| Definition | Burkholderia cenocepacia HI2424 chromosome 1, complete sequence. |
|---|---|
| Accession | NC_008542 |
| Length | 3,483,902 |
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The map label for this gene is 116690254
Identifier: 116690254
GI number: 116690254
Start: 2487767
End: 2488189
Strand: Reverse
Name: 116690254
Synonym: Bcen2424_2233
Alternate gene names: NA
Gene position: 2488189-2487767 (Counterclockwise)
Preceding gene: 116690255
Following gene: 116690253
Centisome position: 71.42
GC content: 65.96
Gene sequence:
>423_bases ATGAAGGTCCTCGATTTACAGTGCCCGCACGGTCATCGGTTCGAAGGCTGGTTCGCTTCCGCCGATGAATTCGAAGCGCA GTTGTCCCGCAAGCTGGTCGAATGTCCGGTGTGCGGGACCACCGAGGTCAACCGTCTGCCGTCGGCGCCGCGCCTGAACC TGTCGGGCGCGACGCAGGCGCAGCCGGCCGATCCGCGTGCGCTGCAGGCGCAGGTGATGCGCGCGCTGCGCGAGGTGCTG GAGAAGACCGAGAACGTGGGCGAGCGCTTCGCCGAGGAAGCGCGGCGCATCCATTACAACGAGGCGCCCGCACGCAGCAT TCGCGGCGTCACGACGCCAGAGGATGCGCAGTCCTTGGTCGAAGAAGGCATCGACGTGATGCCGCTGCCGATTCCAGCCG CGCTGAAAGAACCGCTGCAATGA
Upstream 100 bases:
>100_bases ATCCCGTGATGTGGCGCATTCGCGCCGCGTGATCGCGATTTAGCACGATCGTTCACAAAACCGCTTTTTGCGCTACACTC GTCACACGCCCTGATTCAGC
Downstream 100 bases:
>100_bases CGTACGCAGTGTGTCCTGGCCGGCCCGGACGGTCGCGGACAGGAGACACTGCGCATGGATCTGGATTATTCCCCCGCCGA CGACGCGTTCCGCGTTGACG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 140; Mature: 140
Protein sequence:
>140_residues MKVLDLQCPHGHRFEGWFASADEFEAQLSRKLVECPVCGTTEVNRLPSAPRLNLSGATQAQPADPRALQAQVMRALREVL EKTENVGERFAEEARRIHYNEAPARSIRGVTTPEDAQSLVEEGIDVMPLPIPAALKEPLQ
Sequences:
>Translated_140_residues MKVLDLQCPHGHRFEGWFASADEFEAQLSRKLVECPVCGTTEVNRLPSAPRLNLSGATQAQPADPRALQAQVMRALREVL EKTENVGERFAEEARRIHYNEAPARSIRGVTTPEDAQSLVEEGIDVMPLPIPAALKEPLQ >Mature_140_residues MKVLDLQCPHGHRFEGWFASADEFEAQLSRKLVECPVCGTTEVNRLPSAPRLNLSGATQAQPADPRALQAQVMRALREVL EKTENVGERFAEEARRIHYNEAPARSIRGVTTPEDAQSLVEEGIDVMPLPIPAALKEPLQ
Specific function: Unknown
COG id: COG5319
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 15511; Mature: 15511
Theoretical pI: Translated: 5.02; Mature: 5.02
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.1 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 2.1 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 4.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKVLDLQCPHGHRFEGWFASADEFEAQLSRKLVECPVCGTTEVNRLPSAPRLNLSGATQA CCEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCHHCCCCCCCCCCCCCCCC QPADPRALQAQVMRALREVLEKTENVGERFAEEARRIHYNEAPARSIRGVTTPEDAQSLV CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHCCCCCCCHHHHHHH EEGIDVMPLPIPAALKEPLQ HCCCCCCCCCCCHHHHCCCC >Mature Secondary Structure MKVLDLQCPHGHRFEGWFASADEFEAQLSRKLVECPVCGTTEVNRLPSAPRLNLSGATQA CCEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCHHCCCCCCCCCCCCCCCC QPADPRALQAQVMRALREVLEKTENVGERFAEEARRIHYNEAPARSIRGVTTPEDAQSLV CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHCCCCCCCHHHHHHH EEGIDVMPLPIPAALKEPLQ HCCCCCCCCCCCHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA