| Definition | Burkholderia cenocepacia HI2424 chromosome 1, complete sequence. |
|---|---|
| Accession | NC_008542 |
| Length | 3,483,902 |
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The map label for this gene is tal [H]
Identifier: 116690356
GI number: 116690356
Start: 2598180
End: 2599133
Strand: Direct
Name: tal [H]
Synonym: Bcen2424_2335
Alternate gene names: 116690356
Gene position: 2598180-2599133 (Clockwise)
Preceding gene: 116690355
Following gene: 116690357
Centisome position: 74.58
GC content: 63.63
Gene sequence:
>954_bases ATGACTACCGCACTCGACCAGCTGAAGCAGTACACGACCGTCGTCGCCGACACGGGCGACTTCCAGCAGCTTGCGCAATA CAAGCCGCAGGACGCGACCACGAACCCGTCGCTGATCCTGAAGGCCGTCCAGAAGGATGCGTACAAGCCGATCCTCGAGA AAACCGTCCGCGATCATCGCAACGAAAGCACCGATTTCATCATCGACCGCCTGCTGATCGCATTCGGCACCGAAATCCTG AAGCTGATCCCGGGCCGCGTATCGACCGAGGTCGACGCACGCCTGTCGTTCGACACGCAGCGCTCGATCGAGAAGGGCCG CGAGCTCATCAAGCTGTACGAAGCAGCCGGCATCGGCCGCGAGCGCATCCTGATCAAGCTCGCGTCGACGTGGGAAGGCA TCCGCGCGGCCGAGGTGCTGCAGAAGGAAGGGATCAAGTGCAACATGACCCTGCTTTTCTCGCTCGTGCAGGCCGCCGCG TGCGCGGAAGCGGGCGCGCAGCTGATCTCGCCGTTCGTCGGCCGCATCTACGACTGGTACAAGAAGCAGGCCGGCGCCGA ATGGAATGAAGCGCGCGACGGCGGCGCGAACGATCCGGGCGTGCAATCGGTGCGCCGCATCTACACGTACTACAAGACGT TCGGCTACAAGACCGAAGTGATGGGCGCGAGCTTCCGCACGACCAGCCAGATCACCGAGCTCGCCGGCTGCGACCTGCTG ACGATCAGTCCCGATTTGCTGCAGAAGCTGCAGGAGAGCAACGAGACGGTCGCCCGCAAGCTGTCCCCGGAAACGCTGCA GGACAAGCCGGCCGAGCGCGTCGCGATCGACGAGGCGTCGTTCCGCTTCCAGCTGAACGACGAAGCGATGGCCACCGAAA AGCTCGCCGAAGGCATCCGTGTGTTCGCCGCCGACGCGGTGAAACTCGAGAAGCTGATCGACGCGCTGCGCTGA
Upstream 100 bases:
>100_bases AATGATGGATTGGAAGCGGCGCCCGGCGCCGCTTCGCTTCGCCGCCGCGCTCGCGCGGCCCGTGAGAACCCGGCGCCCCG CGCTCTTCTTCCGAATCGCC
Downstream 100 bases:
>100_bases GCCGCACGACGCGTCAGCGGCTGTCAGCAAGACTGACAACAGCCGTCAGCAAGCGCTGCAAACGGTCGCGAACAGGATGT TCGCGGCCGTTTTTATTTTT
Product: transaldolase B
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 317; Mature: 316
Protein sequence:
>317_residues MTTALDQLKQYTTVVADTGDFQQLAQYKPQDATTNPSLILKAVQKDAYKPILEKTVRDHRNESTDFIIDRLLIAFGTEIL KLIPGRVSTEVDARLSFDTQRSIEKGRELIKLYEAAGIGRERILIKLASTWEGIRAAEVLQKEGIKCNMTLLFSLVQAAA CAEAGAQLISPFVGRIYDWYKKQAGAEWNEARDGGANDPGVQSVRRIYTYYKTFGYKTEVMGASFRTTSQITELAGCDLL TISPDLLQKLQESNETVARKLSPETLQDKPAERVAIDEASFRFQLNDEAMATEKLAEGIRVFAADAVKLEKLIDALR
Sequences:
>Translated_317_residues MTTALDQLKQYTTVVADTGDFQQLAQYKPQDATTNPSLILKAVQKDAYKPILEKTVRDHRNESTDFIIDRLLIAFGTEIL KLIPGRVSTEVDARLSFDTQRSIEKGRELIKLYEAAGIGRERILIKLASTWEGIRAAEVLQKEGIKCNMTLLFSLVQAAA CAEAGAQLISPFVGRIYDWYKKQAGAEWNEARDGGANDPGVQSVRRIYTYYKTFGYKTEVMGASFRTTSQITELAGCDLL TISPDLLQKLQESNETVARKLSPETLQDKPAERVAIDEASFRFQLNDEAMATEKLAEGIRVFAADAVKLEKLIDALR >Mature_316_residues TTALDQLKQYTTVVADTGDFQQLAQYKPQDATTNPSLILKAVQKDAYKPILEKTVRDHRNESTDFIIDRLLIAFGTEILK LIPGRVSTEVDARLSFDTQRSIEKGRELIKLYEAAGIGRERILIKLASTWEGIRAAEVLQKEGIKCNMTLLFSLVQAAAC AEAGAQLISPFVGRIYDWYKKQAGAEWNEARDGGANDPGVQSVRRIYTYYKTFGYKTEVMGASFRTTSQITELAGCDLLT ISPDLLQKLQESNETVARKLSPETLQDKPAERVAIDEASFRFQLNDEAMATEKLAEGIRVFAADAVKLEKLIDALR
Specific function: Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway [H]
COG id: COG0176
COG function: function code G; Transaldolase
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the transaldolase family. Type 1 subfamily [H]
Homologues:
Organism=Homo sapiens, GI5803187, Length=320, Percent_Identity=56.875, Blast_Score=350, Evalue=8e-97, Organism=Escherichia coli, GI1788807, Length=318, Percent_Identity=55.3459119496855, Blast_Score=340, Evalue=9e-95, Organism=Escherichia coli, GI1786189, Length=323, Percent_Identity=56.9659442724458, Blast_Score=338, Evalue=2e-94, Organism=Caenorhabditis elegans, GI25153750, Length=320, Percent_Identity=55.3125, Blast_Score=338, Evalue=3e-93, Organism=Caenorhabditis elegans, GI25153752, Length=167, Percent_Identity=55.688622754491, Blast_Score=177, Evalue=8e-45, Organism=Caenorhabditis elegans, GI17570473, Length=95, Percent_Identity=56.8421052631579, Blast_Score=98, Evalue=5e-21, Organism=Saccharomyces cerevisiae, GI6323386, Length=323, Percent_Identity=56.0371517027864, Blast_Score=325, Evalue=5e-90, Organism=Saccharomyces cerevisiae, GI6321480, Length=323, Percent_Identity=50.7739938080495, Blast_Score=322, Evalue=3e-89, Organism=Drosophila melanogaster, GI45549185, Length=318, Percent_Identity=56.6037735849057, Blast_Score=359, Evalue=2e-99,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR013785 - InterPro: IPR001585 - InterPro: IPR004730 - InterPro: IPR018225 [H]
Pfam domain/function: PF00923 Transaldolase [H]
EC number: =2.2.1.2 [H]
Molecular weight: Translated: 35380; Mature: 35249
Theoretical pI: Translated: 5.34; Mature: 5.34
Prosite motif: PS01054 TRANSALDOLASE_1 ; PS00958 TRANSALDOLASE_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTTALDQLKQYTTVVADTGDFQQLAQYKPQDATTNPSLILKAVQKDAYKPILEKTVRDHR CCHHHHHHHHHHHHHCCCCCHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHC NESTDFIIDRLLIAFGTEILKLIPGRVSTEVDARLSFDTQRSIEKGRELIKLYEAAGIGR CCCHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHCCCCHHHHHHHHHHHHHHHHHHCCCH ERILIKLASTWEGIRAAEVLQKEGIKCNMTLLFSLVQAAACAEAGAQLISPFVGRIYDWY HHHHEEEHHHHCHHHHHHHHHHCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH KKQAGAEWNEARDGGANDPGVQSVRRIYTYYKTFGYKTEVMGASFRTTSQITELAGCDLL HHHCCCCCHHHCCCCCCCHHHHHHHHHHHHHHHHCCHHHHCCCCHHHHHHHHHHHCCCEE TISPDLLQKLQESNETVARKLSPETLQDKPAERVAIDEASFRFQLNDEAMATEKLAEGIR EECHHHHHHHHHHHHHHHHHCCCHHHHCCCCHHEEECCCCEEEEECCHHHHHHHHHHHHH VFAADAVKLEKLIDALR HHHHHHHHHHHHHHHHC >Mature Secondary Structure TTALDQLKQYTTVVADTGDFQQLAQYKPQDATTNPSLILKAVQKDAYKPILEKTVRDHR CHHHHHHHHHHHHHCCCCCHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHC NESTDFIIDRLLIAFGTEILKLIPGRVSTEVDARLSFDTQRSIEKGRELIKLYEAAGIGR CCCHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHCCCCHHHHHHHHHHHHHHHHHHCCCH ERILIKLASTWEGIRAAEVLQKEGIKCNMTLLFSLVQAAACAEAGAQLISPFVGRIYDWY HHHHEEEHHHHCHHHHHHHHHHCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH KKQAGAEWNEARDGGANDPGVQSVRRIYTYYKTFGYKTEVMGASFRTTSQITELAGCDLL HHHCCCCCHHHCCCCCCCHHHHHHHHHHHHHHHHCCHHHHCCCCHHHHHHHHHHHCCCEE TISPDLLQKLQESNETVARKLSPETLQDKPAERVAIDEASFRFQLNDEAMATEKLAEGIR EECHHHHHHHHHHHHHHHHHCCCHHHHCCCCHHEEECCCCEEEEECCHHHHHHHHHHHHH VFAADAVKLEKLIDALR HHHHHHHHHHHHHHHHC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA