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The map label for this gene is speE [H]

Identifier: 116690360

GI number: 116690360

Start: 2601916

End: 2602833

Strand: Reverse

Name: speE [H]

Synonym: Bcen2424_2339

Alternate gene names: 116690360

Gene position: 2602833-2601916 (Counterclockwise)

Preceding gene: 116690365

Following gene: 116690359

Centisome position: 74.71

GC content: 68.19

Gene sequence:

>918_bases
ATGACCCGACTGATCAAGCGCGCGTCCGCCGAGGCACGCGCGTTCAAGCAACGCAAGCCGTCCGCCTACAACGGCTCCGA
AAAACTCCAGCCGCCGCGCGTGAAGCGCCGCCCGGACATCGACGAACACGACGACGTGCCGGTGCTCGAAGCGCCGCGCA
AGCCGCGTTTCGCGCCCGTGACGTTCTCCGAAGAAGGCGGCGTGCGCTTCCTGCACTTCGGGACCGAGTGGGTGCAGGGC
GCGATGCGGATCTCGAAGCCGCTGCATATCGAGCTCGAATACGCGCAGCAGATGATGGCCTGGCTGCTGTTCCTCGAAAC
GCCGGAGCGGATCGTCCAGCTCGGGCTCGGCACCGGCGCGCTGACCAAGTTCTCGCATCGTTTCCTGCCGCACGCGAAGG
TCGAGGCCGTCGAGCTGAACCCGGCCGTGATCGTCGCCGCGCGCACGATGTTCGCGCTGCCGCCCGACGACGCGCGCCTC
GCGGTGCACGAAGCCGACGCATGGGACTTCGTCAACGACCCGGCCAACCGCGGCACGGCGGGCGCGATCCAGATCGACCT
GTACGACGCGACCGCGCGCGGCCCCGTGCTCGACAGCGTCGCGTTCTACCGCGCGGTGCGCGGCTGCCTCGCCGATGCCG
GCATCGCGACGATCAACCTGTTCGGCGATCATCCGAGCTTCGTGCGCAACATGAAGCACCTGAATGCGGCGTTCGACCAC
CGCGTGATCGCGCTGCCCGAAGTGCACGACGGCAACCGCATCGCGATCGCGTTTTCGGGCCCCGCGCTCGACGTGCCGTT
CGCCCAGCTCGACGCCCGCGCGAAGCTGATCGAGGACACGCTCAAGCTGCCCGCGCGCAAGTGGGTGAAAGCTTTGAAAG
CAACGGACGGCGCACGCGACACCGCGTTCGCGATCTGA

Upstream 100 bases:

>100_bases
GACGTCACGTGTGGCGGGGCACGCGTCGGCGGCCTCCGCCTCCCACCAATGCTATCCTCTCGTCCGCTCATCCAGCGTCA
CCCAGCGAGATTCAACCATC

Downstream 100 bases:

>100_bases
CGCCGGACGCACCGGCGCAGGCCGGCGCATCCGCGTGACAAGGGGCGGATCACCTCGGGTTCGCCCCTGCTTGACCGCGT
ACTCGCGGCTCCTATACTGG

Product: spermidine synthase-like protein

Products: NA

Alternate protein names: Putrescine aminopropyltransferase; PAPT; SPDSY [H]

Number of amino acids: Translated: 305; Mature: 304

Protein sequence:

>305_residues
MTRLIKRASAEARAFKQRKPSAYNGSEKLQPPRVKRRPDIDEHDDVPVLEAPRKPRFAPVTFSEEGGVRFLHFGTEWVQG
AMRISKPLHIELEYAQQMMAWLLFLETPERIVQLGLGTGALTKFSHRFLPHAKVEAVELNPAVIVAARTMFALPPDDARL
AVHEADAWDFVNDPANRGTAGAIQIDLYDATARGPVLDSVAFYRAVRGCLADAGIATINLFGDHPSFVRNMKHLNAAFDH
RVIALPEVHDGNRIAIAFSGPALDVPFAQLDARAKLIEDTLKLPARKWVKALKATDGARDTAFAI

Sequences:

