| Definition | Burkholderia cenocepacia HI2424 chromosome 1, complete sequence. |
|---|---|
| Accession | NC_008542 |
| Length | 3,483,902 |
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The map label for this gene is apbA [H]
Identifier: 116690601
GI number: 116690601
Start: 2856231
End: 2857175
Strand: Reverse
Name: apbA [H]
Synonym: Bcen2424_2581
Alternate gene names: 116690601
Gene position: 2857175-2856231 (Counterclockwise)
Preceding gene: 116690602
Following gene: 116690600
Centisome position: 82.01
GC content: 70.79
Gene sequence:
>945_bases ATGAGAATTGCAATTCTGGGCGCGGGCGCGATGGGCTCGCTGTTTGGCGGGCGGCTCGCCGAAAGCGGCGAAGCCGTCAC GCTGATCGACGTGAACGATGCGCATCTCGATGCGATCGGCCGCGACGGGCTGCGCATCGACGACGACCGCGGCGACCGGC GCGTTCGCACGCTGCAGGCCGTGCGGCCGGAAGCCGCGAATGCGCACGCGGCCGCAGCACTCGACACACCGTTCGACCTG CTGATCGTTTTCACGAAATCGCTGCATACGCGGGCGGCGCTCGACGGCGTGCGGGCGCTGCTGAGCTCGGACACGTTCGT GCTGACGCTGCAGAACGGGCTCGGCAACGTCGAGACGCTGAACGCGTTCGTGCCGCTCGAGCGCATCCTGGTCGGCGTGA CGACGTGGCCGGCCGATGCGGCCGGCCCTGCGCACGTGCGCTCGCACGGCGCCGGCACGATCCGGATGATGACGGCCGAC GGCGCGGTACGTCCCTTTGCGACAGCCGTAGCCGACACGCTGTCGCGCGCGGGGCTCGCGTGCACGCTCGACGCCGACGT ATGGGCCGCGATCTGGGAGAAGGTCGCGTTCAACGCGGCGCTCAACACGCTGTGCGCGACGACGGGCTGCACCGTCGACC AGCTCGGCCATCATCACGACGGGCCGCGGCTCGCGCTCGCGATCGCGGCCGAGACGGCCGCCGTCGCGCGCGCGAAGGGC ATCGCGGTCGACGGCGAGCGCATCGCGCGCAACGTCGAGCATGCGATCCGCGACCATCGCGGCCATCGCCCGTCGATGCT GCAGGACGTGCTCGCGGGCCGTCGCACCGAAATCGATGCGATCAGCGGCAAGGTCGTCGCGGCCGCGCGTGAAGCGGGCG TCGCGGTGCCGCATGCGGAGACGCTGCTCGCGCTGGTCCGCTTGATCGACGCACGGACGAATTGA
Upstream 100 bases:
>100_bases CACTTCGGCGGCAAGGCCGGCATCGCCGCGTTCACCGACCTGCGCTGGATCACCGTGCAGACGGCCCCGCGCCACTATCC GTTCTGACGAGGCGCCGACG
Downstream 100 bases:
>100_bases GCAACAGGCCAGCGGCCGGCTGGCGCCGCATGACGATACGGATGCCGCGCCCGCGGGGCGATGGCGCCGGATCGTGAAGG GTGGGACGAGACACCGGCGC
Product: 2-dehydropantoate 2-reductase
Products: NA
Alternate protein names: Ketopantoate reductase; KPA reductase; KPR [H]
Number of amino acids: Translated: 314; Mature: 314
Protein sequence:
>314_residues MRIAILGAGAMGSLFGGRLAESGEAVTLIDVNDAHLDAIGRDGLRIDDDRGDRRVRTLQAVRPEAANAHAAAALDTPFDL LIVFTKSLHTRAALDGVRALLSSDTFVLTLQNGLGNVETLNAFVPLERILVGVTTWPADAAGPAHVRSHGAGTIRMMTAD GAVRPFATAVADTLSRAGLACTLDADVWAAIWEKVAFNAALNTLCATTGCTVDQLGHHHDGPRLALAIAAETAAVARAKG IAVDGERIARNVEHAIRDHRGHRPSMLQDVLAGRRTEIDAISGKVVAAAREAGVAVPHAETLLALVRLIDARTN
Sequences:
>Translated_314_residues MRIAILGAGAMGSLFGGRLAESGEAVTLIDVNDAHLDAIGRDGLRIDDDRGDRRVRTLQAVRPEAANAHAAAALDTPFDL LIVFTKSLHTRAALDGVRALLSSDTFVLTLQNGLGNVETLNAFVPLERILVGVTTWPADAAGPAHVRSHGAGTIRMMTAD GAVRPFATAVADTLSRAGLACTLDADVWAAIWEKVAFNAALNTLCATTGCTVDQLGHHHDGPRLALAIAAETAAVARAKG IAVDGERIARNVEHAIRDHRGHRPSMLQDVLAGRRTEIDAISGKVVAAAREAGVAVPHAETLLALVRLIDARTN >Mature_314_residues MRIAILGAGAMGSLFGGRLAESGEAVTLIDVNDAHLDAIGRDGLRIDDDRGDRRVRTLQAVRPEAANAHAAAALDTPFDL LIVFTKSLHTRAALDGVRALLSSDTFVLTLQNGLGNVETLNAFVPLERILVGVTTWPADAAGPAHVRSHGAGTIRMMTAD GAVRPFATAVADTLSRAGLACTLDADVWAAIWEKVAFNAALNTLCATTGCTVDQLGHHHDGPRLALAIAAETAAVARAKG IAVDGERIARNVEHAIRDHRGHRPSMLQDVLAGRRTEIDAISGKVVAAAREAGVAVPHAETLLALVRLIDARTN
