| Definition | Burkholderia cenocepacia HI2424 chromosome 1, complete sequence. |
|---|---|
| Accession | NC_008542 |
| Length | 3,483,902 |
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The map label for this gene is estB [H]
Identifier: 116690609
GI number: 116690609
Start: 2866762
End: 2867958
Strand: Reverse
Name: estB [H]
Synonym: Bcen2424_2589
Alternate gene names: 116690609
Gene position: 2867958-2866762 (Counterclockwise)
Preceding gene: 116690611
Following gene: 116690608
Centisome position: 82.32
GC content: 72.26
Gene sequence:
>1197_bases ATGTCATCACTGCCTGTCACCGCCCGCCGCGCCGAACCGGATGCCGCGCTGCGCGCCCGGCTCGATGCCGTGCTCGACCG CGCGCTGGCCGATGCGCGCGCGGTCGGCGCGGTCGTGCTGGTCGCGCGCGACGGCGAATTGCGTTATGCACGCGCGGCCG GGCTGGCCGATCGCGAAGCCGGCACGCCGATGCGCGAGGACACGCTGTTCCGGCTCGCGTCGGTATCCAAGCCGATCGTG ACGGCCGCCGCGATGCGGCTGGTCGCGGCATCGAAGATCGGGCTCGACGAGCCGGTCGCGCGCTGGCTGCCCGCGTTCAC GCCGACGCTCGCGGACGGCACGCCGGCGAACATCACGCTGCGGCATCTGCTGTCGCACACGGCCGGGCTCGGCTATCGCT TTCTCGAAGCCGACGCCGACGGCCCGTATGCACGCGCGGGCGTGTCCGACGGGATGGATCGCGCGAGCCTGTCGCTCGCC GAGAACGTGCGGCGCATCGCCGGCGTGCCGCTGCAGTTCGCGCCCGGCACGTCGTGGGGCTACTCGCTTGCGACCGACGT GGTCGGCGCGCTGATCGAGGCGGTCGACGGCCGCCCGCTCGCCGACGCCGTGGCGGCGCTCGTGACGACGCCGCTCGGGA TGGCCGACACGGCATTTTTCACGCATGACGCGGCGCGTCTGGCGACGCCTTACGTCAGCACGCCCGACGTGCCGCGCCGG ATGGCGGACGACGATCTCGTGCCGGTGTTCGACGGCACGGTCGGTATCCGCTTCGAGCCGGCGCGCGCGTTCGACGCGAC CGCGTGGCCGTCGGGCGGCGCGGGCATGGTCGGCACCGCGCACGATTGCCTGACGCTGCTCGATACGCTGCGCACGGGCC TCGACGGCTGGCTCGCACCGCGCTGGATCGACGAGATGGCGCGGGTGCAGCCGGGCGCGCACGACTTGCCGGATGCGCCG GGATTCGGTTTCGGACTCGGTTTTTCCGTGCTGCATGACCCGGTGGCCGCGCAATCGCCGGAGTCGGTCGGCACCTGGCG CTGGGGCGGTGCGTACGGGCATGCGTGGTTCGTCGACCGCGCAGCCGGGCTGACGGTCGTCGCACTGACCAATACGTTAT ACGAAGGGATGCACGGGCGCATCGTCACCGACGTGCGCGATGCGGTGTATGGCATCGACGACCGGAGCGCGGCATGA
Upstream 100 bases:
>100_bases TGCGGACACCCATGTCCGGAGTGTCCGGAACTCTAACCCGATTTTTCTTCTCGTGCCGGCTCCCTACGATGGGCGTTCCT TCACTGTTCGAGGTCACGCC
Downstream 100 bases:
>100_bases GCGAGTGCGTATCCGTCTCCGACCGCGCTGTCGATCGTGCGGCAGATTCGTCCGCGCCGGCTCGTGCACGTCTGCCCGTC GCGAACCTGTTCGCGCTGGC
Product: beta-lactamase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 398; Mature: 397
Protein sequence:
>398_residues MSSLPVTARRAEPDAALRARLDAVLDRALADARAVGAVVLVARDGELRYARAAGLADREAGTPMREDTLFRLASVSKPIV TAAAMRLVAASKIGLDEPVARWLPAFTPTLADGTPANITLRHLLSHTAGLGYRFLEADADGPYARAGVSDGMDRASLSLA ENVRRIAGVPLQFAPGTSWGYSLATDVVGALIEAVDGRPLADAVAALVTTPLGMADTAFFTHDAARLATPYVSTPDVPRR MADDDLVPVFDGTVGIRFEPARAFDATAWPSGGAGMVGTAHDCLTLLDTLRTGLDGWLAPRWIDEMARVQPGAHDLPDAP GFGFGLGFSVLHDPVAAQSPESVGTWRWGGAYGHAWFVDRAAGLTVVALTNTLYEGMHGRIVTDVRDAVYGIDDRSAA
Sequences:
>Translated_398_residues MSSLPVTARRAEPDAALRARLDAVLDRALADARAVGAVVLVARDGELRYARAAGLADREAGTPMREDTLFRLASVSKPIV TAAAMRLVAASKIGLDEPVARWLPAFTPTLADGTPANITLRHLLSHTAGLGYRFLEADADGPYARAGVSDGMDRASLSLA ENVRRIAGVPLQFAPGTSWGYSLATDVVGALIEAVDGRPLADAVAALVTTPLGMADTAFFTHDAARLATPYVSTPDVPRR MADDDLVPVFDGTVGIRFEPARAFDATAWPSGGAGMVGTAHDCLTLLDTLRTGLDGWLAPRWIDEMARVQPGAHDLPDAP GFGFGLGFSVLHDPVAAQSPESVGTWRWGGAYGHAWFVDRAAGLTVVALTNTLYEGMHGRIVTDVRDAVYGIDDRSAA >Mature_397_residues SSLPVTARRAEPDAALRARLDAVLDRALADARAVGAVVLVARDGELRYARAAGLADREAGTPMREDTLFRLASVSKPIVT AAAMRLVAASKIGLDEPVARWLPAFTPTLADGTPANITLRHLLSHTAGLGYRFLEADADGPYARAGVSDGMDRASLSLAE NVRRIAGVPLQFAPGTSWGYSLATDVVGALIEAVDGRPLADAVAALVTTPLGMADTAFFTHDAARLATPYVSTPDVPRRM ADDDLVPVFDGTVGIRFEPARAFDATAWPSGGAGMVGTAHDCLTLLDTLRTGLDGWLAPRWIDEMARVQPGAHDLPDAPG FGFGLGFSVLHDPVAAQSPESVGTWRWGGAYGHAWFVDRAAGLTVVALTNTLYEGMHGRIVTDVRDAVYGIDDRSAA
Specific function: Acts on short-chain (C4-C6) fatty acid esters and triglycerides, including tertiary alcohol esters. Activity on p- nitrophenyl esters is generally higher than on o-nitrophenyl esters. Lacks beta-lactamase activity; it hydrolyzes the ester bond of cephalos
COG id: COG1680
COG function: function code V; Beta-lactamase class C and other penicillin binding proteins
Gene ontology:
Cell location: Cytoplasm (Probable) [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the class-A beta-lactamase family [H]
Homologues:
Organism=Homo sapiens, GI26051231, Length=115, Percent_Identity=34.7826086956522, Blast_Score=68, Evalue=2e-11, Organism=Homo sapiens, GI26051233, Length=115, Percent_Identity=34.7826086956522, Blast_Score=67, Evalue=4e-11, Organism=Escherichia coli, GI87082101, Length=398, Percent_Identity=24.6231155778894, Blast_Score=75, Evalue=7e-15, Organism=Caenorhabditis elegans, GI17550934, Length=198, Percent_Identity=30.3030303030303, Blast_Score=79, Evalue=5e-15,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR012338 - InterPro: IPR001466 - InterPro: IPR000871 [H]
Pfam domain/function: PF00144 Beta-lactamase [H]
EC number: NA
Molecular weight: Translated: 41934; Mature: 41803
Theoretical pI: Translated: 4.98; Mature: 4.98
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSSLPVTARRAEPDAALRARLDAVLDRALADARAVGAVVLVARDGELRYARAAGLADREA CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCCEEHHHHCCCCCCCC GTPMREDTLFRLASVSKPIVTAAAMRLVAASKIGLDEPVARWLPAFTPTLADGTPANITL CCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCHHHHHHCCCCCCCCCCCCCHHHH RHLLSHTAGLGYRFLEADADGPYARAGVSDGMDRASLSLAENVRRIAGVPLQFAPGTSWG HHHHHHHCCCCEEEEECCCCCCEECCCCCCCCHHHHHHHHHHHHHHHCCCEEECCCCCCC YSLATDVVGALIEAVDGRPLADAVAALVTTPLGMADTAFFTHDAARLATPYVSTPDVPRR HHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCHHHHHHHHCHHHHCCCCCCCCCCCHH MADDDLVPVFDGTVGIRFEPARAFDATAWPSGGAGMVGTAHDCLTLLDTLRTGLDGWLAP HCCCCCEEEECCCEEEEECCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCH RWIDEMARVQPGAHDLPDAPGFGFGLGFSVLHDPVAAQSPESVGTWRWGGAYGHAWFVDR HHHHHHHHCCCCCCCCCCCCCCCHHCCHHHHHCCHHCCCCCCCCCEECCCCCCCHHEEHH AAGLTVVALTNTLYEGMHGRIVTDVRDAVYGIDDRSAA CCCEEEEEEHHHHHHCCCCCCHHHHHHHHHCCCCCCCC >Mature Secondary Structure SSLPVTARRAEPDAALRARLDAVLDRALADARAVGAVVLVARDGELRYARAAGLADREA CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCCEEHHHHCCCCCCCC GTPMREDTLFRLASVSKPIVTAAAMRLVAASKIGLDEPVARWLPAFTPTLADGTPANITL CCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCHHHHHHCCCCCCCCCCCCCHHHH RHLLSHTAGLGYRFLEADADGPYARAGVSDGMDRASLSLAENVRRIAGVPLQFAPGTSWG HHHHHHHCCCCEEEEECCCCCCEECCCCCCCCHHHHHHHHHHHHHHHCCCEEECCCCCCC YSLATDVVGALIEAVDGRPLADAVAALVTTPLGMADTAFFTHDAARLATPYVSTPDVPRR HHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCHHHHHHHHCHHHHCCCCCCCCCCCHH MADDDLVPVFDGTVGIRFEPARAFDATAWPSGGAGMVGTAHDCLTLLDTLRTGLDGWLAP HCCCCCEEEECCCEEEEECCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCH RWIDEMARVQPGAHDLPDAPGFGFGLGFSVLHDPVAAQSPESVGTWRWGGAYGHAWFVDR HHHHHHHHCCCCCCCCCCCCCCCHHCCHHHHHCCHHCCCCCCCCCEECCCCCCCHHEEHH AAGLTVVALTNTLYEGMHGRIVTDVRDAVYGIDDRSAA CCCEEEEEEHHHHHHCCCCCCHHHHHHHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 11472796; 11847270 [H]