| Definition | Burkholderia cenocepacia HI2424 chromosome 1, complete sequence. |
|---|---|
| Accession | NC_008542 |
| Length | 3,483,902 |
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The map label for this gene is yeaE [H]
Identifier: 116690551
GI number: 116690551
Start: 2806767
End: 2807612
Strand: Reverse
Name: yeaE [H]
Synonym: Bcen2424_2531
Alternate gene names: 116690551
Gene position: 2807612-2806767 (Counterclockwise)
Preceding gene: 116690553
Following gene: 116690544
Centisome position: 80.59
GC content: 68.44
Gene sequence:
>846_bases ATGACAGACACGATCGCCACGGTCGTCTTGCCGAACGGCGAGACGATTCCGAAGCTGGGCCTGGGCACCTGGGAAATGGG CGAGCGGCCGGCGCGGCGCGCGGACGAGATCGCCGCGCTGCGCGAAGGCATCGAACTCGGGATGACGCTGGTCGATACAG CCGAGATGTACGGCGACGGTGCGACCGAGGAACTCGTCGGCGACGCGCTCGCCGGCTTGCGCGACGACGTGTTCCTCGTC AGCAAGGTCTACCCGCACCATGCGAGCCGGCGTGGCGTCGTCGCCGCGTGCGACGCGAGCCTCAAGCGCCTGCGTACCGA TCGCCTCGATCTATACCTGCTGCACTGGCGCGGTTCGGTGCCGCTCGCGGAAACGGTCGAGGGCTTCGACGCGTTGCAGC GCGCGGGCAAGATCCGCCACTGGGGCGTGAGCAACTTCGATACGGCCGACATGGCCGAACTCGTCGACGAGGCGGGCGGC GGTGCGTGCGCAACCAACCAGATTCTCTACAACATCGCGCGACGCGGCCCGGAATTCGACCTGCTGCCGTGGCTGGCCGA CCATCGTATTCCGGCGATGGCGTACAGCCCGGTCGATCACGGGCGGCTGCCGAAACGCTCGCCGCTCGACGAGATCGCGC GGCTGCGCGGCGTGTCGGTGATGCGCGTCGCGCTGGCGTGGGTGCTCGCGCAGCCGGGCGTATTCGCGATTCCGAAGGCG TCGCGGATCGAACACGTGCGCGACAACCGCGCCGCGCTCGATGTCGTGTTCAGCGATGACGAGCGCGCGCAGCTTGACGC ATATTTCCGTCCGCCGCGCAGCAAGCGCGCGCTCGAGATGCTCTGA
Upstream 100 bases:
>100_bases CCGCGTAATAGGCCGGGGGCGCACCGATTGACTACACTGATGCGTCGTATCCGATGCTTCGGCCGCGATGGGCGGCCACG AATCCGCGACGAGGACACGC
Downstream 100 bases:
>100_bases CCGACTTCGGCCGGGCAACGCGTCGGGTCAGTGGTTGCCGCCGGACGATCCGCCGTTGCCGTGACCGCCGCCATTGCCGT TGCCGGTGCCATGGCCGTTG
Product: aldo/keto reductase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 281; Mature: 280
Protein sequence:
>281_residues MTDTIATVVLPNGETIPKLGLGTWEMGERPARRADEIAALREGIELGMTLVDTAEMYGDGATEELVGDALAGLRDDVFLV SKVYPHHASRRGVVAACDASLKRLRTDRLDLYLLHWRGSVPLAETVEGFDALQRAGKIRHWGVSNFDTADMAELVDEAGG GACATNQILYNIARRGPEFDLLPWLADHRIPAMAYSPVDHGRLPKRSPLDEIARLRGVSVMRVALAWVLAQPGVFAIPKA SRIEHVRDNRAALDVVFSDDERAQLDAYFRPPRSKRALEML
Sequences:
>Translated_281_residues MTDTIATVVLPNGETIPKLGLGTWEMGERPARRADEIAALREGIELGMTLVDTAEMYGDGATEELVGDALAGLRDDVFLV SKVYPHHASRRGVVAACDASLKRLRTDRLDLYLLHWRGSVPLAETVEGFDALQRAGKIRHWGVSNFDTADMAELVDEAGG GACATNQILYNIARRGPEFDLLPWLADHRIPAMAYSPVDHGRLPKRSPLDEIARLRGVSVMRVALAWVLAQPGVFAIPKA SRIEHVRDNRAALDVVFSDDERAQLDAYFRPPRSKRALEML >Mature_280_residues TDTIATVVLPNGETIPKLGLGTWEMGERPARRADEIAALREGIELGMTLVDTAEMYGDGATEELVGDALAGLRDDVFLVS KVYPHHASRRGVVAACDASLKRLRTDRLDLYLLHWRGSVPLAETVEGFDALQRAGKIRHWGVSNFDTADMAELVDEAGGG ACATNQILYNIARRGPEFDLLPWLADHRIPAMAYSPVDHGRLPKRSPLDEIARLRGVSVMRVALAWVLAQPGVFAIPKAS RIEHVRDNRAALDVVFSDDERAQLDAYFRPPRSKRALEML
Specific function: Unknown
COG id: COG0656
COG function: function code R; Aldo/keto reductases, related to diketogulonate reductase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Homo sapiens, GI24497577, Length=307, Percent_Identity=26.0586319218241, Blast_Score=81, Evalue=1e-15, Organism=Homo sapiens, GI5174391, Length=307, Percent_Identity=26.0586319218241, Blast_Score=81, Evalue=1e-15, Organism=Homo sapiens, GI223468663, Length=314, Percent_Identity=26.4331210191083, Blast_Score=79, Evalue=4e-15, Organism=Homo sapiens, GI310109922, Length=294, Percent_Identity=26.8707482993197, Blast_Score=77, Evalue=2e-14, Organism=Homo sapiens, GI5453543, Length=314, Percent_Identity=26.1146496815287, Blast_Score=75, Evalue=8e-14, Organism=Homo sapiens, GI310109920, Length=314, Percent_Identity=26.1146496815287, Blast_Score=74, Evalue=1e-13, Organism=Homo sapiens, GI45446745, Length=314, Percent_Identity=26.1146496815287, Blast_Score=74, Evalue=2e-13, Organism=Homo sapiens, GI4503285, Length=314, Percent_Identity=26.1146496815287, Blast_Score=74, Evalue=2e-13, Organism=Homo sapiens, GI24497585, Length=179, Percent_Identity=31.8435754189944, Blast_Score=73, Evalue=3e-13, Organism=Homo sapiens, GI223718702, Length=210, Percent_Identity=30, Blast_Score=66, Evalue=3e-11, Organism=Escherichia coli, GI1788081, Length=272, Percent_Identity=53.3088235294118, Blast_Score=293, Evalue=1e-80, Organism=Escherichia coli, GI87081735, Length=297, Percent_Identity=29.6296296296296, Blast_Score=113, Evalue=2e-26, Organism=Escherichia coli, GI1788070, Length=303, Percent_Identity=30.03300330033, Blast_Score=101, Evalue=5e-23, Organism=Escherichia coli, GI87082198, Length=269, Percent_Identity=28.6245353159851, Blast_Score=97, Evalue=1e-21, Organism=Escherichia coli, GI1786400, Length=255, Percent_Identity=26.6666666666667, Blast_Score=96, Evalue=4e-21, Organism=Escherichia coli, GI1787674, Length=283, Percent_Identity=27.5618374558304, Blast_Score=91, Evalue=9e-20, Organism=Escherichia coli, GI48994888, Length=266, Percent_Identity=30.8270676691729, Blast_Score=88, Evalue=7e-19, Organism=Escherichia coli, GI1789199, Length=325, Percent_Identity=29.2307692307692, Blast_Score=87, Evalue=1e-18, Organism=Escherichia coli, GI1789375, Length=313, Percent_Identity=26.8370607028754, Blast_Score=80, Evalue=1e-16, Organism=Caenorhabditis elegans, GI17552492, Length=271, Percent_Identity=26.1992619926199, Blast_Score=92, Evalue=3e-19, Organism=Caenorhabditis elegans, GI17561298, Length=297, Percent_Identity=28.956228956229, Blast_Score=88, Evalue=6e-18, Organism=Caenorhabditis elegans, GI17566692, Length=312, Percent_Identity=24.6794871794872, Blast_Score=86, Evalue=2e-17, Organism=Caenorhabditis elegans, GI17538386, Length=283, Percent_Identity=29.3286219081272, Blast_Score=83, Evalue=1e-16, Organism=Caenorhabditis elegans, GI71998625, Length=286, Percent_Identity=27.6223776223776, Blast_Score=83, Evalue=2e-16, Organism=Caenorhabditis elegans, GI17564128, Length=306, Percent_Identity=27.1241830065359, Blast_Score=80, Evalue=8e-16, Organism=Caenorhabditis elegans, GI17550248, Length=302, Percent_Identity=23.5099337748344, Blast_Score=80, Evalue=2e-15, Organism=Caenorhabditis elegans, GI17561300, Length=282, Percent_Identity=26.9503546099291, Blast_Score=76, Evalue=2e-14, Organism=Caenorhabditis elegans, GI17537077, Length=302, Percent_Identity=24.5033112582781, Blast_Score=71, Evalue=6e-13, Organism=Caenorhabditis elegans, GI17537075, Length=305, Percent_Identity=24.5901639344262, Blast_Score=69, Evalue=3e-12, Organism=Saccharomyces cerevisiae, GI6324694, Length=297, Percent_Identity=28.956228956229, Blast_Score=94, Evalue=3e-20, Organism=Saccharomyces cerevisiae, GI6320576, Length=316, Percent_Identity=27.2151898734177, Blast_Score=86, Evalue=7e-18, Organism=Drosophila melanogaster, GI45553081, Length=302, Percent_Identity=27.4834437086093, Blast_Score=88, Evalue=8e-18, Organism=Drosophila melanogaster, GI24644950, Length=305, Percent_Identity=25.9016393442623, Blast_Score=81, Evalue=9e-16, Organism=Drosophila melanogaster, GI24662789, Length=284, Percent_Identity=26.7605633802817, Blast_Score=79, Evalue=4e-15, Organism=Drosophila melanogaster, GI24663317, Length=302, Percent_Identity=25.1655629139073, Blast_Score=78, Evalue=5e-15, Organism=Drosophila melanogaster, GI20129731, Length=308, Percent_Identity=26.2987012987013, Blast_Score=75, Evalue=4e-14, Organism=Drosophila melanogaster, GI24657054, Length=307, Percent_Identity=24.1042345276873, Blast_Score=75, Evalue=7e-14, Organism=Drosophila melanogaster, GI281366140, Length=263, Percent_Identity=26.2357414448669, Blast_Score=68, Evalue=8e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001395 - InterPro: IPR020471 - InterPro: IPR023210 [H]
Pfam domain/function: PF00248 Aldo_ket_red [H]
EC number: NA
Molecular weight: Translated: 30988; Mature: 30857
Theoretical pI: Translated: 5.93; Mature: 5.93
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTDTIATVVLPNGETIPKLGLGTWEMGERPARRADEIAALREGIELGMTLVDTAEMYGDG CCCCEEEEEECCCCCCCCCCCCCHHCCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHCCC ATEELVGDALAGLRDDVFLVSKVYPHHASRRGVVAACDASLKRLRTDRLDLYLLHWRGSV CHHHHHHHHHHCCCCCHHHHHHHCCCCCCCCCEEEEHHHHHHHHHHCCCEEEEEEECCCC PLAETVEGFDALQRAGKIRHWGVSNFDTADMAELVDEAGGGACATNQILYNIARRGPEFD CHHHHHHHHHHHHHCCCCEECCCCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCC LLPWLADHRIPAMAYSPVDHGRLPKRSPLDEIARLRGVSVMRVALAWVLAQPGVFAIPKA CCCHHHCCCCCCEEECCCCCCCCCCCCCHHHHHHHHCHHHHHHHHHHHHHCCCEEECCCH SRIEHVRDNRAALDVVFSDDERAQLDAYFRPPRSKRALEML HHHHHHHCCCEEEEEEECCCCCHHHHHHCCCCCCCHHHHCC >Mature Secondary Structure TDTIATVVLPNGETIPKLGLGTWEMGERPARRADEIAALREGIELGMTLVDTAEMYGDG CCCEEEEEECCCCCCCCCCCCCHHCCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHCCC ATEELVGDALAGLRDDVFLVSKVYPHHASRRGVVAACDASLKRLRTDRLDLYLLHWRGSV CHHHHHHHHHHCCCCCHHHHHHHCCCCCCCCCEEEEHHHHHHHHHHCCCEEEEEEECCCC PLAETVEGFDALQRAGKIRHWGVSNFDTADMAELVDEAGGGACATNQILYNIARRGPEFD CHHHHHHHHHHHHHCCCCEECCCCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCC LLPWLADHRIPAMAYSPVDHGRLPKRSPLDEIARLRGVSVMRVALAWVLAQPGVFAIPKA CCCHHHCCCCCCEEECCCCCCCCCCCCCHHHHHHHHCHHHHHHHHHHHHHCCCEEECCCH SRIEHVRDNRAALDVVFSDDERAQLDAYFRPPRSKRALEML HHHHHHHCCCEEEEEEECCCCCHHHHHHCCCCCCCHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9097040; 9278503 [H]