| Definition | Burkholderia cenocepacia HI2424 chromosome 1, complete sequence. |
|---|---|
| Accession | NC_008542 |
| Length | 3,483,902 |
Click here to switch to the map view.
The map label for this gene is 116690465
Identifier: 116690465
GI number: 116690465
Start: 2717902
End: 2718315
Strand: Reverse
Name: 116690465
Synonym: Bcen2424_2445
Alternate gene names: NA
Gene position: 2718315-2717902 (Counterclockwise)
Preceding gene: 116690466
Following gene: 116690464
Centisome position: 78.03
GC content: 71.74
Gene sequence:
>414_bases ATGAACGCCAACCGCCTGAACGATTTCGCCGCGACGCTGCTGCGCGTCGCCCTCGGCGTGCTGTACCTCGCACACGTCGC ACAGAAGGTCTTTGTTTTCACGCTGCCCGGCACCGCGCAGTTCTTCGCGTCGATCGGCCTGCCGGGCTGGCTCGCCTACC TGACCACGTTCGTCGAACTGGCGGGCGGCCTGGCGCTGCTCGCGGGGTTCCGCGTGCGCATCGCCGCGCTGGTGCTGCTG CCGTTCATGCTCGGCGCGGTCGCCGCGCATCTGCCGAACGGCTGGAGCTTCGCGTCGCCGCACGGCGGCTGGGAATATCC GGCGTTCTGGGCCGTCACGCTGGCCGTGCAGGCCCTGCTGGGCGGCGGCGCGTTCGCGCTCGGCGCGCGGGAGGCCGCGG TCCAGCGCGCATGA
Upstream 100 bases:
>100_bases TTCCTTGATGGAATCAATTTAAGCGGTATGGCGTGTTTATCGGCCGAATCGATTCGAATAGAGTGCGATCCACTCCCATC CACTCACGAAGGACTCCGTC
Downstream 100 bases:
>100_bases CGTGAAGGAAAGCAGACGAAAGCGGCACGCGGTTCGGCGTGACCGGTTCCGGTGACACCCCGTTTGCCGATATCATCGCT CCCTGTATCCGCAATCGAGC
Product: DoxX family protein
Products: NA
Alternate protein names: DoxD-Like Family Protein; DoxX Family; Transmembrane Protein; Oxidoreductase CatD; DoxD-Like Protein; Surfeit Locus 4-Related
Number of amino acids: Translated: 137; Mature: 137
Protein sequence:
>137_residues MNANRLNDFAATLLRVALGVLYLAHVAQKVFVFTLPGTAQFFASIGLPGWLAYLTTFVELAGGLALLAGFRVRIAALVLL PFMLGAVAAHLPNGWSFASPHGGWEYPAFWAVTLAVQALLGGGAFALGAREAAVQRA
Sequences:
>Translated_137_residues MNANRLNDFAATLLRVALGVLYLAHVAQKVFVFTLPGTAQFFASIGLPGWLAYLTTFVELAGGLALLAGFRVRIAALVLL PFMLGAVAAHLPNGWSFASPHGGWEYPAFWAVTLAVQALLGGGAFALGAREAAVQRA >Mature_137_residues MNANRLNDFAATLLRVALGVLYLAHVAQKVFVFTLPGTAQFFASIGLPGWLAYLTTFVELAGGLALLAGFRVRIAALVLL PFMLGAVAAHLPNGWSFASPHGGWEYPAFWAVTLAVQALLGGGAFALGAREAAVQRA
Specific function: Unknown
COG id: COG2259
COG function: function code S; Predicted membrane protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 14397; Mature: 14397
Theoretical pI: Translated: 10.26; Mature: 10.26
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 1.5 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 1.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNANRLNDFAATLLRVALGVLYLAHVAQKVFVFTLPGTAQFFASIGLPGWLAYLTTFVEL CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCHHHHHHHHCCHHHHHHHHHHHHH AGGLALLAGFRVRIAALVLLPFMLGAVAAHLPNGWSFASPHGGWEYPAFWAVTLAVQALL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHH GGGAFALGAREAAVQRA CCCHHHHHHHHHHHCCC >Mature Secondary Structure MNANRLNDFAATLLRVALGVLYLAHVAQKVFVFTLPGTAQFFASIGLPGWLAYLTTFVEL CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCHHHHHHHHCCHHHHHHHHHHHHH AGGLALLAGFRVRIAALVLLPFMLGAVAAHLPNGWSFASPHGGWEYPAFWAVTLAVQALL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHH GGGAFALGAREAAVQRA CCCHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA