| Definition | Burkholderia cenocepacia HI2424 chromosome 1, complete sequence. |
|---|---|
| Accession | NC_008542 |
| Length | 3,483,902 |
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The map label for this gene is mgsA [H]
Identifier: 116690312
GI number: 116690312
Start: 2547571
End: 2547963
Strand: Reverse
Name: mgsA [H]
Synonym: Bcen2424_2291
Alternate gene names: 116690312
Gene position: 2547963-2547571 (Counterclockwise)
Preceding gene: 116690313
Following gene: 116690311
Centisome position: 73.14
GC content: 70.74
Gene sequence:
>393_bases ATGAGCAAACCCCGCATCGCACTGATTGCGCACGACGCGAAGAAGGACGAGATCGTCGCGCTCGCGGGCCAGTATCGCGA GACGCTCGCGCAATGCCGGCTGGTCGCGACCGGCACGACGGGCGGCCGTATCGCCGCCGCGCACGGGCTCGAGGTCGAGC GCAAGCTGTCGGGGCCGCTCGGCGGCGACCTGCAGATCGGCGCGGAGCTCGCCGACGGCCGCGTCGACATCGTCGTGTTC CTGCGCGACCCGATGACCGCGCAGCCGCACGACCCCGACATCACGGCGCTGGTGCGCGCATGCGACGTGCACGACGTGCC GGTCGCGACCAACGTCGCGACCGCGCGGATGCTGCTCGACGATCTGGCGCGCAACATGCAGGACGTTTGCTAG
Upstream 100 bases:
>100_bases GGGCAGAACTGGCTGCTCGACGGCGGCGCGTATCCGGGTACGTTCTGACCCGCGCTTTTCGCTTCACGACGACAACAACC GAACGACGAAGGAACTGGAG
Downstream 100 bases:
>100_bases GCGCGGGCATCGGCTGATTGTCCCTGCCGGCGGCAGGGCCATGCACGAACGGTGGCGACGCGCGAGAATCGTGCGTCGCC ACGCGCGCCTGCCGGCACCC
Product: methylglyoxal synthase
Products: NA
Alternate protein names: MGS [H]
Number of amino acids: Translated: 130; Mature: 129
Protein sequence:
>130_residues MSKPRIALIAHDAKKDEIVALAGQYRETLAQCRLVATGTTGGRIAAAHGLEVERKLSGPLGGDLQIGAELADGRVDIVVF LRDPMTAQPHDPDITALVRACDVHDVPVATNVATARMLLDDLARNMQDVC
Sequences:
>Translated_130_residues MSKPRIALIAHDAKKDEIVALAGQYRETLAQCRLVATGTTGGRIAAAHGLEVERKLSGPLGGDLQIGAELADGRVDIVVF LRDPMTAQPHDPDITALVRACDVHDVPVATNVATARMLLDDLARNMQDVC >Mature_129_residues SKPRIALIAHDAKKDEIVALAGQYRETLAQCRLVATGTTGGRIAAAHGLEVERKLSGPLGGDLQIGAELADGRVDIVVFL RDPMTAQPHDPDITALVRACDVHDVPVATNVATARMLLDDLARNMQDVC
Specific function: Unknown
COG id: COG1803
COG function: function code G; Methylglyoxal synthase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the methylglyoxal synthase family [H]
Homologues:
Organism=Escherichia coli, GI87081809, Length=118, Percent_Identity=45.7627118644068, Blast_Score=117, Evalue=2e-28,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004363 - InterPro: IPR018148 - InterPro: IPR011607 [H]
Pfam domain/function: PF02142 MGS [H]
EC number: =4.2.3.3 [H]
Molecular weight: Translated: 13849; Mature: 13718
Theoretical pI: Translated: 5.58; Mature: 5.58
Prosite motif: PS01335 METHYLGLYOXAL_SYNTH
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.3 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 5.4 %Cys+Met (Translated Protein) 2.3 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 4.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSKPRIALIAHDAKKDEIVALAGQYRETLAQCRLVATGTTGGRIAAAHGLEVERKLSGPL CCCCEEEEEECCCCCCCEEEHHHHHHHHHHHEEEEEECCCCCEEEEECCCCCHHHHCCCC GGDLQIGAELADGRVDIVVFLRDPMTAQPHDPDITALVRACDVHDVPVATNVATARMLLD CCCEEECCEECCCEEEEEEEEECCCCCCCCCCCHHHHHHHCCCCCCCCCCHHHHHHHHHH DLARNMQDVC HHHHHHHHCC >Mature Secondary Structure SKPRIALIAHDAKKDEIVALAGQYRETLAQCRLVATGTTGGRIAAAHGLEVERKLSGPL CCCEEEEEECCCCCCCEEEHHHHHHHHHHHEEEEEECCCCCEEEEECCCCCHHHHCCCC GGDLQIGAELADGRVDIVVFLRDPMTAQPHDPDITALVRACDVHDVPVATNVATARMLLD CCCEEECCEECCCEEEEEEEEECCCCCCCCCCCHHHHHHHCCCCCCCCCCHHHHHHHHHH DLARNMQDVC HHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA