| Definition | Burkholderia cenocepacia HI2424 chromosome 1, complete sequence. |
|---|---|
| Accession | NC_008542 |
| Length | 3,483,902 |
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The map label for this gene is panC [H]
Identifier: 116690462
GI number: 116690462
Start: 2715683
End: 2716522
Strand: Direct
Name: panC [H]
Synonym: Bcen2424_2442
Alternate gene names: 116690462
Gene position: 2715683-2716522 (Clockwise)
Preceding gene: 116690461
Following gene: 116690463
Centisome position: 77.95
GC content: 67.38
Gene sequence:
>840_bases ATGAAAGTCATCAGCTCGATCCAGGAACTGCGCGACCAGCTGCGCGGACAGAACCGCACGGCGTTCGTGCCGACGATGGG CAACCTGCACGAAGGGCACCTGTCGCTGATGCGCCTCGCGCGCCAGCACGGCGACCCGGTCGTGGCGAGCATCTTCGTCA ACCGGCTGCAATTCGGCCCGAACGAGGATTTCGACAAGTACCCGCGCACGCTCCAGGACGATATCGAGAAGCTGCAGCAG AACAACGTATACGTGCTGTTCGCGCCGACCGAGCGCGACATGTACCCTGAGCCGCAGGAGTATCGCGTGCTGCCGCCGGA CGATCTCGGCGGGATTCTCGAAGGCGAGTTCCGGCCCGGCTTCTTCGCCGGCGTGTGCACGGTCGTCACGAAGCTGATGT CCTGCGTGCAGCCGCGCGTCGCCGTGTTCGGCAAGAAGGATTACCAGCAGCTGATGATCGTGCGCCGGATGTGCCAGCAG CTCGCGCTGCCGGTCGAGATCATCGCGGCCGAGACCGTGCGCGACGAGGACGGCCTCGCGCTGTCGTCGCGCAACCGCTA CCTGACGACCGACGAGCGCAAGGAAGCGCCGGAACTGGCGAAAACGCTGCAGCGCGTGCGCGACAGCGTGCTCGGCGGCG AACGCGACCTCGGCAAGCTCGAGCAGCACGCGCACACGCACCTGGCCGAACGCGGCTGGGTGCCCGACTACATCGCGATC CGCCGCCGCGCGAACCTGATCGCGCCGAGCGCCGCCGAACTCGAGGCCGGCGAGCCGCTCGTCGTGCTCGCGGCCGCGAA GCTCGGCGCGACGCGCCTCATCGACAACCTGGAAATCTGA
Upstream 100 bases:
>100_bases CGTCCGATGCGCCGCCCGCGCGCCGGCGTTCTCCGCTTCGACCCCGACGCCGCTGCCGCGGCGTCAACGCGCGCCTGCGC GAGGAACCCGCTACCCGATC
Downstream 100 bases:
>100_bases CGGCCGGCCCGCCCGCGCCCCTCACGACGCATCACGGAGACACCATGCAGCGCCACATGCTCAAATCGAAGATCCATCGT GCGGCGGTCACGCACTGCGA
Product: pantoate--beta-alanine ligase
Products: NA
Alternate protein names: PS; Pantoate--beta-alanine ligase; Pantoate-activating enzyme [H]
Number of amino acids: Translated: 279; Mature: 279
Protein sequence:
>279_residues MKVISSIQELRDQLRGQNRTAFVPTMGNLHEGHLSLMRLARQHGDPVVASIFVNRLQFGPNEDFDKYPRTLQDDIEKLQQ NNVYVLFAPTERDMYPEPQEYRVLPPDDLGGILEGEFRPGFFAGVCTVVTKLMSCVQPRVAVFGKKDYQQLMIVRRMCQQ LALPVEIIAAETVRDEDGLALSSRNRYLTTDERKEAPELAKTLQRVRDSVLGGERDLGKLEQHAHTHLAERGWVPDYIAI RRRANLIAPSAAELEAGEPLVVLAAAKLGATRLIDNLEI
Sequences:
>Translated_279_residues MKVISSIQELRDQLRGQNRTAFVPTMGNLHEGHLSLMRLARQHGDPVVASIFVNRLQFGPNEDFDKYPRTLQDDIEKLQQ NNVYVLFAPTERDMYPEPQEYRVLPPDDLGGILEGEFRPGFFAGVCTVVTKLMSCVQPRVAVFGKKDYQQLMIVRRMCQQ LALPVEIIAAETVRDEDGLALSSRNRYLTTDERKEAPELAKTLQRVRDSVLGGERDLGKLEQHAHTHLAERGWVPDYIAI RRRANLIAPSAAELEAGEPLVVLAAAKLGATRLIDNLEI >Mature_279_residues MKVISSIQELRDQLRGQNRTAFVPTMGNLHEGHLSLMRLARQHGDPVVASIFVNRLQFGPNEDFDKYPRTLQDDIEKLQQ NNVYVLFAPTERDMYPEPQEYRVLPPDDLGGILEGEFRPGFFAGVCTVVTKLMSCVQPRVAVFGKKDYQQLMIVRRMCQQ LALPVEIIAAETVRDEDGLALSSRNRYLTTDERKEAPELAKTLQRVRDSVLGGERDLGKLEQHAHTHLAERGWVPDYIAI RRRANLIAPSAAELEAGEPLVVLAAAKLGATRLIDNLEI
Specific function: Catalyzes the condensation of pantoate with beta-alanine in an ATP-dependent reaction via a pantoyl-adenylate intermediate [H]
COG id: COG0414
COG function: function code H; Panthothenate synthetase
Gene ontology:
Cell location: Cytoplasm (Potential) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the pantothenate synthetase family [H]
Homologues:
Organism=Escherichia coli, GI1786325, Length=283, Percent_Identity=45.2296819787986, Blast_Score=227, Evalue=7e-61, Organism=Saccharomyces cerevisiae, GI6322046, Length=299, Percent_Identity=37.123745819398, Blast_Score=160, Evalue=2e-40,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004821 - InterPro: IPR003721 - InterPro: IPR014729 [H]
Pfam domain/function: PF02569 Pantoate_ligase [H]
EC number: =6.3.2.1 [H]
Molecular weight: Translated: 31453; Mature: 31453
Theoretical pI: Translated: 6.26; Mature: 6.26
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKVISSIQELRDQLRGQNRTAFVPTMGNLHEGHLSLMRLARQHGDPVVASIFVNRLQFGP CHHHHHHHHHHHHHCCCCCEEECCCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHCCC NEDFDKYPRTLQDDIEKLQQNNVYVLFAPTERDMYPEPQEYRVLPPDDLGGILEGEFRPG CCCHHHCCHHHHHHHHHHHHCCEEEEEECCCCCCCCCCCCCEECCCCCCCCCCCCCCCCC FFAGVCTVVTKLMSCVQPRVAVFGKKDYQQLMIVRRMCQQLALPVEIIAAETVRDEDGLA HHHHHHHHHHHHHHHHCHHHHHHCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCCE LSSRNRYLTTDERKEAPELAKTLQRVRDSVLGGERDLGKLEQHAHTHLAERGWVPDYIAI ECCCCCCCCCCHHHCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCCHHHHH RRRANLIAPSAAELEAGEPLVVLAAAKLGATRLIDNLEI HHHHCCCCCCHHHCCCCCCEEEEEHHHHHHHHHHHCCCC >Mature Secondary Structure MKVISSIQELRDQLRGQNRTAFVPTMGNLHEGHLSLMRLARQHGDPVVASIFVNRLQFGP CHHHHHHHHHHHHHCCCCCEEECCCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHCCC NEDFDKYPRTLQDDIEKLQQNNVYVLFAPTERDMYPEPQEYRVLPPDDLGGILEGEFRPG CCCHHHCCHHHHHHHHHHHHCCEEEEEECCCCCCCCCCCCCEECCCCCCCCCCCCCCCCC FFAGVCTVVTKLMSCVQPRVAVFGKKDYQQLMIVRRMCQQLALPVEIIAAETVRDEDGLA HHHHHHHHHHHHHHHHCHHHHHHCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCCE LSSRNRYLTTDERKEAPELAKTLQRVRDSVLGGERDLGKLEQHAHTHLAERGWVPDYIAI ECCCCCCCCCCHHHCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCCHHHHH RRRANLIAPSAAELEAGEPLVVLAAAKLGATRLIDNLEI HHHHCCCCCCHHHCCCCCCEEEEEHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA