| Definition | Burkholderia cenocepacia HI2424 chromosome 1, complete sequence. |
|---|---|
| Accession | NC_008542 |
| Length | 3,483,902 |
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The map label for this gene is 116690375
Identifier: 116690375
GI number: 116690375
Start: 2618377
End: 2619582
Strand: Direct
Name: 116690375
Synonym: Bcen2424_2355
Alternate gene names: NA
Gene position: 2618377-2619582 (Clockwise)
Preceding gene: 116690374
Following gene: 116690377
Centisome position: 75.16
GC content: 67.91
Gene sequence:
>1206_bases ATGACAACCGTCGAAGTCGAAGCGACCGCGCGTGTCGAAGAGGCACCGGCATCCCTATGGGCCTTGTTCAAGGTCGTCGC CGGCATTTCGGCCGTTTCGTGGGGCGGACTTTCGATGATGGCGCAACTCGAACGCCATTACGTGGAGCGGCTGCGGCGCA TCGAGCCGCACGTCTTCGGCGATCTCGTCGCGCTCGCATGGCTCGTCCCGGGCCCCGTCGGCTGCAACGTCGCCGTGCAG GTCGGCCAGACGCTGCATGGCCGTGCCGGCGCCTGGGTCGCCGGCATCGCGAGCGTGCTGCCGTTCTCGATCCTGATGAC GCTGTTCGCGATCTTCTATCAGACGCCGCTCGTGCGCTCGCTTGCCGCGCCGATGCTGATCAATCACTTCGGCATGGTGC TCGCCGCGCTGATCGGCGTCACGTGGGTCAAGCAGGTGCGCTCGCTCGCGCGCACGCGGCTCGAACAGGCGATCGCCGCA CTATCGACGATTCTGCTCGCTTTCGCGCATAGTCCGGCCGCTTTCGTCGGGATTCTGTTCGCCGCGTTTGCAGCGGGCTG GCTGACGGGGCCGCCGCAGCGCGACGCGGTCGATTTCACGCTGTCGAAGCGCGACCGCACCCTGCTCGTGCTGCTCGGCG TGCTCGTCGTGCTGTTCGCGGTGCCGCTGCCCGGCGATTACCAGGCGGAATTGCTATGGCCGCGCCTCGCGGGCGCCGGC ATGACGCTGTTCGGCGGCGGCTTCTCCGCGCTGCCGGTGCTCAAGACGCTGTTCGTCTCGCCGGCGACCGGCATCTCCGA TCACGACTTCACGCTGGCGTTCGCGCTGTCGCCGGTCGCGCCGGGGCCGTTGCTGAACGTCGTGCCGTTTCTCGGCTATC TGACCGACGGATGGGTCGGCGCGCTGCTCGCCACGGCCGCGCTGTTCATTCCGTCGGGATGCCTCGTCGTGTTTGCGCAG AACCATCTGCTCCGGCTCAAGCGCCATTCGCGCTTCGAGCACGGGATGCGCCTGCTGCGCGCGGCGACGACCGGCTTTCT CGTGGTCGCCGTCGTGAAAATCCTGCATCGCGAACCGGCCGACCCGGTTTACTGGCTGACGGGCGCGTTCGCCACGCTGT GCTTCACGCGCTTCAAGGTGCCCGTCTATGCCGTGTACGGCGCGGTCGCCGTGGTGTGCAGCGTGTGGCTGTGGGCCGCG CGCTGA
Upstream 100 bases:
>100_bases TGTCATGATGCGCAGCGGACAATCGGGAGGGCCGACGTGTCGGCGGGCCGCCGGCACGGCCATACGCGAGAGATCTGGCC CTGCGCCAACCACACCAATC
Downstream 100 bases:
>100_bases CGGGCGCCGGCCGTCGCCCTGTCCGGTCTGGTCCGCCTCACCCGCTCAACCTGCCTGCACCGTAACCCGGCGTGCCATCC AGCGGGCGCGCAGCGCGTCG
Product: chromate transporter
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 401; Mature: 400
Protein sequence:
>401_residues MTTVEVEATARVEEAPASLWALFKVVAGISAVSWGGLSMMAQLERHYVERLRRIEPHVFGDLVALAWLVPGPVGCNVAVQ VGQTLHGRAGAWVAGIASVLPFSILMTLFAIFYQTPLVRSLAAPMLINHFGMVLAALIGVTWVKQVRSLARTRLEQAIAA LSTILLAFAHSPAAFVGILFAAFAAGWLTGPPQRDAVDFTLSKRDRTLLVLLGVLVVLFAVPLPGDYQAELLWPRLAGAG MTLFGGGFSALPVLKTLFVSPATGISDHDFTLAFALSPVAPGPLLNVVPFLGYLTDGWVGALLATAALFIPSGCLVVFAQ NHLLRLKRHSRFEHGMRLLRAATTGFLVVAVVKILHREPADPVYWLTGAFATLCFTRFKVPVYAVYGAVAVVCSVWLWAA R
Sequences:
>Translated_401_residues MTTVEVEATARVEEAPASLWALFKVVAGISAVSWGGLSMMAQLERHYVERLRRIEPHVFGDLVALAWLVPGPVGCNVAVQ VGQTLHGRAGAWVAGIASVLPFSILMTLFAIFYQTPLVRSLAAPMLINHFGMVLAALIGVTWVKQVRSLARTRLEQAIAA LSTILLAFAHSPAAFVGILFAAFAAGWLTGPPQRDAVDFTLSKRDRTLLVLLGVLVVLFAVPLPGDYQAELLWPRLAGAG MTLFGGGFSALPVLKTLFVSPATGISDHDFTLAFALSPVAPGPLLNVVPFLGYLTDGWVGALLATAALFIPSGCLVVFAQ NHLLRLKRHSRFEHGMRLLRAATTGFLVVAVVKILHREPADPVYWLTGAFATLCFTRFKVPVYAVYGAVAVVCSVWLWAA R >Mature_400_residues TTVEVEATARVEEAPASLWALFKVVAGISAVSWGGLSMMAQLERHYVERLRRIEPHVFGDLVALAWLVPGPVGCNVAVQV GQTLHGRAGAWVAGIASVLPFSILMTLFAIFYQTPLVRSLAAPMLINHFGMVLAALIGVTWVKQVRSLARTRLEQAIAAL STILLAFAHSPAAFVGILFAAFAAGWLTGPPQRDAVDFTLSKRDRTLLVLLGVLVVLFAVPLPGDYQAELLWPRLAGAGM TLFGGGFSALPVLKTLFVSPATGISDHDFTLAFALSPVAPGPLLNVVPFLGYLTDGWVGALLATAALFIPSGCLVVFAQN HLLRLKRHSRFEHGMRLLRAATTGFLVVAVVKILHREPADPVYWLTGAFATLCFTRFKVPVYAVYGAVAVVCSVWLWAAR
Specific function: Unknown
COG id: COG2059
COG function: function code P; Chromate transport protein ChrA
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the chromate ion transporter (CHR) (TC 2.A.51) family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003370 - InterPro: IPR014047 [H]
Pfam domain/function: PF02417 Chromate_transp [H]
EC number: NA
Molecular weight: Translated: 43102; Mature: 42970
Theoretical pI: Translated: 10.01; Mature: 10.01
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTTVEVEATARVEEAPASLWALFKVVAGISAVSWGGLSMMAQLERHYVERLRRIEPHVFG CCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCHHHH DLVALAWLVPGPVGCNVAVQVGQTLHGRAGAWVAGIASVLPFSILMTLFAIFYQTPLVRS HHHHHHHHCCCCCCCCHHEECCCHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LAAPMLINHFGMVLAALIGVTWVKQVRSLARTRLEQAIAALSTILLAFAHSPAAFVGILF HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHH AAFAAGWLTGPPQRDAVDFTLSKRDRTLLVLLGVLVVLFAVPLPGDYQAELLWPRLAGAG HHHHHHHCCCCCCCCCEEEEECCCCCHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHCCCC MTLFGGGFSALPVLKTLFVSPATGISDHDFTLAFALSPVAPGPLLNVVPFLGYLTDGWVG CEEECCCCHHHHHHHHHHCCCCCCCCCCCEEEEEEECCCCCCHHHHHHHHHHHHHHHHHH ALLATAALFIPSGCLVVFAQNHLLRLKRHSRFEHGMRLLRAATTGFLVVAVVKILHREPA HHHHHHHHHHCCCHHEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC DPVYWLTGAFATLCFTRFKVPVYAVYGAVAVVCSVWLWAAR CCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure TTVEVEATARVEEAPASLWALFKVVAGISAVSWGGLSMMAQLERHYVERLRRIEPHVFG CEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCHHHH DLVALAWLVPGPVGCNVAVQVGQTLHGRAGAWVAGIASVLPFSILMTLFAIFYQTPLVRS HHHHHHHHCCCCCCCCHHEECCCHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LAAPMLINHFGMVLAALIGVTWVKQVRSLARTRLEQAIAALSTILLAFAHSPAAFVGILF HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHH AAFAAGWLTGPPQRDAVDFTLSKRDRTLLVLLGVLVVLFAVPLPGDYQAELLWPRLAGAG HHHHHHHCCCCCCCCCEEEEECCCCCHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHCCCC MTLFGGGFSALPVLKTLFVSPATGISDHDFTLAFALSPVAPGPLLNVVPFLGYLTDGWVG CEEECCCCHHHHHHHHHHCCCCCCCCCCCEEEEEEECCCCCCHHHHHHHHHHHHHHHHHH ALLATAALFIPSGCLVVFAQNHLLRLKRHSRFEHGMRLLRAATTGFLVVAVVKILHREPA HHHHHHHHHHCCCHHEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC DPVYWLTGAFATLCFTRFKVPVYAVYGAVAVVCSVWLWAAR CCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 8688087 [H]