| Definition | Burkholderia cenocepacia HI2424 chromosome 1, complete sequence. |
|---|---|
| Accession | NC_008542 |
| Length | 3,483,902 |
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The map label for this gene is eco [H]
Identifier: 116690407
GI number: 116690407
Start: 2650684
End: 2651184
Strand: Reverse
Name: eco [H]
Synonym: Bcen2424_2387
Alternate gene names: 116690407
Gene position: 2651184-2650684 (Counterclockwise)
Preceding gene: 116690409
Following gene: 116690405
Centisome position: 76.1
GC content: 69.06
Gene sequence:
>501_bases ATGACATTCGCGATCCGGGCCGCGCTGGCCGCCCTCTGCGTGACGACCGCCGCCGCATGCGTGGCCGCGCCGGCCTCCGC GCCCGCCGTGCCGGCCGAGTCGATCAAGATGTTCCCGCAGGCCGCGACCGGCCAGCAGCGCGTCGTGATCGCGCTGCCCG CGCTCGAGAACGAGGGCGATGCGCGCGTCGAGCTGATGATTGGCAAGACGCTGCAGACCGACTGCAACCAGCAGTGGTTC GGCGGCGAGCTGACCGCCGAGGACGTGAAGGGCTGGGGCTATACGTATTACCGGCTCACCGACGTAAAGGGGCCGGCATC GACGCTGATGGCGTGCCCGGGCCAGGCGCCGCAGCAACGGTTCGTGCAGGTGCGCGGCGACGGTCAACTGCTGCGCTACA ACAGCCGCCTGCCGCTCGTCGTCTATGTACCGGACGGCTTCGACGTGCGTTATCGCGTGTGGCACGCGTCGAAGGACGTG CAGCAGGCTGCGAAGCAGTAA
Upstream 100 bases:
>100_bases TGCCGGCTGTTTGCAATTGTGTCGCCAAATTACAGCTTCGTAAGGTCTTGCGACGAAAGTGTTAGCATCCGGGGCTCATT TGTTTTTCAGGAGCACATCG
Downstream 100 bases:
>100_bases CCTTTCCTTTCGGCGGCGTCCTGCCGCTACACACTGGCCGCGCTGCTCGTACCGACGAGCGCCGGCCAAGCGGCCAGCGC GGCCTGCGCAATGGCCTCCA
Product: ecotin
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 166; Mature: 165
Protein sequence:
>166_residues MTFAIRAALAALCVTTAAACVAAPASAPAVPAESIKMFPQAATGQQRVVIALPALENEGDARVELMIGKTLQTDCNQQWF GGELTAEDVKGWGYTYYRLTDVKGPASTLMACPGQAPQQRFVQVRGDGQLLRYNSRLPLVVYVPDGFDVRYRVWHASKDV QQAAKQ
Sequences:
>Translated_166_residues MTFAIRAALAALCVTTAAACVAAPASAPAVPAESIKMFPQAATGQQRVVIALPALENEGDARVELMIGKTLQTDCNQQWF GGELTAEDVKGWGYTYYRLTDVKGPASTLMACPGQAPQQRFVQVRGDGQLLRYNSRLPLVVYVPDGFDVRYRVWHASKDV QQAAKQ >Mature_165_residues TFAIRAALAALCVTTAAACVAAPASAPAVPAESIKMFPQAATGQQRVVIALPALENEGDARVELMIGKTLQTDCNQQWFG GELTAEDVKGWGYTYYRLTDVKGPASTLMACPGQAPQQRFVQVRGDGQLLRYNSRLPLVVYVPDGFDVRYRVWHASKDVQ QAAKQ
Specific function: General inhibitor of family S1 serine proteases [H]
COG id: COG4574
COG function: function code R; Serine protease inhibitor ecotin
Gene ontology:
Cell location: Periplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the protease inhibitor I11 (ecotin) family [H]
Homologues:
Organism=Escherichia coli, GI1788538, Length=148, Percent_Identity=45.945945945946, Blast_Score=142, Evalue=1e-35,
Paralogues:
None
Copy number: 260 Molecules/Cell In: Stationary Phase, Rich Media (Based on E. coli). [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005658 - InterPro: IPR023189 - InterPro: IPR023084 [H]
Pfam domain/function: PF03974 Ecotin [H]
EC number: NA
Molecular weight: Translated: 17989; Mature: 17858
Theoretical pI: Translated: 8.31; Mature: 8.31
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.4 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 4.8 %Cys+Met (Translated Protein) 2.4 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 4.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTFAIRAALAALCVTTAAACVAAPASAPAVPAESIKMFPQAATGQQRVVIALPALENEGD CCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHCCCCCCCCCEEEEEEECCCCCCC ARVELMIGKTLQTDCNQQWFGGELTAEDVKGWGYTYYRLTDVKGPASTLMACPGQAPQQR CEEEEEECCCCCCCCCCCCCCCCCCHHHCCCCCEEEEEEEECCCCHHHHEECCCCCCCHH FVQVRGDGQLLRYNSRLPLVVYVPDGFDVRYRVWHASKDVQQAAKQ EEEECCCCEEEEECCCCCEEEECCCCCCEEEEEEECCHHHHHHHCC >Mature Secondary Structure TFAIRAALAALCVTTAAACVAAPASAPAVPAESIKMFPQAATGQQRVVIALPALENEGD CCHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHCCCCCCCCCEEEEEEECCCCCCC ARVELMIGKTLQTDCNQQWFGGELTAEDVKGWGYTYYRLTDVKGPASTLMACPGQAPQQR CEEEEEECCCCCCCCCCCCCCCCCCHHHCCCCCEEEEEEEECCCCHHHHEECCCCCCCHH FVQVRGDGQLLRYNSRLPLVVYVPDGFDVRYRVWHASKDVQQAAKQ EEEECCCCEEEEECCCCCEEEECCCCCCEEEEEEECCHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA