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The map label for this gene is ykgB [H]

Identifier: 116690343

GI number: 116690343

Start: 2584391

End: 2585638

Strand: Reverse

Name: ykgB [H]

Synonym: Bcen2424_2322

Alternate gene names: 116690343

Gene position: 2585638-2584391 (Counterclockwise)

Preceding gene: 116690346

Following gene: 116690340

Centisome position: 74.22

GC content: 67.39

Gene sequence:

>1248_bases
ATGCCCAACCGTTTACGCGAGCGTGACGCACGCGCTTCGACACGAGGGTTCCCGCTTAGGTTCGCTCACTGGATGAAAGG
TTTCGCGATCGTGCTTTCCCTGTCCGCGACCCACGCATTCGCGCAGCAATCGTCCGCCCCGGCCGACGGCGTCTACAACC
TGCTCGTCGGCACCTATACGGGCGGCGGCAGCGACGGGATTTACGTTTACCGCTTCGATACCAAGAGCGGCAGCGTCGCG
CCGGTGTCGTCGGCGAAGACCGTGAATCCGTCGTACCTGTTGCCGAGCCGCGACGGTCGCACCGTCTACGCGGTCAACGA
ACTGCCCGGCGACGACGGGCCGGCGACGCAGCGCGGCGGCGTGAGCGCGTTCCGCTTCGACGCGAAGACGGGCGCGCTGA
GCTTCATCGACCGCGTATCGTCGGAAGGGAACGATCCGTGCTATCTCGCGCTGTCGCCGGACGGCAAGTACCTCGTCACC
GCCAACTACTCGGTCGCGGCCGACCCGGGCGGCAGCTTCGCGGTGCTTCCGCTGCGCGACGACGGCGCGGTCGGTCAGGC
AGTGCTGACGGTCCACCACGAAGGCACCGGGCCGGTGAAGGGCCGCCAGGACGGCGCGCACGTGCATTCGACGGTGTTTT
CGCCGGACGGCCGCTATCTGTTCGTGCAGGATCTCGGCGCGGACAAGATCTACGGCTACCGCTACACGGTGGACGGCAGC
CGCGGGCTGATCAGCCCGACCGACACGCGCTACACGCCGGTGAAGGCGGGCTCGGGCCCGCGTCACATGGTGTTCAGCGC
CGACGGCCGGTTCGCGTACGTGACGAGCGAACTCAACGCGTCGGTCGAGGTGTTCGGCTATCACGACGGCAAGCTGACGC
CGATCGAGACGCTGCCGATGACGGCGCCCGGCTTCAAGGGCAAGGTCGGCGGCGGCGCGATCCACCTGTCGCCGGACGGC
CGCTTCCTGTACGCGAGCAACCGCGGCGACGCGAACGACCTCGTGATCTACGCGGTGAACAAGGCCGACGGCCGGCTGAA
GCACGTCGGCCGCCAGTCGAGCCTCGGCAAGACGCCGCGCGAGTTCCTGATCGATCCGACCGGCAAGTGGCTGATCGTCG
GCAACCAGGACAGCGACACGTTCTACGTGTTCAGTCGCGATGTCGAAACGGGGCAGCTCGGCGCGAATCCGCAGAAGATC
GCGGTCGGCAAGCCGGTCGATTTCAAGCTGGTGCCGGTCGCCCAGTAA

Upstream 100 bases:

>100_bases
GCGCCGCGCCCCGTATACTCGGCCGGGCGGCGGAGCGCGTGAACGGCCGGCGTTTCGTCCTATCTCAACACTTGAAGCGA
CTCGATGCAAGGAGGATTCA

Downstream 100 bases:

>100_bases
ATCGCGGGGATTCCCGGCTGATGCAAGAAGGGCGCTGCCGATGCAGCGCCCTTCGTATTTCAGGCAGTCGGTTTCACGAC
GCGCCCATGTCGATGAACGG

Product: 3-carboxymuconate cyclase-like protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 415; Mature: 414

Protein sequence:

>415_residues
MPNRLRERDARASTRGFPLRFAHWMKGFAIVLSLSATHAFAQQSSAPADGVYNLLVGTYTGGGSDGIYVYRFDTKSGSVA
PVSSAKTVNPSYLLPSRDGRTVYAVNELPGDDGPATQRGGVSAFRFDAKTGALSFIDRVSSEGNDPCYLALSPDGKYLVT
ANYSVAADPGGSFAVLPLRDDGAVGQAVLTVHHEGTGPVKGRQDGAHVHSTVFSPDGRYLFVQDLGADKIYGYRYTVDGS
RGLISPTDTRYTPVKAGSGPRHMVFSADGRFAYVTSELNASVEVFGYHDGKLTPIETLPMTAPGFKGKVGGGAIHLSPDG
RFLYASNRGDANDLVIYAVNKADGRLKHVGRQSSLGKTPREFLIDPTGKWLIVGNQDSDTFYVFSRDVETGQLGANPQKI
AVGKPVDFKLVPVAQ

Sequences:

>Translated_415_residues
MPNRLRERDARASTRGFPLRFAHWMKGFAIVLSLSATHAFAQQSSAPADGVYNLLVGTYTGGGSDGIYVYRFDTKSGSVA
PVSSAKTVNPSYLLPSRDGRTVYAVNELPGDDGPATQRGGVSAFRFDAKTGALSFIDRVSSEGNDPCYLALSPDGKYLVT
ANYSVAADPGGSFAVLPLRDDGAVGQAVLTVHHEGTGPVKGRQDGAHVHSTVFSPDGRYLFVQDLGADKIYGYRYTVDGS
RGLISPTDTRYTPVKAGSGPRHMVFSADGRFAYVTSELNASVEVFGYHDGKLTPIETLPMTAPGFKGKVGGGAIHLSPDG
RFLYASNRGDANDLVIYAVNKADGRLKHVGRQSSLGKTPREFLIDPTGKWLIVGNQDSDTFYVFSRDVETGQLGANPQKI
AVGKPVDFKLVPVAQ
>Mature_414_residues
PNRLRERDARASTRGFPLRFAHWMKGFAIVLSLSATHAFAQQSSAPADGVYNLLVGTYTGGGSDGIYVYRFDTKSGSVAP
VSSAKTVNPSYLLPSRDGRTVYAVNELPGDDGPATQRGGVSAFRFDAKTGALSFIDRVSSEGNDPCYLALSPDGKYLVTA
NYSVAADPGGSFAVLPLRDDGAVGQAVLTVHHEGTGPVKGRQDGAHVHSTVFSPDGRYLFVQDLGADKIYGYRYTVDGSR
GLISPTDTRYTPVKAGSGPRHMVFSADGRFAYVTSELNASVEVFGYHDGKLTPIETLPMTAPGFKGKVGGGAIHLSPDGR
FLYASNRGDANDLVIYAVNKADGRLKHVGRQSSLGKTPREFLIDPTGKWLIVGNQDSDTFYVFSRDVETGQLGANPQKIA
VGKPVDFKLVPVAQ

Specific function: Unknown

COG id: COG2706

COG function: function code G; 3-carboxymuconate cyclase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the cycloisomerase 2 family [H]

Homologues:

Organism=Escherichia coli, GI1786983, Length=275, Percent_Identity=32.7272727272727, Blast_Score=110, Evalue=1e-25,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011048
- InterPro:   IPR019405
- InterPro:   IPR015943 [H]

Pfam domain/function: PF10282 DUF2394 [H]

EC number: NA

Molecular weight: Translated: 44310; Mature: 44179

Theoretical pI: Translated: 9.17; Mature: 9.17

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
1.0 %Met     (Translated Protein)
1.2 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
0.7 %Met     (Mature Protein)
1.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPNRLRERDARASTRGFPLRFAHWMKGFAIVLSLSATHAFAQQSSAPADGVYNLLVGTYT
CCCHHHHHHCCCCCCCCCCHHHHHHCCEEEEEEECHHHHHHHCCCCCCCCEEEEEEEEEC
GGGSDGIYVYRFDTKSGSVAPVSSAKTVNPSYLLPSRDGRTVYAVNELPGDDGPATQRGG
CCCCCCEEEEEEECCCCCCCCCCCCCCCCCCEEECCCCCCEEEEEECCCCCCCCCCCCCC
VSAFRFDAKTGALSFIDRVSSEGNDPCYLALSPDGKYLVTANYSVAADPGGSFAVLPLRD
CEEEEEECCCCHHHHHHHHHCCCCCCEEEEECCCCCEEEEECCEEEECCCCCEEEEEECC
DGAVGQAVLTVHHEGTGPVKGRQDGAHVHSTVFSPDGRYLFVQDLGADKIYGYRYTVDGS
CCCCCEEEEEEEECCCCCCCCCCCCCEEEEEEECCCCCEEEEEECCCCEEEEEEEEECCC
RGLISPTDTRYTPVKAGSGPRHMVFSADGRFAYVTSELNASVEVFGYHDGKLTPIETLPM
CCCCCCCCCEEEEEECCCCCCEEEEECCCCEEEEEECCCCEEEEEEECCCCCCEEEECCC
TAPGFKGKVGGGAIHLSPDGRFLYASNRGDANDLVIYAVNKADGRLKHVGRQSSLGKTPR
CCCCCCCCCCCCEEEECCCCCEEEECCCCCCCCEEEEEEECCCCHHHHCCCCCCCCCCCH
EFLIDPTGKWLIVGNQDSDTFYVFSRDVETGQLGANPQKIAVGKPVDFKLVPVAQ
HEEECCCCCEEEEECCCCCEEEEEECCCCCCCCCCCCCEEEECCCCCEEEEEECC
>Mature Secondary Structure 
PNRLRERDARASTRGFPLRFAHWMKGFAIVLSLSATHAFAQQSSAPADGVYNLLVGTYT
CCHHHHHHCCCCCCCCCCHHHHHHCCEEEEEEECHHHHHHHCCCCCCCCEEEEEEEEEC
GGGSDGIYVYRFDTKSGSVAPVSSAKTVNPSYLLPSRDGRTVYAVNELPGDDGPATQRGG
CCCCCCEEEEEEECCCCCCCCCCCCCCCCCCEEECCCCCCEEEEEECCCCCCCCCCCCCC
VSAFRFDAKTGALSFIDRVSSEGNDPCYLALSPDGKYLVTANYSVAADPGGSFAVLPLRD
CEEEEEECCCCHHHHHHHHHCCCCCCEEEEECCCCCEEEEECCEEEECCCCCEEEEEECC
DGAVGQAVLTVHHEGTGPVKGRQDGAHVHSTVFSPDGRYLFVQDLGADKIYGYRYTVDGS
CCCCCEEEEEEEECCCCCCCCCCCCCEEEEEEECCCCCEEEEEECCCCEEEEEEEEECCC
RGLISPTDTRYTPVKAGSGPRHMVFSADGRFAYVTSELNASVEVFGYHDGKLTPIETLPM
CCCCCCCCCEEEEEECCCCCCEEEEECCCCEEEEEECCCCEEEEEEECCCCCCEEEECCC
TAPGFKGKVGGGAIHLSPDGRFLYASNRGDANDLVIYAVNKADGRLKHVGRQSSLGKTPR
CCCCCCCCCCCCEEEECCCCCEEEECCCCCCCCEEEEEEECCCCHHHHCCCCCCCCCCCH
EFLIDPTGKWLIVGNQDSDTFYVFSRDVETGQLGANPQKIAVGKPVDFKLVPVAQ
HEEECCCCCEEEEECCCCCEEEEEECCCCCCCCCCCCCEEEECCCCCEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]