Specific function: Catalyzes the NADPH-dependent reduction of ketopantoate into pantoic acid [H]
COG id: COG1893
COG function: function code H; Ketopantoate reductase
Gene ontology:
Cell location: Cytoplasm (Potential) [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the ketopantoate reductase family [H]
Homologues:
Organism=Escherichia coli, GI1786627, Length=309, Percent_Identity=29.7734627831715, Blast_Score=92, Evalue=4e-20,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR008927 - InterPro: IPR003710 - InterPro: IPR013752 - InterPro: IPR013332 - InterPro: IPR013328 - InterPro: IPR016040 [H]
Pfam domain/function: PF02558 ApbA; PF08546 ApbA_C [H]
EC number: =1.1.1.169 [H]
Molecular weight: Translated: 32908; Mature: 32908
Theoretical pI: Translated: 6.80; Mature: 6.80
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRIAILGAGAMGSLFGGRLAESGEAVTLIDVNDAHLDAIGRDGLRIDDDRGDRRVRTLQA CEEEEEECCCHHHHHCCHHCCCCCEEEEEECCCHHHHHCCCCCCEECCCCCCHHHHHHHH VRPEAANAHAAAALDTPFDLLIVFTKSLHTRAALDGVRALLSSDTFVLTLQNGLGNVETL HCCCCCCCCHHEECCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCHHHH NAFVPLERILVGVTTWPADAAGPAHVRSHGAGTIRMMTADGAVRPFATAVADTLSRAGLA HHHHHHHHHHEEEECCCCCCCCCHHHHCCCCCEEEEEECCCCCHHHHHHHHHHHHHCCEE CTLDADVWAAIWEKVAFNAALNTLCATTGCTVDQLGHHHDGPRLALAIAAETAAVARAKG EEECHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHCCCCCCCEEEEEEEHHHHHHHHHCC IAVDGERIARNVEHAIRDHRGHRPSMLQDVLAGRRTEIDAISGKVVAAAREAGVAVPHAE CEECHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCCCCHHHHCCCEEEEHHHCCCCCCCHH TLLALVRLIDARTN HHHHHHHHHHCCCC >Mature Secondary Structure MRIAILGAGAMGSLFGGRLAESGEAVTLIDVNDAHLDAIGRDGLRIDDDRGDRRVRTLQA CEEEEEECCCHHHHHCCHHCCCCCEEEEEECCCHHHHHCCCCCCEECCCCCCHHHHHHHH VRPEAANAHAAAALDTPFDLLIVFTKSLHTRAALDGVRALLSSDTFVLTLQNGLGNVETL HCCCCCCCCHHEECCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCHHHH NAFVPLERILVGVTTWPADAAGPAHVRSHGAGTIRMMTADGAVRPFATAVADTLSRAGLA HHHHHHHHHHEEEECCCCCCCCCHHHHCCCCCEEEEEECCCCCHHHHHHHHHHHHHCCEE CTLDADVWAAIWEKVAFNAALNTLCATTGCTVDQLGHHHDGPRLALAIAAETAAVARAKG EEECHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHCCCCCCCEEEEEEEHHHHHHHHHCC IAVDGERIARNVEHAIRDHRGHRPSMLQDVLAGRRTEIDAISGKVVAAAREAGVAVPHAE CEECHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCCCCHHHHCCCEEEEHHHCCCCCCCHH TLLALVRLIDARTN HHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 11296296 [H]