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The map label for this gene is ybbN [H]

Identifier: 116690586

GI number: 116690586

Start: 2841672

End: 2842520

Strand: Direct

Name: ybbN [H]

Synonym: Bcen2424_2566

Alternate gene names: 116690586

Gene position: 2841672-2842520 (Clockwise)

Preceding gene: 116690585

Following gene: 116690588

Centisome position: 81.57

GC content: 68.79

Gene sequence:

>849_bases
ATGGACACCACGCTTGCCACATTCGAGAAAGACGTCATCGAGGCGTCGCTGGATACGCCCGTGCTGGTCGACTTCTGGGC
GCCGTGGTGCGGCCCCTGCAAGACGCTCGGCCCGCTGCTGGAAAAGCTCGAGGCCGATTACGCAGGCCGCTGGAAGCTCG
TGAAGGTCAACGTCGACGAGAACCAGGAACTCGCCGCGCACTTCCAGACGCGCAGCATCCCGCATGTGATCGCGTTCGCC
GACGGGCGCCCGGTCGATCAGTTCGTCGGCGTGCTGCCCGAGGGCCAGTTGCGCGCGTTCCTCGACCGGCTGCTGCCGGC
GGCCGAGGAAGCCGAGCGCCGCGCCGCGCAATATGCGATGGCCGAACAGCGCTTCGACGATGCGCTCGCCCACCTCGAAG
CGGCGCTGGCGCTGAACCCCGGCTACGACGACGCGCGCCTCGACCTGATCGAGCTGCTGCTCGCGCGCAACGAGGTCGAC
GCCGCGCGCGCGGAAACCGAGCGCCTGTCGCCGCAAACCGTGCAGAACGGCGATCCGCGCTACCAGGCGATCAAGACCCG
TTTCGACGCGCTGGACGCCACGGCCGACTTGCCGCCGACCGACGCGCTCGAAGCGCGCATCGCGGCGAATCCCGCCGATC
TCGACGCGCGCTTCGACCTCGCGCAGAGCCTGATCGCGCGGCGCGCGTACGAAGGGGCACTGGAACAGTTGCTGGAAATC
GTGACGCGCGATCGCGCATACGGCGACGATCTCGGCCGCCGCACGATGATCTCGGTGTTCGAACTGGCCGGCGATCGCCC
CGACCTCGTCGCCGCGTGGCGACGCAAGCTGAGCATGGCGCTCAACTGA

Upstream 100 bases:

>100_bases
CCTGGCGAGACGGAATGGATTCCGCTGCCCGAAGCGAAGCCGCGTTGAAAAAGCGGCGCGCCGCCCCCATCCTGACGACA
TTCGAACGGGAGAGAACGAC

Downstream 100 bases:

>100_bases
AGTACGACGAGCCGAGCCACGAAAGGCCGGGCCACGAGAGGCCGGGCCACGATGGCCCGGCTGACCTGCCGTATCGCTCG
ACGCGCGTTACCCGCGCCGC

Product: thioredoxin

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 282; Mature: 282

Protein sequence:

>282_residues
MDTTLATFEKDVIEASLDTPVLVDFWAPWCGPCKTLGPLLEKLEADYAGRWKLVKVNVDENQELAAHFQTRSIPHVIAFA
DGRPVDQFVGVLPEGQLRAFLDRLLPAAEEAERRAAQYAMAEQRFDDALAHLEAALALNPGYDDARLDLIELLLARNEVD
AARAETERLSPQTVQNGDPRYQAIKTRFDALDATADLPPTDALEARIAANPADLDARFDLAQSLIARRAYEGALEQLLEI
VTRDRAYGDDLGRRTMISVFELAGDRPDLVAAWRRKLSMALN

Sequences:

>Translated_282_residues
MDTTLATFEKDVIEASLDTPVLVDFWAPWCGPCKTLGPLLEKLEADYAGRWKLVKVNVDENQELAAHFQTRSIPHVIAFA
DGRPVDQFVGVLPEGQLRAFLDRLLPAAEEAERRAAQYAMAEQRFDDALAHLEAALALNPGYDDARLDLIELLLARNEVD
AARAETERLSPQTVQNGDPRYQAIKTRFDALDATADLPPTDALEARIAANPADLDARFDLAQSLIARRAYEGALEQLLEI
VTRDRAYGDDLGRRTMISVFELAGDRPDLVAAWRRKLSMALN
>Mature_282_residues
MDTTLATFEKDVIEASLDTPVLVDFWAPWCGPCKTLGPLLEKLEADYAGRWKLVKVNVDENQELAAHFQTRSIPHVIAFA
DGRPVDQFVGVLPEGQLRAFLDRLLPAAEEAERRAAQYAMAEQRFDDALAHLEAALALNPGYDDARLDLIELLLARNEVD
AARAETERLSPQTVQNGDPRYQAIKTRFDALDATADLPPTDALEARIAANPADLDARFDLAQSLIARRAYEGALEQLLEI
VTRDRAYGDDLGRRTMISVFELAGDRPDLVAAWRRKLSMALN

Specific function: Unknown

COG id: COG3118

COG function: function code O; Thioredoxin domain-containing protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 thioredoxin domain [H]

Homologues:

Organism=Homo sapiens, GI21361403, Length=98, Percent_Identity=44.8979591836735, Blast_Score=95, Evalue=6e-20,
Organism=Escherichia coli, GI87081747, Length=268, Percent_Identity=35.0746268656716, Blast_Score=142, Evalue=3e-35,
Organism=Escherichia coli, GI87082331, Length=96, Percent_Identity=41.6666666666667, Blast_Score=92, Evalue=4e-20,
Organism=Escherichia coli, GI1788936, Length=107, Percent_Identity=36.4485981308411, Blast_Score=90, Evalue=2e-19,
Organism=Caenorhabditis elegans, GI212646193, Length=100, Percent_Identity=43, Blast_Score=85, Evalue=5e-17,
Organism=Saccharomyces cerevisiae, GI6321648, Length=85, Percent_Identity=38.8235294117647, Blast_Score=67, Evalue=4e-12,
Organism=Drosophila melanogaster, GI28573567, Length=103, Percent_Identity=38.8349514563107, Blast_Score=85, Evalue=7e-17,
Organism=Drosophila melanogaster, GI24664269, Length=85, Percent_Identity=41.1764705882353, Blast_Score=82, Evalue=3e-16,
Organism=Drosophila melanogaster, GI24639826, Length=73, Percent_Identity=39.7260273972603, Blast_Score=74, Evalue=1e-13,
Organism=Drosophila melanogaster, GI21358065, Length=94, Percent_Identity=38.2978723404255, Blast_Score=72, Evalue=5e-13,
Organism=Drosophila melanogaster, GI24639068, Length=96, Percent_Identity=36.4583333333333, Blast_Score=70, Evalue=1e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005746
- InterPro:   IPR017936
- InterPro:   IPR012336
- InterPro:   IPR013766
- InterPro:   IPR012335
- InterPro:   IPR011990 [H]

Pfam domain/function: PF00085 Thioredoxin [H]

EC number: NA

Molecular weight: Translated: 31354; Mature: 31354

Theoretical pI: Translated: 4.39; Mature: 4.39

Prosite motif: PS00194 THIOREDOXIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDTTLATFEKDVIEASLDTPVLVDFWAPWCGPCKTLGPLLEKLEADYAGRWKLVKVNVDE
CCCHHHHHHHHHHHHCCCCCEEEECCCCCCCHHHHHHHHHHHHCCCCCCCEEEEEEECCC
NQELAAHFQTRSIPHVIAFADGRPVDQFVGVLPEGQLRAFLDRLLPAAEEAERRAAQYAM
CHHHHHHHHHCCCCEEEEECCCCCHHHHHCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHH
AEQRFDDALAHLEAALALNPGYDDARLDLIELLLARNEVDAARAETERLSPQTVQNGDPR
HHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCHHHHHHHHHHHCCCCHHCCCCHH
YQAIKTRFDALDATADLPPTDALEARIAANPADLDARFDLAQSLIARRAYEGALEQLLEI
HHHHHHHHHHHCCCCCCCCCHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
VTRDRAYGDDLGRRTMISVFELAGDRPDLVAAWRRKLSMALN
HHHCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCC
>Mature Secondary Structure
MDTTLATFEKDVIEASLDTPVLVDFWAPWCGPCKTLGPLLEKLEADYAGRWKLVKVNVDE
CCCHHHHHHHHHHHHCCCCCEEEECCCCCCCHHHHHHHHHHHHCCCCCCCEEEEEEECCC
NQELAAHFQTRSIPHVIAFADGRPVDQFVGVLPEGQLRAFLDRLLPAAEEAERRAAQYAM
CHHHHHHHHHCCCCEEEEECCCCCHHHHHCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHH
AEQRFDDALAHLEAALALNPGYDDARLDLIELLLARNEVDAARAETERLSPQTVQNGDPR
HHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCHHHHHHHHHHHCCCCHHCCCCHH
YQAIKTRFDALDATADLPPTDALEARIAANPADLDARFDLAQSLIARRAYEGALEQLLEI
HHHHHHHHHHHCCCCCCCCCHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
VTRDRAYGDDLGRRTMISVFELAGDRPDLVAAWRRKLSMALN
HHHCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9278503 [H]