| Definition | Burkholderia cenocepacia HI2424 chromosome 1, complete sequence. |
|---|---|
| Accession | NC_008542 |
| Length | 3,483,902 |
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The map label for this gene is 116690443
Identifier: 116690443
GI number: 116690443
Start: 2687245
End: 2688432
Strand: Reverse
Name: 116690443
Synonym: Bcen2424_2423
Alternate gene names: NA
Gene position: 2688432-2687245 (Counterclockwise)
Preceding gene: 116690444
Following gene: 116690437
Centisome position: 77.17
GC content: 69.78
Gene sequence:
>1188_bases ATGACGCTTCGAGGAATCGTCTGGCTCGCGGTCCTGTTCGCGATCGCCGCGGCGCTCGCCACCGTCGGCCGTTTCGACGC GGGGCAGGTGCTGCTCGTCTATCCGCCGTACCGGATCGACGTGTCGCTGAACCTGTTCGTGATCGCCATCGTCGTGCTGT TCATCGTCGTGTACGCGCTGCTGCGCATCGTGCGCAACATCTGGCGCATGCCGCAGCGGGTCGCCGCGTATCGAGCGCGT TCGCGCAACGAGAAGGCGCAGGCGTCGCTGCGCGATGCGATCGCGAACCTGTACGCGGGCCGCTTCTCGCGTGCGGAGAA GGCCGCGCGCGAAGCGCTGACCGTCGACGCGAACCTGGGCGCCGCGAGTCTCGTCGGGGCCACGGCCGCGCACCGGATGC ACGAGTACACGCGCCGCGACGACTGGCTGTCGAAGGTCGACGCGCCCGAATGGCAGGATGCACGGCTGCTCGCCGCGGCC GACATGCGCGCGGACGCCCGCGACGCCGACGGCGCGCTCGCCGCGCTGGCCGACATGCAGGCCGGCGGCAAGCGCATTCA TGCGCAGCAGGTCGCGTTGCGTGCCCAGCAGCAACTGAAGAACTGGGCCGAAGTGCTGAAGCTCGCGAAGGCGCTCGAAA AGCGCGAGGCGCTGCATCCGGCCGCGGCCGTGCGGCTGCGCCAGCAGGCAGCGGAAAACCTGCTGCGCGAACGCCGGCAC GATCCGGACGCGCTGCTCGAAGTGTGGCAGTCGCTGTCGCCGGTCGAGCGCCAGTCGCCGCGTCTGGCCGATCTCGCGGC CGAGCTGCTGGTGCCGCTCGAGCGCCGCAACGAAGCGCGCCGCATCGTCGAGGACGCGCTCGCGCACAACTGGGATGCAC GCCTGCTGCGCCGTTATCCGGACACGGCCGGCGCCGATGCGCTGCCGCTGATCCAGAAGGCCGAAGGCTGGAAGAAGGAT CATCCGGAAGATGCCGACCTGCTGTTCGCGCTCGGCCGCCTCTGCCAGCAGCAGCAGCTGTGGGGCAAGGCCCAGTCGTT CCTCGAATCGGCGCTGAAGCTGGCCGACAACGAGGCGCTGAAGGTGCGGGCGCATCGTGCGCTCGCCCGCCTGTTCGAGC ACCTCGGCGAAACCGACAAGGCCGCGAAGCACTACCGCGAAAGCGCGCTGGCGATTACCGTCGTGTGA
Upstream 100 bases:
>100_bases ATCTGCTCAAGCAGGTTGACGGCGCATCGCTGACGGTCGCGGTGCCGAACCTGAACACGAGCCTGAACGCCGTTCAGCAG TTCAAGAGCCGGGGGTAACG
Downstream 100 bases:
>100_bases CGCTGCGCGGCAGCTGCGCTGCGTACAAAGCCCCGAACGGCGATCGGCCTTCGGGGCTTTTTTTCGCCTGTGGCGAGGCA GGGGCGGCCCGCAGCGCGTT
Product: HemY domain-containing protein
Products: NA
Alternate protein names: HemY Protein; HemY Domain-Containing Protein; Protein Porphyrin Biosynthesis; HemY-Like Protein; HemY-Like; HemY N-Terminal Domain Protein; HemY N-Terminal; Protoheme Ix Synthesis Protein; Porphyrin Biosynthesis Protein; Protoheme IX Synthesis Protein; HemY N-Terminal Domain-Containing Protein; Metal Dependent Phosphohydrolase; HemY Protein N-Terminus Family Protein
Number of amino acids: Translated: 395; Mature: 394
Protein sequence:
>395_residues MTLRGIVWLAVLFAIAAALATVGRFDAGQVLLVYPPYRIDVSLNLFVIAIVVLFIVVYALLRIVRNIWRMPQRVAAYRAR SRNEKAQASLRDAIANLYAGRFSRAEKAAREALTVDANLGAASLVGATAAHRMHEYTRRDDWLSKVDAPEWQDARLLAAA DMRADARDADGALAALADMQAGGKRIHAQQVALRAQQQLKNWAEVLKLAKALEKREALHPAAAVRLRQQAAENLLRERRH DPDALLEVWQSLSPVERQSPRLADLAAELLVPLERRNEARRIVEDALAHNWDARLLRRYPDTAGADALPLIQKAEGWKKD HPEDADLLFALGRLCQQQQLWGKAQSFLESALKLADNEALKVRAHRALARLFEHLGETDKAAKHYRESALAITVV
Sequences:
>Translated_395_residues MTLRGIVWLAVLFAIAAALATVGRFDAGQVLLVYPPYRIDVSLNLFVIAIVVLFIVVYALLRIVRNIWRMPQRVAAYRAR SRNEKAQASLRDAIANLYAGRFSRAEKAAREALTVDANLGAASLVGATAAHRMHEYTRRDDWLSKVDAPEWQDARLLAAA DMRADARDADGALAALADMQAGGKRIHAQQVALRAQQQLKNWAEVLKLAKALEKREALHPAAAVRLRQQAAENLLRERRH DPDALLEVWQSLSPVERQSPRLADLAAELLVPLERRNEARRIVEDALAHNWDARLLRRYPDTAGADALPLIQKAEGWKKD HPEDADLLFALGRLCQQQQLWGKAQSFLESALKLADNEALKVRAHRALARLFEHLGETDKAAKHYRESALAITVV >Mature_394_residues TLRGIVWLAVLFAIAAALATVGRFDAGQVLLVYPPYRIDVSLNLFVIAIVVLFIVVYALLRIVRNIWRMPQRVAAYRARS RNEKAQASLRDAIANLYAGRFSRAEKAAREALTVDANLGAASLVGATAAHRMHEYTRRDDWLSKVDAPEWQDARLLAAAD MRADARDADGALAALADMQAGGKRIHAQQVALRAQQQLKNWAEVLKLAKALEKREALHPAAAVRLRQQAAENLLRERRHD PDALLEVWQSLSPVERQSPRLADLAAELLVPLERRNEARRIVEDALAHNWDARLLRRYPDTAGADALPLIQKAEGWKKDH PEDADLLFALGRLCQQQQLWGKAQSFLESALKLADNEALKVRAHRALARLFEHLGETDKAAKHYRESALAITVV
Specific function: Unknown
COG id: COG3071
COG function: function code H; Uncharacterized enzyme of heme biosynthesis
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 44145; Mature: 44014
Theoretical pI: Translated: 10.21; Mature: 10.21
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 1.5 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 1.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTLRGIVWLAVLFAIAAALATVGRFDAGQVLLVYPPYRIDVSLNLFVIAIVVLFIVVYAL CCCHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCEEEEEHHHHHHHHHHHHHHHHHHH LRIVRNIWRMPQRVAAYRARSRNEKAQASLRDAIANLYAGRFSRAEKAAREALTVDANLG HHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC AASLVGATAAHRMHEYTRRDDWLSKVDAPEWQDARLLAAADMRADARDADGALAALADMQ HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHCCCCCCCCHHHHHHHHHH AGGKRIHAQQVALRAQQQLKNWAEVLKLAKALEKREALHPAAAVRLRQQAAENLLRERRH CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC DPDALLEVWQSLSPVERQSPRLADLAAELLVPLERRNEARRIVEDALAHNWDARLLRRYP CHHHHHHHHHHCCCHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCC DTAGADALPLIQKAEGWKKDHPEDADLLFALGRLCQQQQLWGKAQSFLESALKLADNEAL CCCCCCHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHH KVRAHRALARLFEHLGETDKAAKHYRESALAITVV HHHHHHHHHHHHHHHCCHHHHHHHHHHHCEEEEEC >Mature Secondary Structure TLRGIVWLAVLFAIAAALATVGRFDAGQVLLVYPPYRIDVSLNLFVIAIVVLFIVVYAL CCHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCEEEEEHHHHHHHHHHHHHHHHHHH LRIVRNIWRMPQRVAAYRARSRNEKAQASLRDAIANLYAGRFSRAEKAAREALTVDANLG HHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC AASLVGATAAHRMHEYTRRDDWLSKVDAPEWQDARLLAAADMRADARDADGALAALADMQ HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHCCCCCCCCHHHHHHHHHH AGGKRIHAQQVALRAQQQLKNWAEVLKLAKALEKREALHPAAAVRLRQQAAENLLRERRH CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC DPDALLEVWQSLSPVERQSPRLADLAAELLVPLERRNEARRIVEDALAHNWDARLLRRYP CHHHHHHHHHHCCCHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCC DTAGADALPLIQKAEGWKKDHPEDADLLFALGRLCQQQQLWGKAQSFLESALKLADNEAL CCCCCCHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHH KVRAHRALARLFEHLGETDKAAKHYRESALAITVV HHHHHHHHHHHHHHHCCHHHHHHHHHHHCEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA