDPDVLYVNDGNLMTSAGTAAGL
HHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHCCCCEECCCEEEEECCCEEECCCCHHHH
DCCLHVVRRRFGSDAANRIARRLVIPPHRQGGQAQYVPQPVAAHPRDARLAGLLDWVRAH
HHHHHHHHHHHCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHH
LDAAHSVDSLAERVLMSRRTFTRHFRQATGTTVTAWLQAERLARAQHLLETTGQSIDAIA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHH
QAAGYGSSVSLRQHFAGALGTSPSAYRREFRGAGAGADAAQ
HHHCCCCCHHHHHHHHHHHCCCCHHHHHHHCCCCCCCCCCC
>Mature Secondary Structure
MLATAPFTPSTPSAPSVPTVVAVIAYDGISPFHLSVPSVVFGKERDAAASPAFEFRVCSA
CCCCCCCCCCCCCCCCCHHEEEEEEECCCCCCEECCCHHEECCCCCCCCCCCEEEEEECC
ERGPLATTGGFTITAPYGLDALDDADIVIVPSWRDPDEVPPDALLDAVRAVAARGAELVG
CCCCCEECCCEEEECCCCCCCCCCCCEEEECCCCCCCCCCHHHHHHHHHHHHHCCHHHHH
LCLGAYVLAAAGLLEGRPATTHWAWADDFARRFPRVKLDPDVLYVNDGNLMTSAGTAAGL
HHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHCCCCEECCCEEEEECCCEEECCCCHHHH
DCCLHVVRRRFGSDAANRIARRLVIPPHRQGGQAQYVPQPVAAHPRDARLAGLLDWVRAH
HHHHHHHHHHHCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHH
LDAAHSVDSLAERVLMSRRTFTRHFRQATGTTVTAWLQAERLARAQHLLETTGQSIDAIA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHH
QAAGYGSSVSLRQHFAGALGTSPSAYRREFRGAGAGADAAQ
HHHCCCCCHHHHHHHHHHHCCCCHHHHHHHCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11481430 [H]