| Definition | Burkholderia cenocepacia HI2424 chromosome 1, complete sequence. |
|---|---|
| Accession | NC_008542 |
| Length | 3,483,902 |
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The map label for this gene is 116690397
Identifier: 116690397
GI number: 116690397
Start: 2643439
End: 2643759
Strand: Reverse
Name: 116690397
Synonym: Bcen2424_2377
Alternate gene names: NA
Gene position: 2643759-2643439 (Counterclockwise)
Preceding gene: 116690398
Following gene: 116690395
Centisome position: 75.88
GC content: 57.94
Gene sequence:
>321_bases TTGGTGAACCCAAACCGACGGGAGACGAAGATGGCACTGACCAATGATCAACTGGCCGAGCTTCTGGTAGGTATCGCGCG GTCACAAAAGGCAATCACCGATGCAGTCAAGCTTCATCTCGGGCAAGCCGACGGCCCGAGATTCCAAGCAGGTGCTTTGA TCCCTACTCTCCAAGGCGCGGCTGCCATTGCGAATCGCGGGCAGCCGACCTTTCATGATCTTCCGTCGCGAATATTGCTG CAAATCCAAGGAGATCCTCGCCCTGGGACGCCGCGCATCGAGGAATGGGTGGCGCAGGAGTTGAATCGATTGGCGCCGTA G
Upstream 100 bases:
>100_bases TCGTAAGCTACCTCGGACAGAATTTCCCGCTAATCAGTGATCCGCTCCTTGATGGCGGCGGCGGGCGCGATACTGCAACT GTATCTAACTGAGGCTATGC
Downstream 100 bases:
>100_bases CTATTCGGAAATCCACATCCCACCATGAAATGACTCGTACTCCTTGATAGCGGCGGCGCGTGCGTGCCAGGGAAAGGTTA CGAGATATGGGTCGAGCGCG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 106; Mature: 106
Protein sequence:
>106_residues MVNPNRRETKMALTNDQLAELLVGIARSQKAITDAVKLHLGQADGPRFQAGALIPTLQGAAAIANRGQPTFHDLPSRILL QIQGDPRPGTPRIEEWVAQELNRLAP
Sequences:
>Translated_106_residues MVNPNRRETKMALTNDQLAELLVGIARSQKAITDAVKLHLGQADGPRFQAGALIPTLQGAAAIANRGQPTFHDLPSRILL QIQGDPRPGTPRIEEWVAQELNRLAP >Mature_106_residues MVNPNRRETKMALTNDQLAELLVGIARSQKAITDAVKLHLGQADGPRFQAGALIPTLQGAAAIANRGQPTFHDLPSRILL QIQGDPRPGTPRIEEWVAQELNRLAP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 11536; Mature: 11536
Theoretical pI: Translated: 10.46; Mature: 10.46
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 1.9 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVNPNRRETKMALTNDQLAELLVGIARSQKAITDAVKLHLGQADGPRFQAGALIPTLQGA CCCCCCCCHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHH AAIANRGQPTFHDLPSRILLQIQGDPRPGTPRIEEWVAQELNRLAP HHHHCCCCCCHHHCCHHEEEEECCCCCCCCCHHHHHHHHHHHHCCC >Mature Secondary Structure MVNPNRRETKMALTNDQLAELLVGIARSQKAITDAVKLHLGQADGPRFQAGALIPTLQGA CCCCCCCCHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHH AAIANRGQPTFHDLPSRILLQIQGDPRPGTPRIEEWVAQELNRLAP HHHHCCCCCCHHHCCHHEEEEECCCCCCCCCHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA