Definition Burkholderia cenocepacia HI2424 chromosome 1, complete sequence.
Accession NC_008542
Length 3,483,902

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The map label for this gene is 116690560

Identifier: 116690560

GI number: 116690560

Start: 2816499

End: 2817023

Strand: Reverse

Name: 116690560

Synonym: Bcen2424_2540

Alternate gene names: NA

Gene position: 2817023-2816499 (Counterclockwise)

Preceding gene: 116690563

Following gene: 116690559

Centisome position: 80.86

GC content: 68.76

Gene sequence:

>525_bases
ATGAAGACCCTCGAAGATCATCTTTCCCAGTATGCGGCCTACCATCGCGACGCGCGCAACATCGCGACGCATCTGGTCGG
CATCCCGATGATCGTGTTCGCGGTCGAGGTGCTGCTGTCGCGGCCGGCGCTCGGGATGCTGGCCGGCATCGCGCTGTCGC
CGGCGCTGCTGCTCGCCGTCGTGTCCGCGCTGTTCTACTTGCGTCTCGACCTGCGGTTCGGGATCGTGATGACCGGGCTG
CTCGCCCTCGGCCTGTGGGCCGCGCAGTCGCTGGCGCCGCTGCGGACCGCGCAATGGCTTGCAATCGGCATCGGCGCGTT
CGTCGTCGGCTGGATCGTGCAGTTCGTCGGGCACTGGTTCGAAGGCCGCAAGCCCGCGTTCGTCGACGATCTGGTCGGCC
TGATCGTCGGGCCGCTGTTCGTCGTCGCCGAGGTCGCGTTCTTCGTGGGGCTGCGCGGCGACGTACGCCGCGAAGTCGAG
CGGCGCGCGGGCCCGGTGCATGGCGGCGCGCATTCGCATGTCTGA

Upstream 100 bases:

>100_bases
GGGCGAGCGAAGAAGGCATGGGCACGCGATGTCGGGTAGCTGACAGAGGTTCTCGGGCGTGACGCGCATCATAGCGCTCA
ATAACCGATCAGGAGACGCC

Downstream 100 bases:

>100_bases
TGCGTCGGCCGGGCCGGTCTGCGTATTCGGCGCGGGCGCGATCGGGTGCTACCTCGGCGGCCGCCTCGCGGCAGCCGGCG
CGCACGTCACGCTCGTCGGC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 174; Mature: 174

Protein sequence:

>174_residues
MKTLEDHLSQYAAYHRDARNIATHLVGIPMIVFAVEVLLSRPALGMLAGIALSPALLLAVVSALFYLRLDLRFGIVMTGL
LALGLWAAQSLAPLRTAQWLAIGIGAFVVGWIVQFVGHWFEGRKPAFVDDLVGLIVGPLFVVAEVAFFVGLRGDVRREVE
RRAGPVHGGAHSHV

Sequences:

>Translated_174_residues
MKTLEDHLSQYAAYHRDARNIATHLVGIPMIVFAVEVLLSRPALGMLAGIALSPALLLAVVSALFYLRLDLRFGIVMTGL
LALGLWAAQSLAPLRTAQWLAIGIGAFVVGWIVQFVGHWFEGRKPAFVDDLVGLIVGPLFVVAEVAFFVGLRGDVRREVE
RRAGPVHGGAHSHV
>Mature_174_residues
MKTLEDHLSQYAAYHRDARNIATHLVGIPMIVFAVEVLLSRPALGMLAGIALSPALLLAVVSALFYLRLDLRFGIVMTGL
LALGLWAAQSLAPLRTAQWLAIGIGAFVVGWIVQFVGHWFEGRKPAFVDDLVGLIVGPLFVVAEVAFFVGLRGDVRREVE
RRAGPVHGGAHSHV

Specific function: Unknown

COG id: COG4539

COG function: function code S; Predicted membrane protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Saccharomyces cerevisiae, GI6321428, Length=159, Percent_Identity=30.8176100628931, Blast_Score=67, Evalue=2e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 18842; Mature: 18842

Theoretical pI: Translated: 9.73; Mature: 9.73

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKTLEDHLSQYAAYHRDARNIATHLVGIPMIVFAVEVLLSRPALGMLAGIALSPALLLAV
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHH
VSALFYLRLDLRFGIVMTGLLALGLWAAQSLAPLRTAQWLAIGIGAFVVGWIVQFVGHWF
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
EGRKPAFVDDLVGLIVGPLFVVAEVAFFVGLRGDVRREVERRAGPVHGGAHSHV
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCCCCCCC
>Mature Secondary Structure
MKTLEDHLSQYAAYHRDARNIATHLVGIPMIVFAVEVLLSRPALGMLAGIALSPALLLAV
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHH
VSALFYLRLDLRFGIVMTGLLALGLWAAQSLAPLRTAQWLAIGIGAFVVGWIVQFVGHWF
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
EGRKPAFVDDLVGLIVGPLFVVAEVAFFVGLRGDVRREVERRAGPVHGGAHSHV
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA