Definition Burkholderia cenocepacia HI2424 chromosome 1, complete sequence.
Accession NC_008542
Length 3,483,902

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The map label for this gene is 116690295

Identifier: 116690295

GI number: 116690295

Start: 2527856

End: 2528437

Strand: Direct

Name: 116690295

Synonym: Bcen2424_2274

Alternate gene names: NA

Gene position: 2527856-2528437 (Clockwise)

Preceding gene: 116690294

Following gene: 116690296

Centisome position: 72.56

GC content: 67.7

Gene sequence:

>582_bases
ATGAAGGCAGTCTGCGTTTACTGCGGCTCGTCGTCCGGCGTGCGGCCCGTCTATGCCGACGCCGCGCGCGCGTTCGGCCG
TGCACTCGTCGATGCGGGCCTCACGCTCGTGTACGGCGGCGGCCGCGTCGGCCTGATGGGCGTGATCGCCGACGAAGTGA
TGGCGGCCGGCGGCCGTGCGGTCGGCGTGATCCCCGAGCTGCTCGTCGACAAGGAAGTCGGCCATACGGGGCTGTCGGAA
CTGCACGTCGTGCCCGACATGCACCATCGCAAGAAAATGATGGCCGACCTCTCCGACGCGTTCGTCGCGATGCCCGGCGG
CGCCGGCACGCTCGAGGAGCTCTTCGAGGTCTACACGTGGGCGCAGCTCGGCTATCACCGCAAGCCCGTCGCGCTCTACA
ACATCGATTCGTTCTACGATCCGCTGATCGCGCTGCTGCGCCATACGGTCGACGAAGGCTTCATGCGACCTGCCTATTTC
GACGCGCTGTGCGTCGAATCGGAACCCGTCGCGCTGATCGAGCGGCTGCGCCACTACCAGCCGCCCGCCCGCGACAAGTG
GGCGCCCGACGCAGCGAAGTGA

Upstream 100 bases:

>100_bases
AGCGCCAGTTCACCGACTACCTGCCGCCGCGCGACGGCTCCCCGCGCCCCGCCGACAGCCCCGTCGTCACCGGGCAGGCG
TCCGCCAAGGATTCCAAGCA

Downstream 100 bases:

>100_bases
TCCTCACCGGAAACCGCACGCGATGACCGCACCGTCCGACCGCAAGGTAGTCCTCATCACCGGCGCGAGCCGCGGCATCG
GCCGCGCGACCGCCGTGCTC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 193; Mature: 193

Protein sequence:

>193_residues
MKAVCVYCGSSSGVRPVYADAARAFGRALVDAGLTLVYGGGRVGLMGVIADEVMAAGGRAVGVIPELLVDKEVGHTGLSE
LHVVPDMHHRKKMMADLSDAFVAMPGGAGTLEELFEVYTWAQLGYHRKPVALYNIDSFYDPLIALLRHTVDEGFMRPAYF
DALCVESEPVALIERLRHYQPPARDKWAPDAAK

Sequences:

>Translated_193_residues
MKAVCVYCGSSSGVRPVYADAARAFGRALVDAGLTLVYGGGRVGLMGVIADEVMAAGGRAVGVIPELLVDKEVGHTGLSE
LHVVPDMHHRKKMMADLSDAFVAMPGGAGTLEELFEVYTWAQLGYHRKPVALYNIDSFYDPLIALLRHTVDEGFMRPAYF
DALCVESEPVALIERLRHYQPPARDKWAPDAAK
>Mature_193_residues
MKAVCVYCGSSSGVRPVYADAARAFGRALVDAGLTLVYGGGRVGLMGVIADEVMAAGGRAVGVIPELLVDKEVGHTGLSE
LHVVPDMHHRKKMMADLSDAFVAMPGGAGTLEELFEVYTWAQLGYHRKPVALYNIDSFYDPLIALLRHTVDEGFMRPAYF
DALCVESEPVALIERLRHYQPPARDKWAPDAAK

Specific function: Unknown

COG id: COG1611

COG function: function code R; Predicted Rossmann fold nucleotide-binding protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the LOG family [H]

Homologues:

Organism=Saccharomyces cerevisiae, GI6322406, Length=207, Percent_Identity=42.9951690821256, Blast_Score=170, Evalue=1e-43,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005269 [H]

Pfam domain/function: PF03641 Lysine_decarbox [H]

EC number: NA

Molecular weight: Translated: 20961; Mature: 20961

Theoretical pI: Translated: 6.15; Mature: 6.15

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
4.1 %Met     (Translated Protein)
5.7 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
4.1 %Met     (Mature Protein)
5.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKAVCVYCGSSSGVRPVYADAARAFGRALVDAGLTLVYGGGRVGLMGVIADEVMAAGGRA
CCEEEEEECCCCCCCHHHHHHHHHHHHHHHHCCEEEEECCCCHHHHHHHHHHHHHCCCCE
VGVIPELLVDKEVGHTGLSELHVVPDMHHRKKMMADLSDAFVAMPGGAGTLEELFEVYTW
EHHHHHHHHHHHCCCCCCHHEECCCCHHHHHHHHHHHHHHEEECCCCCCHHHHHHHHHHH
AQLGYHRKPVALYNIDSFYDPLIALLRHTVDEGFMRPAYFDALCVESEPVALIERLRHYQ
HHHCCCCCCEEEEECHHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCCCCHHHHHHHHHCC
PPARDKWAPDAAK
CCCCCCCCCCCCC
>Mature Secondary Structure
MKAVCVYCGSSSGVRPVYADAARAFGRALVDAGLTLVYGGGRVGLMGVIADEVMAAGGRA
CCEEEEEECCCCCCCHHHHHHHHHHHHHHHHCCEEEEECCCCHHHHHHHHHHHHHCCCCE
VGVIPELLVDKEVGHTGLSELHVVPDMHHRKKMMADLSDAFVAMPGGAGTLEELFEVYTW
EHHHHHHHHHHHCCCCCCHHEECCCCHHHHHHHHHHHHHHEEECCCCCCHHHHHHHHHHH
AQLGYHRKPVALYNIDSFYDPLIALLRHTVDEGFMRPAYFDALCVESEPVALIERLRHYQ
HHHCCCCCCEEEEECHHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCCCCHHHHHHHHHCC
PPARDKWAPDAAK
CCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 10984043; 2116366 [H]