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The map label for this gene is intB [H]

Identifier: 116690384

GI number: 116690384

Start: 2629830

End: 2631044

Strand: Direct

Name: intB [H]

Synonym: Bcen2424_2364

Alternate gene names: 116690384

Gene position: 2629830-2631044 (Clockwise)

Preceding gene: 116690383

Following gene: 116690389

Centisome position: 75.49

GC content: 64.12

Gene sequence:

>1215_bases
ATGCCTCTCACTGACATACAGGTGCGGAACGCTAAGGCCAGCGCGGCACCATACAAACTGACGGACGGCAACGGGATGTT
CTTGCTCGTCCAACCGAACGGCGCGAAGTACTGGCGCTTGTCCTACCGCTTCCGTGGCAAGCAGAAGACGCTCGCCCTCG
GCGTCTATCCGGCCGTCACGCTTGCGACGGCACGGAAGAAGCGCGACGAGGCCCGCGAGCAGATCGCAGCCGGCATCGAT
CCGGGCGAGGCGAAGAAGGACGCAAGACGGGCCGCCGAGATCGCGGCGGCAAACTCATTCGAAGCGGTAGCCCGCGAGTG
GTTCGACTCCCAGCGCCCGGGCTGGAGCGACGGCTACGCGGAGAAGGTGCTGAATTCGCTTGAGGTCGACGTGTTCCCGA
AGATCGGTGCTCGCCCGATCGCGGAGATCGACTCGCCGCAGATGCTCAGCATCGTTCGCGAGGTCGAGGCGCGCGGGGTG
CGTGAGACGGCGAAGCGAATCCTCCAACGCTCGCGCGCGGTCTTCCAGTACGGGATCATGACCGGGCGATGCTCCAGGAA
TCCGGCAGCCGACATCGACGCGCAGACGGTCTTGAAGAAGGGGCCCGGCGTACAGCACATGGCCCGCGTGAAGGCGACGG
AGATTCCGCAGCTCATGCGAGACATCGACGCTTACCAAGGCGACCTAGTCACCCGGCTCGCGCTCCGCCTGATGGCACTA
ACGTTTGTGCGGACAACGGAAATGATCCGTGCGGAGTGGTCGGAGTTTGACGAGGCCGCCGCAGAATGGCGCGTACCGCC
GGAACGCATGAAGATGCGCGACCCGCACATCGTGCCGCTCTCACGGCAGGCACTCGACGTGCTCGCCCAGCTCCGCGCGC
TCAACGGCCAGCATCGATTCGTGTTCTACAGCGTGCAAGGCCGGAGTCACATCTCGAACAACACCATGCTCTACGCGCTC
TATCGCATGGGCTACAAGTCGCGGATGACGGGGCATGGCTTTCGCGGACTCGCCGCCACGGCTCTACGTGAACTCGGCTT
TGGCCGGGACGTTGTAGAGCGCCAGATGGCGCACGCCGAGCGCAATCAGGTGACGGCTGCCTACGTCCACGCTGAATATC
TGCCCGAGCGCAGACGAATGATGCAGGCGTGGGGTGATCATCTCGACCAGCTCAAAGCGGGAGCCGAGGTCATCCGCATT
GCGTCAGCCCGTTAA

Upstream 100 bases:

>100_bases
CTCTAGCTCCTATCGTTACCCAAGGTTGCTCAGTGACAGCCAGAGAAAGTGTTGGTATTTTTGTTGGTATCAGCCGATAC
CAACAACACAGATACCAACA

Downstream 100 bases:

>100_bases
TGAATCGCCGTCGCCCTTGCGACTTCGCCCACCTCCCTGCACCAACAACGATCGGAGCGAATACGTGCTGTGGTTGCCCA
AACGATGGATCAGTTAGAGC

Product: phage integrase family protein

Products: NA

Alternate protein names: Int(P4) [H]

Number of amino acids: Translated: 404; Mature: 403

Protein sequence:

>404_residues
MPLTDIQVRNAKASAAPYKLTDGNGMFLLVQPNGAKYWRLSYRFRGKQKTLALGVYPAVTLATARKKRDEAREQIAAGID
PGEAKKDARRAAEIAAANSFEAVAREWFDSQRPGWSDGYAEKVLNSLEVDVFPKIGARPIAEIDSPQMLSIVREVEARGV
RETAKRILQRSRAVFQYGIMTGRCSRNPAADIDAQTVLKKGPGVQHMARVKATEIPQLMRDIDAYQGDLVTRLALRLMAL
TFVRTTEMIRAEWSEFDEAAAEWRVPPERMKMRDPHIVPLSRQALDVLAQLRALNGQHRFVFYSVQGRSHISNNTMLYAL
YRMGYKSRMTGHGFRGLAATALRELGFGRDVVERQMAHAERNQVTAAYVHAEYLPERRRMMQAWGDHLDQLKAGAEVIRI
ASAR

Sequences:

>Translated_404_residues
MPLTDIQVRNAKASAAPYKLTDGNGMFLLVQPNGAKYWRLSYRFRGKQKTLALGVYPAVTLATARKKRDEAREQIAAGID
PGEAKKDARRAAEIAAANSFEAVAREWFDSQRPGWSDGYAEKVLNSLEVDVFPKIGARPIAEIDSPQMLSIVREVEARGV
RETAKRILQRSRAVFQYGIMTGRCSRNPAADIDAQTVLKKGPGVQHMARVKATEIPQLMRDIDAYQGDLVTRLALRLMAL
TFVRTTEMIRAEWSEFDEAAAEWRVPPERMKMRDPHIVPLSRQALDVLAQLRALNGQHRFVFYSVQGRSHISNNTMLYAL
YRMGYKSRMTGHGFRGLAATALRELGFGRDVVERQMAHAERNQVTAAYVHAEYLPERRRMMQAWGDHLDQLKAGAEVIRI
ASAR
>Mature_403_residues
PLTDIQVRNAKASAAPYKLTDGNGMFLLVQPNGAKYWRLSYRFRGKQKTLALGVYPAVTLATARKKRDEAREQIAAGIDP
GEAKKDARRAAEIAAANSFEAVAREWFDSQRPGWSDGYAEKVLNSLEVDVFPKIGARPIAEIDSPQMLSIVREVEARGVR
ETAKRILQRSRAVFQYGIMTGRCSRNPAADIDAQTVLKKGPGVQHMARVKATEIPQLMRDIDAYQGDLVTRLALRLMALT
FVRTTEMIRAEWSEFDEAAAEWRVPPERMKMRDPHIVPLSRQALDVLAQLRALNGQHRFVFYSVQGRSHISNNTMLYALY
RMGYKSRMTGHGFRGLAATALRELGFGRDVVERQMAHAERNQVTAAYVHAEYLPERRRMMQAWGDHLDQLKAGAEVIRIA
SAR

Specific function: Unknown

COG id: COG0582

COG function: function code L; Integrase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the 'phage' integrase family [H]

Homologues:

Organism=Escherichia coli, GI1788974, Length=400, Percent_Identity=36.75, Blast_Score=263, Evalue=2e-71,
Organism=Escherichia coli, GI145693166, Length=399, Percent_Identity=38.5964912280702, Blast_Score=255, Evalue=4e-69,
Organism=Escherichia coli, GI1788690, Length=391, Percent_Identity=35.8056265984655, Blast_Score=245, Evalue=3e-66,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011010
- InterPro:   IPR013762
- InterPro:   IPR002104
- InterPro:   IPR023109 [H]

Pfam domain/function: PF00589 Phage_integrase [H]

EC number: NA

Molecular weight: Translated: 45540; Mature: 45409

Theoretical pI: Translated: 10.52; Mature: 10.52

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
4.0 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
3.7 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPLTDIQVRNAKASAAPYKLTDGNGMFLLVQPNGAKYWRLSYRFRGKQKTLALGVYPAVT
CCCCCCEEECCCCCCCCEEEECCCEEEEEEECCCCCEEEEEEEECCCCCEEEEECHHHHH
LATARKKRDEAREQIAAGIDPGEAKKDARRAAEIAAANSFEAVAREWFDSQRPGWSDGYA
HHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCCCCHHH
EKVLNSLEVDVFPKIGARPIAEIDSPQMLSIVREVEARGVRETAKRILQRSRAVFQYGIM
HHHHHHCCCEECCCCCCCCCCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCE
TGRCSRNPAADIDAQTVLKKGPGVQHMARVKATEIPQLMRDIDAYQGDLVTRLALRLMAL
ECCCCCCCCCCCCHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
TFVRTTEMIRAEWSEFDEAAAEWRVPPERMKMRDPHIVPLSRQALDVLAQLRALNGQHRF
HHHHHHHHHHHHHHHHHHHHHHCCCCHHHHCCCCCCCCCCCHHHHHHHHHHHHCCCCCEE
VFYSVQGRSHISNNTMLYALYRMGYKSRMTGHGFRGLAATALRELGFGRDVVERQMAHAE
EEEEECCCCCCCCCHHHHHHHHCCHHHCCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHH
RNQVTAAYVHAEYLPERRRMMQAWGDHLDQLKAGAEVIRIASAR
HHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure 
PLTDIQVRNAKASAAPYKLTDGNGMFLLVQPNGAKYWRLSYRFRGKQKTLALGVYPAVT
CCCCCEEECCCCCCCCEEEECCCEEEEEEECCCCCEEEEEEEECCCCCEEEEECHHHHH
LATARKKRDEAREQIAAGIDPGEAKKDARRAAEIAAANSFEAVAREWFDSQRPGWSDGYA
HHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCCCCHHH
EKVLNSLEVDVFPKIGARPIAEIDSPQMLSIVREVEARGVRETAKRILQRSRAVFQYGIM
HHHHHHCCCEECCCCCCCCCCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCE
TGRCSRNPAADIDAQTVLKKGPGVQHMARVKATEIPQLMRDIDAYQGDLVTRLALRLMAL
ECCCCCCCCCCCCHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
TFVRTTEMIRAEWSEFDEAAAEWRVPPERMKMRDPHIVPLSRQALDVLAQLRALNGQHRF
HHHHHHHHHHHHHHHHHHHHHHCCCCHHHHCCCCCCCCCCCHHHHHHHHHHHHCCCCCEE
VFYSVQGRSHISNNTMLYALYRMGYKSRMTGHGFRGLAATALRELGFGRDVVERQMAHAE
EEEEECCCCCCCCCHHHHHHHHCCHHHCCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHH
RNQVTAAYVHAEYLPERRRMMQAWGDHLDQLKAGAEVIRIASAR
HHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 7610040; 9278503 [H]