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The map label for this gene is frc [H]

Identifier: 116690553

GI number: 116690553

Start: 2808548

End: 2809939

Strand: Reverse

Name: frc [H]

Synonym: Bcen2424_2533

Alternate gene names: 116690553

Gene position: 2809939-2808548 (Counterclockwise)

Preceding gene: 116690555

Following gene: 116690551

Centisome position: 80.65

GC content: 73.35

Gene sequence:

>1392_bases
ATGACACCCGATTCCGCCTTGGCGCATCTTTGGCAACTCGCACGCGGCGAACGCGACACGCTGGCCCGCACGACCGTGAC
CGGGCAGGACCCGACGCTACCGTCGACGTTTCATGTCGGCACGCTCGCCGCCGCGACGATCGCCGCAGCCGGGCTCGCGG
CAGCCGAATGCCATCGGCTGCGGACGGGCGTGGCGCAATCGGTCGACGTGTCGGTGCGCGACGCGCTCGTGGCGTTCCGC
AGCGAACGCTACCTGCGCGTGGACGACGGCCCACCGCCGGAGTTGCGTCATCCGGTGACCGGCTTCTTCGAGACGGGCGA
CGGACGCTGGATTCAACTGCACGCGAATTTCCCGCATCACCTGCACGGTATTCTCGACGTGCTCGGCTGCGGCCGGCAGC
CCGCCGACGTCGCCGCGGCGATCCGCACCTGGGACGGCGCGGCGCTCGATACCGCGCTGGCCGACGCCGGCCTGTGCGCG
GCATTGATCAGAACCCCTGACGAATGGGCGGCGCACGAGCAGGCGCGCGCGATCGCGTCGCTGCCGCTGTTCGAGATCGA
GCGGATCGGCGACGCGCCGGCCGAGCCGATCGGCCGCGGCGACGCCAGCCAGCCGCTGGCCGGCGTGCGCGTGCTCGATC
TCACGCGCATCATCGCGGGCCCGGTCGCGGGCCGCACGCTGGCCTCGCACGGCGCGCAGACGCTGCTCGTCAACGGTCCG
CACCTGCCGAACATCGCGCCGCTCGTGATCGACAACGGGCGCGGCAAGCGTTCGACGTGGATCGATTTGCGCGACGCGGA
AGGCGTCGATACGCTGCACGCCCTGGCGCGCGAGGCGGACGTGTTTCTGCAGTCGTACCGCCCCGGCGCGCTCGCCGCGC
GCGGTTTCACGCCGCATGCGCTGGCGGCGCGGCGGCCCGGCATCGTCTACGTGTCGGTGTCGGCGTACGGGCATGCAGGG
CCGTGGGCGCAGCGGCGCGGGTTCGACAGCCTCGTGCAGTCGGCGAGCGGCATCGCATGGCACGAGCAGCAGGCCGCGCA
GGCGAGCGGGCCGCGCCATCTGCCGTGCCAGGCGCTCGATCATGCAACGGGGTATCTCGCGGCGTTCGGCGCGATGATCG
CGCTCGCCCGGCGGGCGCGCGAAGGGGGAAGCTGGCACGTGCGGATGTCGCTCGCGCAGACGGGGCGCTGGCTGCAGTCG
TTCGGCGCGGTGCCGGACGGGCTGCAGGCGCCCGATCTCGCGCTGGCCGACGTGCGCGACCGGATCGACCGCATCGCGTC
GCCGTTCGGCGCGCTCGATACCGTGCGGCCGGCCGAGCGGTTGTCGGCGACGCCGCCGTCGTTCGCGCGGCCGCCCGTGC
CGCTCGGCACCGACGACGCGCGCTGGCTGTGA

Upstream 100 bases:

>100_bases
TACAACTATTCGTTATGTATTGATTCGCGCAATCAAGATTGATCGCGCCTGACGCGAATTCTAGACTCGATTCCGTCTCC
TCAACGGCGTCTCCTTCACC

Downstream 100 bases:

>100_bases
GGGGAGGCGGCGCGGCTCGCGTTACTTGCGTAGCTCGACGACGAAATCGTAGTAGTCGTTGCGGCAGTAGGTATCGGTCA
GTTCGATCGCGCGCTGGTCG

Product: L-carnitine dehydratase/bile acid-inducible protein F

Products: NA

Alternate protein names: Formyl-CoA transferase [H]

Number of amino acids: Translated: 463; Mature: 462

Protein sequence:

>463_residues
MTPDSALAHLWQLARGERDTLARTTVTGQDPTLPSTFHVGTLAAATIAAAGLAAAECHRLRTGVAQSVDVSVRDALVAFR
SERYLRVDDGPPPELRHPVTGFFETGDGRWIQLHANFPHHLHGILDVLGCGRQPADVAAAIRTWDGAALDTALADAGLCA
ALIRTPDEWAAHEQARAIASLPLFEIERIGDAPAEPIGRGDASQPLAGVRVLDLTRIIAGPVAGRTLASHGAQTLLVNGP
HLPNIAPLVIDNGRGKRSTWIDLRDAEGVDTLHALAREADVFLQSYRPGALAARGFTPHALAARRPGIVYVSVSAYGHAG
PWAQRRGFDSLVQSASGIAWHEQQAAQASGPRHLPCQALDHATGYLAAFGAMIALARRAREGGSWHVRMSLAQTGRWLQS
FGAVPDGLQAPDLALADVRDRIDRIASPFGALDTVRPAERLSATPPSFARPPVPLGTDDARWL

Sequences:

>Translated_463_residues
MTPDSALAHLWQLARGERDTLARTTVTGQDPTLPSTFHVGTLAAATIAAAGLAAAECHRLRTGVAQSVDVSVRDALVAFR
SERYLRVDDGPPPELRHPVTGFFETGDGRWIQLHANFPHHLHGILDVLGCGRQPADVAAAIRTWDGAALDTALADAGLCA
ALIRTPDEWAAHEQARAIASLPLFEIERIGDAPAEPIGRGDASQPLAGVRVLDLTRIIAGPVAGRTLASHGAQTLLVNGP
HLPNIAPLVIDNGRGKRSTWIDLRDAEGVDTLHALAREADVFLQSYRPGALAARGFTPHALAARRPGIVYVSVSAYGHAG
PWAQRRGFDSLVQSASGIAWHEQQAAQASGPRHLPCQALDHATGYLAAFGAMIALARRAREGGSWHVRMSLAQTGRWLQS
FGAVPDGLQAPDLALADVRDRIDRIASPFGALDTVRPAERLSATPPSFARPPVPLGTDDARWL
>Mature_462_residues
TPDSALAHLWQLARGERDTLARTTVTGQDPTLPSTFHVGTLAAATIAAAGLAAAECHRLRTGVAQSVDVSVRDALVAFRS
ERYLRVDDGPPPELRHPVTGFFETGDGRWIQLHANFPHHLHGILDVLGCGRQPADVAAAIRTWDGAALDTALADAGLCAA
LIRTPDEWAAHEQARAIASLPLFEIERIGDAPAEPIGRGDASQPLAGVRVLDLTRIIAGPVAGRTLASHGAQTLLVNGPH
LPNIAPLVIDNGRGKRSTWIDLRDAEGVDTLHALAREADVFLQSYRPGALAARGFTPHALAARRPGIVYVSVSAYGHAGP
WAQRRGFDSLVQSASGIAWHEQQAAQASGPRHLPCQALDHATGYLAAFGAMIALARRAREGGSWHVRMSLAQTGRWLQSF
GAVPDGLQAPDLALADVRDRIDRIASPFGALDTVRPAERLSATPPSFARPPVPLGTDDARWL

Specific function: Catalyzes the transfer of the CoA moiety from formyl-CoA to oxalate [H]

COG id: COG1804

COG function: function code C; Predicted acyl-CoA transferases/carnitine dehydratase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the CaiB/BaiF CoA-transferase family [H]

Homologues:

Organism=Homo sapiens, GI300863128, Length=206, Percent_Identity=31.5533980582524, Blast_Score=100, Evalue=2e-21,
Organism=Homo sapiens, GI300863124, Length=206, Percent_Identity=31.5533980582524, Blast_Score=100, Evalue=3e-21,
Organism=Homo sapiens, GI300863126, Length=147, Percent_Identity=33.3333333333333, Blast_Score=97, Evalue=4e-20,
Organism=Homo sapiens, GI42794625, Length=199, Percent_Identity=27.6381909547739, Blast_Score=77, Evalue=5e-14,
Organism=Homo sapiens, GI266456254, Length=199, Percent_Identity=27.6381909547739, Blast_Score=76, Evalue=6e-14,
Organism=Homo sapiens, GI266458397, Length=199, Percent_Identity=27.6381909547739, Blast_Score=74, Evalue=2e-13,
Organism=Homo sapiens, GI266458393, Length=199, Percent_Identity=27.6381909547739, Blast_Score=74, Evalue=3e-13,
Organism=Escherichia coli, GI1788717, Length=202, Percent_Identity=28.2178217821782, Blast_Score=81, Evalue=2e-16,
Organism=Escherichia coli, GI87082093, Length=151, Percent_Identity=26.4900662251656, Blast_Score=80, Evalue=2e-16,
Organism=Caenorhabditis elegans, GI115535051, Length=201, Percent_Identity=31.3432835820896, Blast_Score=78, Evalue=1e-14,
Organism=Caenorhabditis elegans, GI32564160, Length=198, Percent_Identity=28.7878787878788, Blast_Score=74, Evalue=2e-13,
Organism=Drosophila melanogaster, GI24648431, Length=194, Percent_Identity=32.9896907216495, Blast_Score=101, Evalue=9e-22,
Organism=Drosophila melanogaster, GI24585488, Length=208, Percent_Identity=27.8846153846154, Blast_Score=79, Evalue=6e-15,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003673
- InterPro:   IPR017659 [H]

Pfam domain/function: PF02515 CoA_transf_3 [H]

EC number: =2.8.3.16 [H]

Molecular weight: Translated: 49243; Mature: 49112

Theoretical pI: Translated: 7.17; Mature: 7.17

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
0.6 %Met     (Translated Protein)
1.5 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
0.4 %Met     (Mature Protein)
1.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTPDSALAHLWQLARGERDTLARTTVTGQDPTLPSTFHVGTLAAATIAAAGLAAAECHRL
CCCHHHHHHHHHHHCCCHHHHHEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH
RTGVAQSVDVSVRDALVAFRSERYLRVDDGPPPELRHPVTGFFETGDGRWIQLHANFPHH
HHCCHHHCCHHHHHHHHHHHCCCEEECCCCCCCCCCCCCCCEEECCCCCEEEEECCCCHH
LHGILDVLGCGRQPADVAAAIRTWDGAALDTALADAGLCAALIRTPDEWAAHEQARAIAS
HHHHHHHHHCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHH
LPLFEIERIGDAPAEPIGRGDASQPLAGVRVLDLTRIIAGPVAGRTLASHGAQTLLVNGP
CCHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCHHHHHCCCCEEEECCC
HLPNIAPLVIDNGRGKRSTWIDLRDAEGVDTLHALAREADVFLQSYRPGALAARGFTPHA
CCCCCCEEEEECCCCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHCCCCCEEECCCCCHH
LAARRPGIVYVSVSAYGHAGPWAQRRGFDSLVQSASGIAWHEQQAAQASGPRHLPCQALD
HHHCCCCEEEEEEECCCCCCCCHHHCCHHHHHHHHCCCCHHHHHHHHCCCCCCCCHHHHH
HATGYLAAFGAMIALARRAREGGSWHVRMSLAQTGRWLQSFGAVPDGLQAPDLALADVRD
HHHHHHHHHHHHHHHHHHHCCCCCEEEEEEHHHHHHHHHHHCCCCCCCCCCCHHHHHHHH
RIDRIASPFGALDTVRPAERLSATPPSFARPPVPLGTDDARWL
HHHHHHCCCCCHHCCCHHHHHCCCCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure 
TPDSALAHLWQLARGERDTLARTTVTGQDPTLPSTFHVGTLAAATIAAAGLAAAECHRL
CCHHHHHHHHHHHCCCHHHHHEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH
RTGVAQSVDVSVRDALVAFRSERYLRVDDGPPPELRHPVTGFFETGDGRWIQLHANFPHH
HHCCHHHCCHHHHHHHHHHHCCCEEECCCCCCCCCCCCCCCEEECCCCCEEEEECCCCHH
LHGILDVLGCGRQPADVAAAIRTWDGAALDTALADAGLCAALIRTPDEWAAHEQARAIAS
HHHHHHHHHCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHH
LPLFEIERIGDAPAEPIGRGDASQPLAGVRVLDLTRIIAGPVAGRTLASHGAQTLLVNGP
CCHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCHHHHHCCCCEEEECCC
HLPNIAPLVIDNGRGKRSTWIDLRDAEGVDTLHALAREADVFLQSYRPGALAARGFTPHA
CCCCCCEEEEECCCCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHCCCCCEEECCCCCHH
LAARRPGIVYVSVSAYGHAGPWAQRRGFDSLVQSASGIAWHEQQAAQASGPRHLPCQALD
HHHCCCCEEEEEEECCCCCCCCHHHCCHHHHHHHHCCCCHHHHHHHHCCCCCCCCHHHHH
HATGYLAAFGAMIALARRAREGGSWHVRMSLAQTGRWLQSFGAVPDGLQAPDLALADVRD
HHHHHHHHHHHHHHHHHHHCCCCCEEEEEEHHHHHHHHHHHCCCCCCCCCCCHHHHHHHH
RIDRIASPFGALDTVRPAERLSATPPSFARPPVPLGTDDARWL
HHHHHHCCCCCHHCCCHHHHHCCCCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA