| Definition | Burkholderia cenocepacia HI2424 chromosome 1, complete sequence. |
|---|---|
| Accession | NC_008542 |
| Length | 3,483,902 |
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The map label for this gene is qor [H]
Identifier: 116690311
GI number: 116690311
Start: 2546424
End: 2547398
Strand: Reverse
Name: qor [H]
Synonym: Bcen2424_2290
Alternate gene names: 116690311
Gene position: 2547398-2546424 (Counterclockwise)
Preceding gene: 116690312
Following gene: 116690310
Centisome position: 73.12
GC content: 68.1
Gene sequence:
>975_bases ATGCCGAAAGCAATCCGATACGACCAGCCGGGCGGCCCGGACGTGATGAAGTGGGTCGATGTCGAGGTCGGCGCGCCGAA GGCGGGCGAAGTCCGCATCCGGCAACACGCGGTCGGGCTCAACTACATCGACGTGTATTTCCGCACGGGCCTGTATCCGC AACAGCTGCCGGCCGGCCTCGGGATGGAGGCGGCGGGCGAGGTGACGGCCGTCGGCGACGGCGTGACCGCGTTCAAGGCC GGCGACCGTGTCGCCTACGTCGGCCAGCCGCCCGGCGCGTATGCGCAGGAGCGCGTGATGCCGGCCGAGCGTGTCGTGAA GCTGCCGGACGGCATCAGCTACGACGACGCGGCATCGGTGATGCTGCAGGGCCTGACCGCGCACTATCTGCTGCGCCGCA CCTACCCGGTGAAGGCCGGCGACACGATCCTGATCCACGCGGCGGCCGGCGGCGTGGGCTTGCTCGTGTGCCAGTGGGCG AAGGCGCTCGGCGCGACCGTGATCGGTACGGTCGGCTCCGACGAGAAGGCCGAGCTCGCGAAGGCGCACGGCTGCGATCA TCCGATCGTCTACACGCGCGAGAACTTCACGCAGCGCGTGAAGGCAATCACGAACGGCGCGGGCGTGCCGGTCGTCTACG ATTCGATCGGCAAGGACACCTACGTCGGTTCGCTCGACAGCCTCGCGCCGCTCGGCTACTTCGTCAGCTTCGGCAATGCG TCGGGGCCGCTGCCGCCGATCGACTCGAAGGAATTCTCGTCGCGCGGCTCGCTGTTCTTCACGCGACCGACGCTGTTCTC GTACATCGCGAAGCGCGCCGATCTCGAGGCCGCGGCCGCCGAGCTGTTCGACGTGATCCTGTCGGGCAAGGTGAAGACGA GCATCAACCAGCGCTATCCGCTCGCCGAAGTCGGCCGCGCGCATGCCGATCTGGAAGCACGCAAGACCACCGGCTCGACG ATCCTGGTTCCCTGA
Upstream 100 bases:
>100_bases GCGTCGCCACGCGCGCCTGCCGGCACCCGCACGAATCGGTGCGGCGCGCGCATCGGCGCCCCGGATTTCCCTGACTGACA GACAGAAGAGGAGCAAAACG
Downstream 100 bases:
>100_bases CGCATCCTTTCGTGCCGGCGTTACGCCGGCACATCCCGGGCGGCGCCGGCGGGCCGCCCGTCCTGCCTCCTGTCTCCCGG CCTGTCCGACGTCCCGACCA
Product: alcohol dehydrogenase
Products: NA
Alternate protein names: NADPH:quinone reductase [H]
Number of amino acids: Translated: 324; Mature: 323
Protein sequence:
>324_residues MPKAIRYDQPGGPDVMKWVDVEVGAPKAGEVRIRQHAVGLNYIDVYFRTGLYPQQLPAGLGMEAAGEVTAVGDGVTAFKA GDRVAYVGQPPGAYAQERVMPAERVVKLPDGISYDDAASVMLQGLTAHYLLRRTYPVKAGDTILIHAAAGGVGLLVCQWA KALGATVIGTVGSDEKAELAKAHGCDHPIVYTRENFTQRVKAITNGAGVPVVYDSIGKDTYVGSLDSLAPLGYFVSFGNA SGPLPPIDSKEFSSRGSLFFTRPTLFSYIAKRADLEAAAAELFDVILSGKVKTSINQRYPLAEVGRAHADLEARKTTGST ILVP
Sequences:
>Translated_324_residues MPKAIRYDQPGGPDVMKWVDVEVGAPKAGEVRIRQHAVGLNYIDVYFRTGLYPQQLPAGLGMEAAGEVTAVGDGVTAFKA GDRVAYVGQPPGAYAQERVMPAERVVKLPDGISYDDAASVMLQGLTAHYLLRRTYPVKAGDTILIHAAAGGVGLLVCQWA KALGATVIGTVGSDEKAELAKAHGCDHPIVYTRENFTQRVKAITNGAGVPVVYDSIGKDTYVGSLDSLAPLGYFVSFGNA SGPLPPIDSKEFSSRGSLFFTRPTLFSYIAKRADLEAAAAELFDVILSGKVKTSINQRYPLAEVGRAHADLEARKTTGST ILVP >Mature_323_residues PKAIRYDQPGGPDVMKWVDVEVGAPKAGEVRIRQHAVGLNYIDVYFRTGLYPQQLPAGLGMEAAGEVTAVGDGVTAFKAG DRVAYVGQPPGAYAQERVMPAERVVKLPDGISYDDAASVMLQGLTAHYLLRRTYPVKAGDTILIHAAAGGVGLLVCQWAK ALGATVIGTVGSDEKAELAKAHGCDHPIVYTRENFTQRVKAITNGAGVPVVYDSIGKDTYVGSLDSLAPLGYFVSFGNAS GPLPPIDSKEFSSRGSLFFTRPTLFSYIAKRADLEAAAAELFDVILSGKVKTSINQRYPLAEVGRAHADLEARKTTGSTI LVP
Specific function: Unknown
COG id: COG0604
COG function: function code CR; NADPH:quinone reductase and related Zn-dependent oxidoreductases
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the zinc-containing alcohol dehydrogenase family. Quinone oxidoreductase subfamily [H]
Homologues:
Organism=Homo sapiens, GI194239674, Length=331, Percent_Identity=32.02416918429, Blast_Score=148, Evalue=7e-36, Organism=Homo sapiens, GI13236495, Length=331, Percent_Identity=32.02416918429, Blast_Score=148, Evalue=7e-36, Organism=Homo sapiens, GI194239676, Length=328, Percent_Identity=30.7926829268293, Blast_Score=134, Evalue=1e-31, Organism=Homo sapiens, GI22538446, Length=330, Percent_Identity=31.2121212121212, Blast_Score=132, Evalue=3e-31, Organism=Homo sapiens, GI22538444, Length=330, Percent_Identity=31.2121212121212, Blast_Score=132, Evalue=3e-31, Organism=Homo sapiens, GI18379349, Length=313, Percent_Identity=29.7124600638978, Blast_Score=131, Evalue=7e-31, Organism=Homo sapiens, GI24308257, Length=338, Percent_Identity=28.9940828402367, Blast_Score=109, Evalue=3e-24, Organism=Homo sapiens, GI28557745, Length=292, Percent_Identity=30.4794520547945, Blast_Score=107, Evalue=2e-23, Organism=Homo sapiens, GI67078404, Length=245, Percent_Identity=28.1632653061224, Blast_Score=77, Evalue=2e-14, Organism=Homo sapiens, GI197927207, Length=198, Percent_Identity=29.7979797979798, Blast_Score=74, Evalue=1e-13, Organism=Homo sapiens, GI41872631, Length=212, Percent_Identity=30.188679245283, Blast_Score=65, Evalue=8e-11, Organism=Homo sapiens, GI67078406, Length=195, Percent_Identity=29.2307692307692, Blast_Score=65, Evalue=9e-11, Organism=Escherichia coli, GI1790485, Length=327, Percent_Identity=46.7889908256881, Blast_Score=298, Evalue=5e-82, Organism=Escherichia coli, GI87082125, Length=349, Percent_Identity=26.0744985673352, Blast_Score=68, Evalue=9e-13, Organism=Escherichia coli, GI87081918, Length=324, Percent_Identity=25.9259259259259, Blast_Score=62, Evalue=4e-11, Organism=Caenorhabditis elegans, GI17507255, Length=318, Percent_Identity=26.7295597484277, Blast_Score=105, Evalue=5e-23, Organism=Caenorhabditis elegans, GI17556000, Length=209, Percent_Identity=32.5358851674641, Blast_Score=75, Evalue=5e-14, Organism=Caenorhabditis elegans, GI17536829, Length=242, Percent_Identity=28.099173553719, Blast_Score=65, Evalue=6e-11, Organism=Saccharomyces cerevisiae, GI6319520, Length=324, Percent_Identity=40.7407407407407, Blast_Score=224, Evalue=1e-59, Organism=Saccharomyces cerevisiae, GI6323729, Length=351, Percent_Identity=25.3561253561254, Blast_Score=73, Evalue=6e-14, Organism=Saccharomyces cerevisiae, GI6319955, Length=230, Percent_Identity=28.2608695652174, Blast_Score=64, Evalue=4e-11, Organism=Saccharomyces cerevisiae, GI6322619, Length=230, Percent_Identity=28.2608695652174, Blast_Score=64, Evalue=5e-11, Organism=Drosophila melanogaster, GI45550423, Length=313, Percent_Identity=24.9201277955272, Blast_Score=73, Evalue=2e-13,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR013149 - InterPro: IPR013154 - InterPro: IPR002085 - InterPro: IPR011032 - InterPro: IPR016040 - InterPro: IPR002364 [H]
Pfam domain/function: PF08240 ADH_N; PF00107 ADH_zinc_N [H]
EC number: =1.6.5.5 [H]
Molecular weight: Translated: 34426; Mature: 34294
Theoretical pI: Translated: 7.64; Mature: 7.64
Prosite motif: PS01162 QOR_ZETA_CRYSTAL
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPKAIRYDQPGGPDVMKWVDVEVGAPKAGEVRIRQHAVGLNYIDVYFRTGLYPQQLPAGL CCCCCCCCCCCCCCCEEEEEEECCCCCCCCEEEEEHHCCCCEEEEEHHCCCCHHHCCCCC GMEAAGEVTAVGDGVTAFKAGDRVAYVGQPPGAYAQERVMPAERVVKLPDGISYDDAASV CCCCCCCEEEECCCEEEEECCCEEEEECCCCCCHHHHHCCCHHHHEECCCCCCCHHHHHH MLQGLTAHYLLRRTYPVKAGDTILIHAAAGGVGLLVCQWAKALGATVIGTVGSDEKAELA HHHHHHHHHHHHHCCCCCCCCEEEEEECCCCHHHHHHHHHHHHCCEEEEECCCCHHHHHH KAHGCDHPIVYTRENFTQRVKAITNGAGVPVVYDSIGKDTYVGSLDSLAPLGYFVSFGNA HHCCCCCCEEEECHHHHHHHHHHHCCCCCCEEEECCCCCCCCCCHHHHHHHHHHEEECCC SGPLPPIDSKEFSSRGSLFFTRPTLFSYIAKRADLEAAAAELFDVILSGKVKTSINQRYP CCCCCCCCCHHHCCCCCEEEECHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHCCCCCCC LAEVGRAHADLEARKTTGSTILVP HHHHHHHHCCCHHHCCCCCEEECC >Mature Secondary Structure PKAIRYDQPGGPDVMKWVDVEVGAPKAGEVRIRQHAVGLNYIDVYFRTGLYPQQLPAGL CCCCCCCCCCCCCCEEEEEEECCCCCCCCEEEEEHHCCCCEEEEEHHCCCCHHHCCCCC GMEAAGEVTAVGDGVTAFKAGDRVAYVGQPPGAYAQERVMPAERVVKLPDGISYDDAASV CCCCCCCEEEECCCEEEEECCCEEEEECCCCCCHHHHHCCCHHHHEECCCCCCCHHHHHH MLQGLTAHYLLRRTYPVKAGDTILIHAAAGGVGLLVCQWAKALGATVIGTVGSDEKAELA HHHHHHHHHHHHHCCCCCCCCEEEEEECCCCHHHHHHHHHHHHCCEEEEECCCCHHHHHH KAHGCDHPIVYTRENFTQRVKAITNGAGVPVVYDSIGKDTYVGSLDSLAPLGYFVSFGNA HHCCCCCCEEEECHHHHHHHHHHHCCCCCCEEEECCCCCCCCCCHHHHHHHHHHEEECCC SGPLPPIDSKEFSSRGSLFFTRPTLFSYIAKRADLEAAAAELFDVILSGKVKTSINQRYP CCCCCCCCCHHHCCCCCEEEECHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHCCCCCCC LAEVGRAHADLEARKTTGSTILVP HHHHHHHHCCCHHHCCCCCEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 10984043 [H]