| Definition | Burkholderia cenocepacia HI2424 chromosome 1, complete sequence. |
|---|---|
| Accession | NC_008542 |
| Length | 3,483,902 |
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The map label for this gene is 116690560
Identifier: 116690560
GI number: 116690560
Start: 2816499
End: 2817023
Strand: Reverse
Name: 116690560
Synonym: Bcen2424_2540
Alternate gene names: NA
Gene position: 2817023-2816499 (Counterclockwise)
Preceding gene: 116690563
Following gene: 116690559
Centisome position: 80.86
GC content: 68.76
Gene sequence:
>525_bases ATGAAGACCCTCGAAGATCATCTTTCCCAGTATGCGGCCTACCATCGCGACGCGCGCAACATCGCGACGCATCTGGTCGG CATCCCGATGATCGTGTTCGCGGTCGAGGTGCTGCTGTCGCGGCCGGCGCTCGGGATGCTGGCCGGCATCGCGCTGTCGC CGGCGCTGCTGCTCGCCGTCGTGTCCGCGCTGTTCTACTTGCGTCTCGACCTGCGGTTCGGGATCGTGATGACCGGGCTG CTCGCCCTCGGCCTGTGGGCCGCGCAGTCGCTGGCGCCGCTGCGGACCGCGCAATGGCTTGCAATCGGCATCGGCGCGTT CGTCGTCGGCTGGATCGTGCAGTTCGTCGGGCACTGGTTCGAAGGCCGCAAGCCCGCGTTCGTCGACGATCTGGTCGGCC TGATCGTCGGGCCGCTGTTCGTCGTCGCCGAGGTCGCGTTCTTCGTGGGGCTGCGCGGCGACGTACGCCGCGAAGTCGAG CGGCGCGCGGGCCCGGTGCATGGCGGCGCGCATTCGCATGTCTGA
Upstream 100 bases:
>100_bases GGGCGAGCGAAGAAGGCATGGGCACGCGATGTCGGGTAGCTGACAGAGGTTCTCGGGCGTGACGCGCATCATAGCGCTCA ATAACCGATCAGGAGACGCC
Downstream 100 bases:
>100_bases TGCGTCGGCCGGGCCGGTCTGCGTATTCGGCGCGGGCGCGATCGGGTGCTACCTCGGCGGCCGCCTCGCGGCAGCCGGCG CGCACGTCACGCTCGTCGGC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 174; Mature: 174
Protein sequence:
>174_residues MKTLEDHLSQYAAYHRDARNIATHLVGIPMIVFAVEVLLSRPALGMLAGIALSPALLLAVVSALFYLRLDLRFGIVMTGL LALGLWAAQSLAPLRTAQWLAIGIGAFVVGWIVQFVGHWFEGRKPAFVDDLVGLIVGPLFVVAEVAFFVGLRGDVRREVE RRAGPVHGGAHSHV
Sequences:
>Translated_174_residues MKTLEDHLSQYAAYHRDARNIATHLVGIPMIVFAVEVLLSRPALGMLAGIALSPALLLAVVSALFYLRLDLRFGIVMTGL LALGLWAAQSLAPLRTAQWLAIGIGAFVVGWIVQFVGHWFEGRKPAFVDDLVGLIVGPLFVVAEVAFFVGLRGDVRREVE RRAGPVHGGAHSHV >Mature_174_residues MKTLEDHLSQYAAYHRDARNIATHLVGIPMIVFAVEVLLSRPALGMLAGIALSPALLLAVVSALFYLRLDLRFGIVMTGL LALGLWAAQSLAPLRTAQWLAIGIGAFVVGWIVQFVGHWFEGRKPAFVDDLVGLIVGPLFVVAEVAFFVGLRGDVRREVE RRAGPVHGGAHSHV
Specific function: Unknown
COG id: COG4539
COG function: function code S; Predicted membrane protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Saccharomyces cerevisiae, GI6321428, Length=159, Percent_Identity=30.8176100628931, Blast_Score=67, Evalue=2e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 18842; Mature: 18842
Theoretical pI: Translated: 9.73; Mature: 9.73
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKTLEDHLSQYAAYHRDARNIATHLVGIPMIVFAVEVLLSRPALGMLAGIALSPALLLAV CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHH VSALFYLRLDLRFGIVMTGLLALGLWAAQSLAPLRTAQWLAIGIGAFVVGWIVQFVGHWF HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH EGRKPAFVDDLVGLIVGPLFVVAEVAFFVGLRGDVRREVERRAGPVHGGAHSHV CCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCCCCCCC >Mature Secondary Structure MKTLEDHLSQYAAYHRDARNIATHLVGIPMIVFAVEVLLSRPALGMLAGIALSPALLLAV CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHH VSALFYLRLDLRFGIVMTGLLALGLWAAQSLAPLRTAQWLAIGIGAFVVGWIVQFVGHWF HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH EGRKPAFVDDLVGLIVGPLFVVAEVAFFVGLRGDVRREVERRAGPVHGGAHSHV CCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA