| Definition | Burkholderia cenocepacia HI2424 chromosome 1, complete sequence. |
|---|---|
| Accession | NC_008542 |
| Length | 3,483,902 |
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The map label for this gene is 116690256
Identifier: 116690256
GI number: 116690256
Start: 2488956
End: 2489252
Strand: Reverse
Name: 116690256
Synonym: Bcen2424_2235
Alternate gene names: NA
Gene position: 2489252-2488956 (Counterclockwise)
Preceding gene: 116690257
Following gene: 116690255
Centisome position: 71.45
GC content: 62.63
Gene sequence:
>297_bases ATGTCGGCAGCCGGCTGGTTCATCGTGCTGTTGGCGCTCGTCTGCGCCAACCTGCCGTTCCTGAACCAACGCCTCTTCGC CGTCGTGCCGTTCGGCGCGACCAAGAAGAACGCGTGGGTGCGGATCGGCGAGCTGATCGTGCTGTACTTCGTCGTCGGCG CGCTCGGCTTCTGGCTCGAGTCGCGCGCCGGCAACCGCTTCGAACAGGGCTGGCAGTTTTACGCGATCACGTTCAGTCTC TTCGTCGTGTTCGCGTTTCCCGGCTTCACGTTCCAGTATCTCGTCAAACGACGCTGA
Upstream 100 bases:
>100_bases TCCTCGTGCTGAACGGCCTGGCGGTCGTCGTGCTCGGCCTGATCCCGAGCCCGCTGCTGACTGCCTGCCTGCAGGCAATC CGTCACACGCTGCCGCTGTA
Downstream 100 bases:
>100_bases CGGCTTCGGCCGTCCGTCGTGCTCATTCAGGAGCCGCCGATGGCCGAACTACCCAATCACGACGCCGCACTGACCGAAAC CTGCCTCGAGAGCGAGGCGA
Product: hypothetical protein
Products: NA
Alternate protein names: Transmembrane Lipoprotein
Number of amino acids: Translated: 98; Mature: 97
Protein sequence:
>98_residues MSAAGWFIVLLALVCANLPFLNQRLFAVVPFGATKKNAWVRIGELIVLYFVVGALGFWLESRAGNRFEQGWQFYAITFSL FVVFAFPGFTFQYLVKRR
Sequences:
>Translated_98_residues MSAAGWFIVLLALVCANLPFLNQRLFAVVPFGATKKNAWVRIGELIVLYFVVGALGFWLESRAGNRFEQGWQFYAITFSL FVVFAFPGFTFQYLVKRR >Mature_97_residues SAAGWFIVLLALVCANLPFLNQRLFAVVPFGATKKNAWVRIGELIVLYFVVGALGFWLESRAGNRFEQGWQFYAITFSLF VVFAFPGFTFQYLVKRR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 11220; Mature: 11089
Theoretical pI: Translated: 10.76; Mature: 10.76
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 1.0 %Met (Translated Protein) 2.0 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 1.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSAAGWFIVLLALVCANLPFLNQRLFAVVPFGATKKNAWVRIGELIVLYFVVGALGFWLE CCCCHHHHHHHHHHHCCCCCCCCCEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH SRAGNRFEQGWQFYAITFSLFVVFAFPGFTFQYLVKRR HCCCCCHHHCHHHHHHHHHHHHHHHCCCHHHHHHHHCC >Mature Secondary Structure SAAGWFIVLLALVCANLPFLNQRLFAVVPFGATKKNAWVRIGELIVLYFVVGALGFWLE CCCHHHHHHHHHHHCCCCCCCCCEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH SRAGNRFEQGWQFYAITFSLFVVFAFPGFTFQYLVKRR HCCCCCHHHCHHHHHHHHHHHHHHHCCCHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA