Click here to switch to the map view.

The map label for this gene is yhhW [C]

Identifier: 116690423

GI number: 116690423

Start: 2664903

End: 2665607

Strand: Reverse

Name: yhhW [C]

Synonym: Bcen2424_2403

Alternate gene names: 116690423

Gene position: 2665607-2664903 (Counterclockwise)

Preceding gene: 116690428

Following gene: 116690421

Centisome position: 76.51

GC content: 73.19

Gene sequence:

>705_bases
ATGTTCCAGATCCTGCGCGCCGAAGACCGCTGCCGCACGCACCACGGCTGGCTCGAATCGAGTCACAGCTTTTCGTCCGT
CTGCCGCGACGGGCATGCGCCGGTGCGTCCGCCCGTCGGCGCGCTGTGCGTGCTGAGCGAGGACCGGATCGCGCCGACGC
GCGGTTTCGGGATGCAGCCGCGCCGCGACGTCGAAATCCTCACCTACGTGCTGGATGGCGAGCTCGCGCACCGCGACAGC
CTTGGCTGCGGCGCGATCGTCCGGACTGGCGGCATTCAGCGGATGAGCGCCGGCACGGGGCTCGTGCACAGCGAAACCAA
CGCGTCGCGCGACCGGCCGCTGCATCTGCTGCAGATCTGGCTGCAGCCGGCCGAACGGGGCGGGCGGCCCGGCTACGAGG
AACGGCGTTTCGCCGATGACGAGAAGCGCGGCCGGCTGAGGCTCGTCGCGGCGCCCGACGGCGGCGACGGCGCGCTGTCG
GTGCGGGCCGACGCCCGCATCTTCGCGGGGCTGATCGACGGCGACGAGACGGCGGCGTTCGACGTGCCGGCCGGACGCAG
CATCTACGTGCACGTCGTGCGCGGCGAGGTCGAGGTCAACGGCCGCGCGCTGGCGGCCGGCGACGGCGCGCGGATCGGCG
GCGTGGATGCGGTGGCGTTCGCGCGTGGCCGCACGGCCGAGGTGCTGCTGTTCGACGTCGCCTGA

Upstream 100 bases:

>100_bases
AACGATGCGGTGCGCGGGCGGCGGATTGTGGCGCTGCCGGCCTCCCCTTACAGTGGAGGTAAACCCGAACAGAACATCCG
CGCCCCGAGCGTCCGCCCCA

Downstream 100 bases:

>100_bases
AACGAAAAGGGGACGCAGGCTGGTGCCTGCGTCCCCTTCGATGCCGCTGCGGGAGCGGCCCGCCGGCTTACTGCGCCGGC
GCCGACGCGCCCTTCGCGGC

Product: pirin domain-containing protein

Products: NA

Alternate protein names: Putative quercetinase; Pirin-like protein sll1773 [H]

Number of amino acids: Translated: 234; Mature: 234

Protein sequence:

>234_residues
MFQILRAEDRCRTHHGWLESSHSFSSVCRDGHAPVRPPVGALCVLSEDRIAPTRGFGMQPRRDVEILTYVLDGELAHRDS
LGCGAIVRTGGIQRMSAGTGLVHSETNASRDRPLHLLQIWLQPAERGGRPGYEERRFADDEKRGRLRLVAAPDGGDGALS
VRADARIFAGLIDGDETAAFDVPAGRSIYVHVVRGEVEVNGRALAAGDGARIGGVDAVAFARGRTAEVLLFDVA

Sequences:

>Translated_234_residues
MFQILRAEDRCRTHHGWLESSHSFSSVCRDGHAPVRPPVGALCVLSEDRIAPTRGFGMQPRRDVEILTYVLDGELAHRDS
LGCGAIVRTGGIQRMSAGTGLVHSETNASRDRPLHLLQIWLQPAERGGRPGYEERRFADDEKRGRLRLVAAPDGGDGALS
VRADARIFAGLIDGDETAAFDVPAGRSIYVHVVRGEVEVNGRALAAGDGARIGGVDAVAFARGRTAEVLLFDVA
>Mature_234_residues
MFQILRAEDRCRTHHGWLESSHSFSSVCRDGHAPVRPPVGALCVLSEDRIAPTRGFGMQPRRDVEILTYVLDGELAHRDS
LGCGAIVRTGGIQRMSAGTGLVHSETNASRDRPLHLLQIWLQPAERGGRPGYEERRFADDEKRGRLRLVAAPDGGDGALS
VRADARIFAGLIDGDETAAFDVPAGRSIYVHVVRGEVEVNGRALAAGDGARIGGVDAVAFARGRTAEVLLFDVA

Specific function: Putative quercetin 2,3-dioxygenase [H]

COG id: COG1741

COG function: function code R; Pirin-related protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the pirin family [H]

Homologues:

Organism=Escherichia coli, GI1789847, Length=233, Percent_Identity=40.343347639485, Blast_Score=175, Evalue=3e-45,
Organism=Escherichia coli, GI1789493, Length=228, Percent_Identity=29.3859649122807, Blast_Score=88, Evalue=4e-19,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011051
- InterPro:   IPR012093
- InterPro:   IPR003829
- InterPro:   IPR014710 [H]

Pfam domain/function: PF02678 Pirin [H]

EC number: =1.13.11.24 [H]

Molecular weight: Translated: 25214; Mature: 25214

Theoretical pI: Translated: 6.95; Mature: 6.95

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFQILRAEDRCRTHHGWLESSHSFSSVCRDGHAPVRPPVGALCVLSEDRIAPTRGFGMQP
CCEEECCCHHHHHHCCCCCCCCCHHHHHHCCCCCCCCCCCEEEEEECCCCCCCCCCCCCC
RRDVEILTYVLDGELAHRDSLGCGAIVRTGGIQRMSAGTGLVHSETNASRDRPLHLLQIW
CCCEEEEEEEECCCCCCCCCCCCCEEEECCCCEEECCCCCEEECCCCCCCCCCCEEEHEE
LQPAERGGRPGYEERRFADDEKRGRLRLVAAPDGGDGALSVRADARIFAGLIDGDETAAF
HHHHHHCCCCCCHHHCCCCCCCCCCEEEEECCCCCCCEEEEEECCEEEEEEECCCCCEEE
DVPAGRSIYVHVVRGEVEVNGRALAAGDGARIGGVDAVAFARGRTAEVLLFDVA
ECCCCCEEEEEEEEEEEEECCEEEECCCCCEECCCEEEEECCCCEEEEEEEEEC
>Mature Secondary Structure
MFQILRAEDRCRTHHGWLESSHSFSSVCRDGHAPVRPPVGALCVLSEDRIAPTRGFGMQP
CCEEECCCHHHHHHCCCCCCCCCHHHHHHCCCCCCCCCCCEEEEEECCCCCCCCCCCCCC
RRDVEILTYVLDGELAHRDSLGCGAIVRTGGIQRMSAGTGLVHSETNASRDRPLHLLQIW
CCCEEEEEEEECCCCCCCCCCCCCEEEECCCCEEECCCCCEEECCCCCCCCCCCEEEHEE
LQPAERGGRPGYEERRFADDEKRGRLRLVAAPDGGDGALSVRADARIFAGLIDGDETAAF
HHHHHHCCCCCCHHHCCCCCCCCCCEEEEECCCCCCCEEEEEECCEEEEEEECCCCCEEE
DVPAGRSIYVHVVRGEVEVNGRALAAGDGARIGGVDAVAFARGRTAEVLLFDVA
ECCCCCEEEEEEEEEEEEECCEEEECCCCCEECCCEEEEECCCCEEEEEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8905231 [H]