| Definition | Burkholderia cenocepacia HI2424 chromosome 1, complete sequence. |
|---|---|
| Accession | NC_008542 |
| Length | 3,483,902 |
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The map label for this gene is nadE [H]
Identifier: 116690432
GI number: 116690432
Start: 2673036
End: 2674754
Strand: Reverse
Name: nadE [H]
Synonym: Bcen2424_2412
Alternate gene names: 116690432
Gene position: 2674754-2673036 (Counterclockwise)
Preceding gene: 116690434
Following gene: 116690431
Centisome position: 76.77
GC content: 68.0
Gene sequence:
>1719_bases ATGAAGACCCGACTCGCTCTCGCCCAGATCAACGTCACCGTCGGCGATTTCGCCGGCAACGTCGCGCGGATCGTCGCGGC CGCACGCGCCGCGCACAACGATGGTGCGCAACTGATGGTCGCACCCGAACTCGCGCTGTCCGGCTATCCACCCGAAGACC TGCTGCTGCGGCCCGCGTTCTACGCGGCGGCGGCCGCCGCGCTCGATGCGCTCGCCGACGCGCTGAAAGCGTTCGACGGG CTCGCGGTGCTGGTCGGCCACCCGTTGCGCGGTCCGGGCAGCGGGGCGGGCGACGATGCGCGCGCGTCAGCCGTCGATGG TAATGCAAACCGCCCGATCGAGCGCGGCGTGCCGCCTACCGACACCTTCAACGCGGTATCGCTGATCGTCGGCGGCGAGA TCGTCGGCACCTACCGCAAGCAGGATCTGCCGAACGCCGAGGTGTTCGACGAGAAACGCTATTTCGCGACCGACACCGAG CCGCTCGTGTTCGAGCTGAACGGCGTGAAATACGGCGTGATCATCTGCGAGGACGCGTGGCATGCGTCGGCCGCGCAGAT CGCGAAGGCGGCCGGCGCGCAGGTGCTGCTGATCCCGAACGGCTCGCCGTATCACCTGAACAAGGAAGCGGTGCGCATCG ACATCCTGCGCGCGCGGATTCGCGAGACCGGGCTGCCGATGGTGTACGTGAACCTCGTCGGTGGCCAGGACGAACTCGTG TTCGACGGCGGGTCGTTCGTGCTCGACGGCGAGGGCGGGCTCGTCGCGAAGATGCCGCAGTTCGACGAAGGGCACGCGAT CGTCGAATTCGACGGCGCGCGGCCACTGCCCGGCGCGATCGCGCCCGAGCTGTCGACCGACGCGCAGGTGTACCGCGCGC TCGTGACCGGCGTGCGCGACTACATCGGCAAGAACGGTTTTCCCGGCGTGCTGATCGGGCTGTCGGGCGGCGTCGATTCG GCGCTGGTGCTGGCCGTCGCATGTGATGCGCTCGGGCCCGAGCGCGTGCGCGCGGTGATGATGCCGTCGCGCTTCACGGC CGACATCTCGACGACGGACGCGGCGGAGATGGCGCGGCGCGTCGGCGTACGCTACGACGAGATCGCGATCGCGCCGATGT TCGATGCGTTCCGCGTCGCGCTCGCGGGCGAATTCGCGGGCCGCGCGGAAGACGCGACGGAGGAGAACATCCAGGCGCGT ATCCGCGGCACGCTGCTGATGGCGCTGTCGAACAAGTTCGGCTCGATCGTGCTGACGACTGGCAACAAGAGCGAGATGGC GGTCGGCTATTGCACGTTGTACGGCGACATGGCCGGCGGTTTCGCGGTGATCAAGGACATCGCGAAGACGCTCGTGTACC GGCTGTGCCGCTATCGCAACGCAACGACCGACTACGGGCTGCGCGACGTGATTCCCGAGCGAATCCTGACGCGCGCGCCG TCGGCCGAGCTGCGCGAGAACCAGACCGACCAGGACAGCCTGCCGCCATACGACGTGCTCGACGCGATCATGCGGATGTA CATGGAAGAAGACCGGCCGCTCGCCGAGATTGTCGCGGCCGGCTATGCGCAGGCCGACGTCGAGCGCGTGACGCGGCTCA TCAAGATCAACGAATACAAGCGCCGCCAGGCGCCGATCGGCATCCGCGTCACGCATCGCGCGTTCGGGCGCGACTGGCGC TACCCGATCACGTCACGCTTCACCGAACGGCTCGATTGA
Upstream 100 bases:
>100_bases CGTACCGTTGGATGTTGCCGGATGCGGGCCGCCGTGGCCCGCATCCGGGTCGATTTCGTCAGCCGTTCAAGGCGCGCCGC CGGGTTGCGCCGATCCCGCC
Downstream 100 bases:
>100_bases GCCGTGCTGGGCCGGAGGCGGCCCGCCGGCTTACAATCGGGAACGCGATTTTTCATCCAAACGAGCATTGAGGGACAACC ATCATGAAACGCATCACCGC
Product: NAD synthetase
Products: NA
Alternate protein names: NAD(+) synthase [glutamine-hydrolysing] [H]
Number of amino acids: Translated: 572; Mature: 572
Protein sequence:
>572_residues MKTRLALAQINVTVGDFAGNVARIVAAARAAHNDGAQLMVAPELALSGYPPEDLLLRPAFYAAAAAALDALADALKAFDG LAVLVGHPLRGPGSGAGDDARASAVDGNANRPIERGVPPTDTFNAVSLIVGGEIVGTYRKQDLPNAEVFDEKRYFATDTE PLVFELNGVKYGVIICEDAWHASAAQIAKAAGAQVLLIPNGSPYHLNKEAVRIDILRARIRETGLPMVYVNLVGGQDELV FDGGSFVLDGEGGLVAKMPQFDEGHAIVEFDGARPLPGAIAPELSTDAQVYRALVTGVRDYIGKNGFPGVLIGLSGGVDS ALVLAVACDALGPERVRAVMMPSRFTADISTTDAAEMARRVGVRYDEIAIAPMFDAFRVALAGEFAGRAEDATEENIQAR IRGTLLMALSNKFGSIVLTTGNKSEMAVGYCTLYGDMAGGFAVIKDIAKTLVYRLCRYRNATTDYGLRDVIPERILTRAP SAELRENQTDQDSLPPYDVLDAIMRMYMEEDRPLAEIVAAGYAQADVERVTRLIKINEYKRRQAPIGIRVTHRAFGRDWR YPITSRFTERLD
Sequences:
>Translated_572_residues MKTRLALAQINVTVGDFAGNVARIVAAARAAHNDGAQLMVAPELALSGYPPEDLLLRPAFYAAAAAALDALADALKAFDG LAVLVGHPLRGPGSGAGDDARASAVDGNANRPIERGVPPTDTFNAVSLIVGGEIVGTYRKQDLPNAEVFDEKRYFATDTE PLVFELNGVKYGVIICEDAWHASAAQIAKAAGAQVLLIPNGSPYHLNKEAVRIDILRARIRETGLPMVYVNLVGGQDELV FDGGSFVLDGEGGLVAKMPQFDEGHAIVEFDGARPLPGAIAPELSTDAQVYRALVTGVRDYIGKNGFPGVLIGLSGGVDS ALVLAVACDALGPERVRAVMMPSRFTADISTTDAAEMARRVGVRYDEIAIAPMFDAFRVALAGEFAGRAEDATEENIQAR IRGTLLMALSNKFGSIVLTTGNKSEMAVGYCTLYGDMAGGFAVIKDIAKTLVYRLCRYRNATTDYGLRDVIPERILTRAP SAELRENQTDQDSLPPYDVLDAIMRMYMEEDRPLAEIVAAGYAQADVERVTRLIKINEYKRRQAPIGIRVTHRAFGRDWR YPITSRFTERLD >Mature_572_residues MKTRLALAQINVTVGDFAGNVARIVAAARAAHNDGAQLMVAPELALSGYPPEDLLLRPAFYAAAAAALDALADALKAFDG LAVLVGHPLRGPGSGAGDDARASAVDGNANRPIERGVPPTDTFNAVSLIVGGEIVGTYRKQDLPNAEVFDEKRYFATDTE PLVFELNGVKYGVIICEDAWHASAAQIAKAAGAQVLLIPNGSPYHLNKEAVRIDILRARIRETGLPMVYVNLVGGQDELV FDGGSFVLDGEGGLVAKMPQFDEGHAIVEFDGARPLPGAIAPELSTDAQVYRALVTGVRDYIGKNGFPGVLIGLSGGVDS ALVLAVACDALGPERVRAVMMPSRFTADISTTDAAEMARRVGVRYDEIAIAPMFDAFRVALAGEFAGRAEDATEENIQAR IRGTLLMALSNKFGSIVLTTGNKSEMAVGYCTLYGDMAGGFAVIKDIAKTLVYRLCRYRNATTDYGLRDVIPERILTRAP SAELRENQTDQDSLPPYDVLDAIMRMYMEEDRPLAEIVAAGYAQADVERVTRLIKINEYKRRQAPIGIRVTHRAFGRDWR YPITSRFTERLD
Specific function: Can use both glutamine or ammonia as a nitrogen source [H]
COG id: COG0171
COG function: function code H; NAD synthase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Contains 1 CN hydrolase domain [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR014445 - InterPro: IPR022310 - InterPro: IPR003694 - InterPro: IPR000132 - InterPro: IPR003010 - InterPro: IPR014729 [H]
Pfam domain/function: PF00795 CN_hydrolase; PF02540 NAD_synthase [H]
EC number: =6.3.5.1 [H]
Molecular weight: Translated: 61621; Mature: 61621
Theoretical pI: Translated: 4.97; Mature: 4.97
Prosite motif: PS50263 CN_HYDROLASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKTRLALAQINVTVGDFAGNVARIVAAARAAHNDGAQLMVAPELALSGYPPEDLLLRPAF CCCEEEEEEEEEEEHHHCCHHHHHHHHHHHCCCCCCEEEEECCHHHCCCCCHHHEECHHH YAAAAAALDALADALKAFDGLAVLVGHPLRGPGSGAGDDARASAVDGNANRPIERGVPPT HHHHHHHHHHHHHHHHHHCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCHHCCCCCC DTFNAVSLIVGGEIVGTYRKQDLPNAEVFDEKRYFATDTEPLVFELNGVKYGVIICEDAW CCCCCEEEEECCCEEECHHHCCCCCCHHCCCCCEEECCCCCEEEEECCEEEEEEEECCCC HASAAQIAKAAGAQVLLIPNGSPYHLNKEAVRIDILRARIRETGLPMVYVNLVGGQDELV CCHHHHHHHHCCCEEEEEECCCCCEECHHHHHHHHHHHHHHHCCCCEEEEEEECCCCEEE FDGGSFVLDGEGGLVAKMPQFDEGHAIVEFDGARPLPGAIAPELSTDAQVYRALVTGVRD EECCCEEEECCCCEEEECCCCCCCCEEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHH YIGKNGFPGVLIGLSGGVDSALVLAVACDALGPERVRAVMMPSRFTADISTTDAAEMARR HHCCCCCCEEEEEECCCCCHHHHHHHHHHCCCHHHHHEEECCCCEECCCCCCCHHHHHHH VGVRYDEIAIAPMFDAFRVALAGEFAGRAEDATEENIQARIRGTLLMALSNKFGSIVLTT HCCCCHHEEEEHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHEEEEECCCCCEEEEEE GNKSEMAVGYCTLYGDMAGGFAVIKDIAKTLVYRLCRYRNATTDYGLRDVIPERILTRAP CCCCCEEEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHCCC SAELRENQTDQDSLPPYDVLDAIMRMYMEEDRPLAEIVAAGYAQADVERVTRLIKINEYK CHHHHCCCCCCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHCCHHHHHHHHHHHHHHHHHH RRQAPIGIRVTHRAFGRDWRYPITSRFTERLD HHCCCCEEEEEHHHCCCCCCCCHHHHHHHHCC >Mature Secondary Structure MKTRLALAQINVTVGDFAGNVARIVAAARAAHNDGAQLMVAPELALSGYPPEDLLLRPAF CCCEEEEEEEEEEEHHHCCHHHHHHHHHHHCCCCCCEEEEECCHHHCCCCCHHHEECHHH YAAAAAALDALADALKAFDGLAVLVGHPLRGPGSGAGDDARASAVDGNANRPIERGVPPT HHHHHHHHHHHHHHHHHHCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCHHCCCCCC DTFNAVSLIVGGEIVGTYRKQDLPNAEVFDEKRYFATDTEPLVFELNGVKYGVIICEDAW CCCCCEEEEECCCEEECHHHCCCCCCHHCCCCCEEECCCCCEEEEECCEEEEEEEECCCC HASAAQIAKAAGAQVLLIPNGSPYHLNKEAVRIDILRARIRETGLPMVYVNLVGGQDELV CCHHHHHHHHCCCEEEEEECCCCCEECHHHHHHHHHHHHHHHCCCCEEEEEEECCCCEEE FDGGSFVLDGEGGLVAKMPQFDEGHAIVEFDGARPLPGAIAPELSTDAQVYRALVTGVRD EECCCEEEECCCCEEEECCCCCCCCEEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHH YIGKNGFPGVLIGLSGGVDSALVLAVACDALGPERVRAVMMPSRFTADISTTDAAEMARR HHCCCCCCEEEEEECCCCCHHHHHHHHHHCCCHHHHHEEECCCCEECCCCCCCHHHHHHH VGVRYDEIAIAPMFDAFRVALAGEFAGRAEDATEENIQARIRGTLLMALSNKFGSIVLTT HCCCCHHEEEEHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHEEEEECCCCCEEEEEE GNKSEMAVGYCTLYGDMAGGFAVIKDIAKTLVYRLCRYRNATTDYGLRDVIPERILTRAP CCCCCEEEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHCCC SAELRENQTDQDSLPPYDVLDAIMRMYMEEDRPLAEIVAAGYAQADVERVTRLIKINEYK CHHHHCCCCCCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHCCHHHHHHHHHHHHHHHHHH RRQAPIGIRVTHRAFGRDWRYPITSRFTERLD HHCCCCEEEEEHHHCCCCCCCCHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 10910347 [H]