Click here to switch to the map view.

The map label for this gene is ytfM [C]

Identifier: 116690459

GI number: 116690459

Start: 2712291

End: 2714105

Strand: Reverse

Name: ytfM [C]

Synonym: Bcen2424_2439

Alternate gene names: 116690459

Gene position: 2714105-2712291 (Counterclockwise)

Preceding gene: 116690464

Following gene: 116690458

Centisome position: 77.9

GC content: 67.82

Gene sequence:

>1815_bases
TTGGCGGGGCAGTCGAACCAGCAAGCACACACGGCGCATCACGCGGGCCCGCGCGCGGCCCGCGATCGCGCCGGCGCCGC
GGCCCGCGTCGCGCGGGCGGCCCTCGCGGGTTGCCTGGCCGCGTGTTTCGCGCTGCCGGCCCATGCGAAATACGACGTCG
ACATCGACGCGCCGCGCTCGATCCGCAAGCTCCTGAAGACCCATCTCGATATTGCCCGCTTCGCGAAGCGTGACGACATC
AGCGACGACCAGTTCGACTTCCTCGTGACCGCCACGCCGCAGCAGGTGCGCGATTTGACCGCGACGGCCGGCTATTTCTC
GCCGGTCGTGCGTACCGACGTGCGCACCCGCGACGGCAAGCGCGACGTGCACATCGCGGTCGATCCGGGCAAGCAGACCG
TCGTGTCGACGGTCGACCTGACGTTCAAGGGGCCGGTCGAGACCGAGGACCCGAAGCAGGAAACCGCGACCCGTTTCGCG
TTCTCGATGAAGCCGGGCGATCCGTTCACGCAATCCGACTGGGACGACGCGAAGGGCGCGGCGCTCCGGCAACTGCAGTC
GCGCCGCTATCTCGGCGCGAAGATCGTGTCGTCCGAGGCGCGCATCGATCCGCGCACGCAGCGTGCGACGCTCGCGGTCG
CGTTCGACAGCGGCCCGACGTTCACGATCGGCAAGGTTGATGTCGACGGCGTGCGCCGTTATCCGGAAAAGATCGTCACG
AACGTCAATCCGCTGTCGGAAGGCGAGATCTACGACGTGCAGCGGATCGCCGAATTGCAGCGCCAGTTGCAGAACACGCC
GTACTACGCGAGCGTCGCGATCGACGTCGGCGACGATACGTCGAAGCCCGAGCGCACGCCCGTGCACGTGAAGGTCAGCG
AGTTTCCGTACAACAACATCCGCGGCGGCGTCGGCTTCGCCACCGATACCGGGCCGCACGTGCAGGGTTCCTATACGTAT
CTCGACACGTTCGGCGCCGCGTGGCCGCTGACCGTGTCGGGCCGGCTCGACCAGATCCAGCAGTACGGGCAGGTCCAGCT
GTCGATGCCGCCGGGCGAGAAGGGCTGGACCAACAGCGTGCTCGCGTCGTACACGAACACCAACGTGTCGGACACGCGCA
TCTACAGCGCGCGGGTCGGCGTGCAGCGCACGCGCACCGGCCAGTTCATCGACTATGCGTATTCGCTGATGTACTACCAG
GATCGGCTCGACCAGAACGGCGCGGGGCCGACCACGAGCCGCGCGCTGGTGCCGCAGTGGGCGTGGACCCGCCGCAACGT
CGACGATCCGCTGTTCCCGCGCTCGGGCAACCTGATTCATGCGGAGGCCGGCTTCGCGGTCAAGGGCGTGCTGGCCGACG
AGAGCTTCATTCGCGGCTACGCGCGCGGCCAGCAGTATTTGCCGATCGGCAAGCGCGACCTGTTCGTGTTCCGCGCGGAA
CTCGGCGGCGTGTTTACGAGCGGCAGCTCGACCGGCGTGCCGGCGTCGCTGCTGTTCCGCGCCGGCGGCTCGAACTCGGT
GCGCGGCTACGGTTACCAGAGCATCGGCAACAGCGTCGACGGCTCCGTTTTGCCGACCAAGTACCTGATGACGGGGACGG
CCGAATACCAGCACTGGTTCAACCGCGACTGGGGCGCCGCGACGTTCTTCGACATCGGCACCGCGACCGATGCATGGGGC
GAGCGCGTGTTTTACCCGGGCGTGGGCGTCGGTGCACGCTGGCGCAGCCCGGTCGGCCCGATCAACGTCGACGTCGCGTA
CGGCTTGCGCAACCACAGCGTGCGCCCGTACCTGACGCTCGGCATCGCTTTCTGA

Upstream 100 bases:

>100_bases
TGGCACTCTTTCACAATCGTTTGGCTGTGACGCCGGCGCCCTGTGGTCAAATACAGGGTTTTCCACGAAACCGTAACCAT
CCAGGACGGCGAGGTCATAT

Downstream 100 bases:

>100_bases
ACCCGCCGCCCTATTGACGACGACCCGCACGACGAACCGCATGACGAAGGACCCGAACGACACGCCGCCGCCTCACGATC
CGGATTCGCCCGACGGCGCG

Product: surface antigen (D15)

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 604; Mature: 603

Protein sequence:

>604_residues
MAGQSNQQAHTAHHAGPRAARDRAGAAARVARAALAGCLAACFALPAHAKYDVDIDAPRSIRKLLKTHLDIARFAKRDDI
SDDQFDFLVTATPQQVRDLTATAGYFSPVVRTDVRTRDGKRDVHIAVDPGKQTVVSTVDLTFKGPVETEDPKQETATRFA
FSMKPGDPFTQSDWDDAKGAALRQLQSRRYLGAKIVSSEARIDPRTQRATLAVAFDSGPTFTIGKVDVDGVRRYPEKIVT
NVNPLSEGEIYDVQRIAELQRQLQNTPYYASVAIDVGDDTSKPERTPVHVKVSEFPYNNIRGGVGFATDTGPHVQGSYTY
LDTFGAAWPLTVSGRLDQIQQYGQVQLSMPPGEKGWTNSVLASYTNTNVSDTRIYSARVGVQRTRTGQFIDYAYSLMYYQ
DRLDQNGAGPTTSRALVPQWAWTRRNVDDPLFPRSGNLIHAEAGFAVKGVLADESFIRGYARGQQYLPIGKRDLFVFRAE
LGGVFTSGSSTGVPASLLFRAGGSNSVRGYGYQSIGNSVDGSVLPTKYLMTGTAEYQHWFNRDWGAATFFDIGTATDAWG
ERVFYPGVGVGARWRSPVGPINVDVAYGLRNHSVRPYLTLGIAF

Sequences:

>Translated_604_residues
MAGQSNQQAHTAHHAGPRAARDRAGAAARVARAALAGCLAACFALPAHAKYDVDIDAPRSIRKLLKTHLDIARFAKRDDI
SDDQFDFLVTATPQQVRDLTATAGYFSPVVRTDVRTRDGKRDVHIAVDPGKQTVVSTVDLTFKGPVETEDPKQETATRFA
FSMKPGDPFTQSDWDDAKGAALRQLQSRRYLGAKIVSSEARIDPRTQRATLAVAFDSGPTFTIGKVDVDGVRRYPEKIVT
NVNPLSEGEIYDVQRIAELQRQLQNTPYYASVAIDVGDDTSKPERTPVHVKVSEFPYNNIRGGVGFATDTGPHVQGSYTY
LDTFGAAWPLTVSGRLDQIQQYGQVQLSMPPGEKGWTNSVLASYTNTNVSDTRIYSARVGVQRTRTGQFIDYAYSLMYYQ
DRLDQNGAGPTTSRALVPQWAWTRRNVDDPLFPRSGNLIHAEAGFAVKGVLADESFIRGYARGQQYLPIGKRDLFVFRAE
LGGVFTSGSSTGVPASLLFRAGGSNSVRGYGYQSIGNSVDGSVLPTKYLMTGTAEYQHWFNRDWGAATFFDIGTATDAWG
ERVFYPGVGVGARWRSPVGPINVDVAYGLRNHSVRPYLTLGIAF
>Mature_603_residues
AGQSNQQAHTAHHAGPRAARDRAGAAARVARAALAGCLAACFALPAHAKYDVDIDAPRSIRKLLKTHLDIARFAKRDDIS
DDQFDFLVTATPQQVRDLTATAGYFSPVVRTDVRTRDGKRDVHIAVDPGKQTVVSTVDLTFKGPVETEDPKQETATRFAF
SMKPGDPFTQSDWDDAKGAALRQLQSRRYLGAKIVSSEARIDPRTQRATLAVAFDSGPTFTIGKVDVDGVRRYPEKIVTN
VNPLSEGEIYDVQRIAELQRQLQNTPYYASVAIDVGDDTSKPERTPVHVKVSEFPYNNIRGGVGFATDTGPHVQGSYTYL
DTFGAAWPLTVSGRLDQIQQYGQVQLSMPPGEKGWTNSVLASYTNTNVSDTRIYSARVGVQRTRTGQFIDYAYSLMYYQD
RLDQNGAGPTTSRALVPQWAWTRRNVDDPLFPRSGNLIHAEAGFAVKGVLADESFIRGYARGQQYLPIGKRDLFVFRAEL
GGVFTSGSSTGVPASLLFRAGGSNSVRGYGYQSIGNSVDGSVLPTKYLMTGTAEYQHWFNRDWGAATFFDIGTATDAWGE
RVFYPGVGVGARWRSPVGPINVDVAYGLRNHSVRPYLTLGIAF

Specific function: Unknown

COG id: COG0729

COG function: function code M; Outer membrane protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: To E.coli ytfM [H]

Homologues:

Organism=Escherichia coli, GI1790666, Length=530, Percent_Identity=26.6037735849057, Blast_Score=144, Evalue=1e-35,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000184 [H]

Pfam domain/function: PF01103 Bac_surface_Ag [H]

EC number: NA

Molecular weight: Translated: 66194; Mature: 66062

Theoretical pI: Translated: 9.33; Mature: 9.33

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
0.8 %Met     (Translated Protein)
1.2 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
0.7 %Met     (Mature Protein)
1.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAGQSNQQAHTAHHAGPRAARDRAGAAARVARAALAGCLAACFALPAHAKYDVDIDAPRS
CCCCCCCCHHHHHCCCCHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCCEEECCCCCCHH
IRKLLKTHLDIARFAKRDDISDDQFDFLVTATPQQVRDLTATAGYFSPVVRTDVRTRDGK
HHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCHHHHHHHHHHHHHHHHHHHHCCCCCCCC
RDVHIAVDPGKQTVVSTVDLTFKGPVETEDPKQETATRFAFSMKPGDPFTQSDWDDAKGA
CEEEEEECCCCCEEEEEEEEEEECCCCCCCCHHHHHHEEEEEECCCCCCCCCCCCCCCHH
ALRQLQSRRYLGAKIVSSEARIDPRTQRATLAVAFDSGPTFTIGKVDVDGVRRYPEKIVT
HHHHHHHHHHHCCEEECCCCCCCCCCCEEEEEEEECCCCEEEEEECCHHHHHHHHHHHHC
NVNPLSEGEIYDVQRIAELQRQLQNTPYYASVAIDVGDDTSKPERTPVHVKVSEFPYNNI
CCCCCCCCCCHHHHHHHHHHHHHHCCCEEEEEEEECCCCCCCCCCCEEEEEEECCCCCCC
RGGVGFATDTGPHVQGSYTYLDTFGAAWPLTVSGRLDQIQQYGQVQLSMPPGEKGWTNSV
CCCCCCCCCCCCCCCCCEEEEECCCCCCCEEECCCHHHHHHCCCEEEECCCCCCCCCCHH
LASYTNTNVSDTRIYSARVGVQRTRTGQFIDYAYSLMYYQDRLDQNGAGPTTSRALVPQW
HHEECCCCCCCEEEEEECCCCEECCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCC
AWTRRNVDDPLFPRSGNLIHAEAGFAVKGVLADESFIRGYARGQQYLPIGKRDLFVFRAE
HHHCCCCCCCCCCCCCCEEEECCCCEEEEEECCHHHHHHHHCCCCCCCCCCCEEEEEEEE
LGGVFTSGSSTGVPASLLFRAGGSNSVRGYGYQSIGNSVDGSVLPTKYLMTGTAEYQHWF
CCCEEECCCCCCCCCEEEEECCCCCCCCCCCHHHHCCCCCCCCCCCHHEEECCHHHHHHH
NRDWGAATFFDIGTATDAWGERVFYPGVGVGARWRSPVGPINVDVAYGLRNHSVRPYLTL
CCCCCCEEEEECCCCCCCCCCEEEECCCCCCCCCCCCCCCEEEEEEECCCCCCCCCEEEE
GIAF
EEEC
>Mature Secondary Structure 
AGQSNQQAHTAHHAGPRAARDRAGAAARVARAALAGCLAACFALPAHAKYDVDIDAPRS
CCCCCCCHHHHHCCCCHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCCEEECCCCCCHH
IRKLLKTHLDIARFAKRDDISDDQFDFLVTATPQQVRDLTATAGYFSPVVRTDVRTRDGK
HHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCHHHHHHHHHHHHHHHHHHHHCCCCCCCC
RDVHIAVDPGKQTVVSTVDLTFKGPVETEDPKQETATRFAFSMKPGDPFTQSDWDDAKGA
CEEEEEECCCCCEEEEEEEEEEECCCCCCCCHHHHHHEEEEEECCCCCCCCCCCCCCCHH
ALRQLQSRRYLGAKIVSSEARIDPRTQRATLAVAFDSGPTFTIGKVDVDGVRRYPEKIVT
HHHHHHHHHHHCCEEECCCCCCCCCCCEEEEEEEECCCCEEEEEECCHHHHHHHHHHHHC
NVNPLSEGEIYDVQRIAELQRQLQNTPYYASVAIDVGDDTSKPERTPVHVKVSEFPYNNI
CCCCCCCCCCHHHHHHHHHHHHHHCCCEEEEEEEECCCCCCCCCCCEEEEEEECCCCCCC
RGGVGFATDTGPHVQGSYTYLDTFGAAWPLTVSGRLDQIQQYGQVQLSMPPGEKGWTNSV
CCCCCCCCCCCCCCCCCEEEEECCCCCCCEEECCCHHHHHHCCCEEEECCCCCCCCCCHH
LASYTNTNVSDTRIYSARVGVQRTRTGQFIDYAYSLMYYQDRLDQNGAGPTTSRALVPQW
HHEECCCCCCCEEEEEECCCCEECCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCC
AWTRRNVDDPLFPRSGNLIHAEAGFAVKGVLADESFIRGYARGQQYLPIGKRDLFVFRAE
HHHCCCCCCCCCCCCCCEEEECCCCEEEEEECCHHHHHHHHCCCCCCCCCCCEEEEEEEE
LGGVFTSGSSTGVPASLLFRAGGSNSVRGYGYQSIGNSVDGSVLPTKYLMTGTAEYQHWF
CCCEEECCCCCCCCCEEEEECCCCCCCCCCCHHHHCCCCCCCCCCCHHEEECCHHHHHHH
NRDWGAATFFDIGTATDAWGERVFYPGVGVGARWRSPVGPINVDVAYGLRNHSVRPYLTL
CCCCCCEEEEECCCCCCCCCCEEEECCCCCCCCCCCCCCCEEEEEEECCCCCCCCCEEEE
GIAF
EEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 7542800; 10675023 [H]