>Translated_305_residues
MTRLIKRASAEARAFKQRKPSAYNGSEKLQPPRVKRRPDIDEHDDVPVLEAPRKPRFAPVTFSEEGGVRFLHFGTEWVQG
AMRISKPLHIELEYAQQMMAWLLFLETPERIVQLGLGTGALTKFSHRFLPHAKVEAVELNPAVIVAARTMFALPPDDARL
AVHEADAWDFVNDPANRGTAGAIQIDLYDATARGPVLDSVAFYRAVRGCLADAGIATINLFGDHPSFVRNMKHLNAAFDH
RVIALPEVHDGNRIAIAFSGPALDVPFAQLDARAKLIEDTLKLPARKWVKALKATDGARDTAFAI
>Mature_304_residues
TRLIKRASAEARAFKQRKPSAYNGSEKLQPPRVKRRPDIDEHDDVPVLEAPRKPRFAPVTFSEEGGVRFLHFGTEWVQGA
MRISKPLHIELEYAQQMMAWLLFLETPERIVQLGLGTGALTKFSHRFLPHAKVEAVELNPAVIVAARTMFALPPDDARLA
VHEADAWDFVNDPANRGTAGAIQIDLYDATARGPVLDSVAFYRAVRGCLADAGIATINLFGDHPSFVRNMKHLNAAFDHR
VIALPEVHDGNRIAIAFSGPALDVPFAQLDARAKLIEDTLKLPARKWVKALKATDGARDTAFAI

Specific function: Catalyzes the production of spermidine from putrescine and decarboxylated S-adenosylmethionine (dcSAM), which serves as an aminopropyl donor [H]

COG id: COG0421

COG function: function code E; Spermidine synthase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the spermidine/spermine synthase family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001045 [H]

Pfam domain/function: PF01564 Spermine_synth [H]

EC number: =2.5.1.16 [H]

Molecular weight: Translated: 33752; Mature: 33621

Theoretical pI: Translated: 9.40; Mature: 9.40

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTRLIKRASAEARAFKQRKPSAYNGSEKLQPPRVKRRPDIDEHDDVPVLEAPRKPRFAPV
CCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEE
TFSEEGGVRFLHFGTEWVQGAMRISKPLHIELEYAQQMMAWLLFLETPERIVQLGLGTGA
EECCCCCEEEEECCHHHHHHHHHCCCCEEEEHHHHHHHHHHHHHHCCHHHHHHHCCCCCH
LTKFSHRFLPHAKVEAVELNPAVIVAARTMFALPPDDARLAVHEADAWDFVNDPANRGTA
HHHHHHHCCCCCCEEEEECCCEEEEEEHHEEECCCCCCEEEEEECCCCCCCCCCCCCCCC
GAIQIDLYDATARGPVLDSVAFYRAVRGCLADAGIATINLFGDHPSFVRNMKHLNAAFDH
EEEEEEEEECCCCCCHHHHHHHHHHHHHHHHCCCEEEEEEECCCHHHHHHHHHHHHHHCC
RVIALPEVHDGNRIAIAFSGPALDVPFAQLDARAKLIEDTLKLPARKWVKALKATDGARD
EEEECCCCCCCCEEEEEECCCCCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCC
TAFAI
CEECC
>Mature Secondary Structure 
TRLIKRASAEARAFKQRKPSAYNGSEKLQPPRVKRRPDIDEHDDVPVLEAPRKPRFAPV
CHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEE
TFSEEGGVRFLHFGTEWVQGAMRISKPLHIELEYAQQMMAWLLFLETPERIVQLGLGTGA
EECCCCCEEEEECCHHHHHHHHHCCCCEEEEHHHHHHHHHHHHHHCCHHHHHHHCCCCCH
LTKFSHRFLPHAKVEAVELNPAVIVAARTMFALPPDDARLAVHEADAWDFVNDPANRGTA
HHHHHHHCCCCCCEEEEECCCEEEEEEHHEEECCCCCCEEEEEECCCCCCCCCCCCCCCC
GAIQIDLYDATARGPVLDSVAFYRAVRGCLADAGIATINLFGDHPSFVRNMKHLNAAFDH
EEEEEEEEECCCCCCHHHHHHHHHHHHHHHHCCCEEEEEEECCCHHHHHHHHHHHHHHCC
RVIALPEVHDGNRIAIAFSGPALDVPFAQLDARAKLIEDTLKLPARKWVKALKATDGARD
EEEECCCCCCCCEEEEEECCCCCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCC
TAFAI
CEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 10761919 [H]