| Definition | Burkholderia cenocepacia HI2424 chromosome 1, complete sequence. |
|---|---|
| Accession | NC_008542 |
| Length | 3,483,902 |
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The map label for this gene is yhhW [C]
Identifier: 116690223
GI number: 116690223
Start: 2453179
End: 2454051
Strand: Direct
Name: yhhW [C]
Synonym: Bcen2424_2202
Alternate gene names: 116690223
Gene position: 2453179-2454051 (Clockwise)
Preceding gene: 116690221
Following gene: 116690224
Centisome position: 70.41
GC content: 67.81
Gene sequence:
>873_bases ATGACCACCGCTCGCTCGCTTGATCGTACCTACCCCGCGCTTCGCACCACCGAAGGCGGCGGTTTCGTGGTTCACCGTCC GTTCCCGACGCGGCTGCTGATGGACTTCGATCCGTTCCTGCTGCTCGATGAAATGGGCCCCGTCGACTACGCCCCCGGCG AAGCCGTGGGCGCGCCCGACCATCCGCATCGCGGCTTCGAGACCGTGACGTACGCGCTCGACGGGCGCTTCCGCCATCGC GACTCGTCCGGCCATACCGGCACGCTCGGCCCCGGCGACGTGCAGTGGATGACGGCCGGCGCCGGCGTCGTGCACAGCGA GATGCCTGATCCGGCGTTCGCCGAGGCAGGCGGGCGTTCCCACGGCTTCCAGCTGTGGGTCAACCTGCCGCGCCGCGACA AGATGATCGCACCGCTCTACCAGGAGATCCCGGCCGCCCGCATTCCGACCGCGACGTCGCCGGACGGCCGCGCGCGTGTG CGCGTCATCGCCGGCGAAGCATTCGGCGTACAGGCCGCGATCGAGACGCGCACGCCGATTCTCTATCAGCACTTCACGCT GGAGCCGGGTGCAACCGTCACACAGCCCGTGCCGGCCGGTTATCGCGTGTTTGCCTATCCGATCGACGGAACGGGCCTCT ACGGGCCTGACAGGCAGGCGGTCGACGCACGGCACATGATCGTCTACGGAGACGATGGCGACACCGTCACGTTCGCTGCC GGCGACACGTCGCTCGACCTGCTGCTGATCGGCGGCGTACCGCTCAACGAGCCGATCGTCCGCTACGGCCCGTTCGTGAT GAATACCGAAGAAGAGATCCGGCAGGCCGTCGTCGACTACCAGACCGGTCGCATGGGTCGCATCGAAGCGTAA
Upstream 100 bases:
>100_bases CAATCCATTGCGAACGGCCGCAAATCGGACGGGAAAACGCCCAATATAATAGCGCTATGTTTCAAAAATAACGCTATTCC GATGATTTCGAGGGCTTCCC
Downstream 100 bases:
>100_bases ATCGGATCGGGGTCACAGGGGCCGCGAAGCGGATGGTTTTGCGTCACAATAAGTTCTTGAACCATGTGGCCAGCCGCCAC CAGAAGGAACCCGCCCCTTG
Product: pirin domain-containing protein
Products: NA
Alternate protein names: Putative quercetinase; Pirin-like protein PA2418 [H]
Number of amino acids: Translated: 290; Mature: 289
Protein sequence:
>290_residues MTTARSLDRTYPALRTTEGGGFVVHRPFPTRLLMDFDPFLLLDEMGPVDYAPGEAVGAPDHPHRGFETVTYALDGRFRHR DSSGHTGTLGPGDVQWMTAGAGVVHSEMPDPAFAEAGGRSHGFQLWVNLPRRDKMIAPLYQEIPAARIPTATSPDGRARV RVIAGEAFGVQAAIETRTPILYQHFTLEPGATVTQPVPAGYRVFAYPIDGTGLYGPDRQAVDARHMIVYGDDGDTVTFAA GDTSLDLLLIGGVPLNEPIVRYGPFVMNTEEEIRQAVVDYQTGRMGRIEA
Sequences:
>Translated_290_residues MTTARSLDRTYPALRTTEGGGFVVHRPFPTRLLMDFDPFLLLDEMGPVDYAPGEAVGAPDHPHRGFETVTYALDGRFRHR DSSGHTGTLGPGDVQWMTAGAGVVHSEMPDPAFAEAGGRSHGFQLWVNLPRRDKMIAPLYQEIPAARIPTATSPDGRARV RVIAGEAFGVQAAIETRTPILYQHFTLEPGATVTQPVPAGYRVFAYPIDGTGLYGPDRQAVDARHMIVYGDDGDTVTFAA GDTSLDLLLIGGVPLNEPIVRYGPFVMNTEEEIRQAVVDYQTGRMGRIEA >Mature_289_residues TTARSLDRTYPALRTTEGGGFVVHRPFPTRLLMDFDPFLLLDEMGPVDYAPGEAVGAPDHPHRGFETVTYALDGRFRHRD SSGHTGTLGPGDVQWMTAGAGVVHSEMPDPAFAEAGGRSHGFQLWVNLPRRDKMIAPLYQEIPAARIPTATSPDGRARVR VIAGEAFGVQAAIETRTPILYQHFTLEPGATVTQPVPAGYRVFAYPIDGTGLYGPDRQAVDARHMIVYGDDGDTVTFAAG DTSLDLLLIGGVPLNEPIVRYGPFVMNTEEEIRQAVVDYQTGRMGRIEA
Specific function: Putative quercetin 2,3-dioxygenase [H]
COG id: COG1741
COG function: function code R; Pirin-related protein
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the pirin family [H]
Homologues:
Organism=Homo sapiens, GI66363697, Length=293, Percent_Identity=44.0273037542662, Blast_Score=233, Evalue=2e-61, Organism=Homo sapiens, GI4505823, Length=293, Percent_Identity=44.0273037542662, Blast_Score=233, Evalue=2e-61,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011051 - InterPro: IPR012093 - InterPro: IPR008778 - InterPro: IPR003829 - InterPro: IPR014710 [H]
Pfam domain/function: PF02678 Pirin; PF05726 Pirin_C [H]
EC number: =1.13.11.24 [H]
Molecular weight: Translated: 31549; Mature: 31418
Theoretical pI: Translated: 5.15; Mature: 5.15
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTTARSLDRTYPALRTTEGGGFVVHRPFPTRLLMDFDPFLLLDEMGPVDYAPGEAVGAPD CCCHHHHHHCCCCEEEECCCCEEEECCCCCEEEECCCCEEEEECCCCCCCCCCCCCCCCC HPHRGFETVTYALDGRFRHRDSSGHTGTLGPGDVQWMTAGAGVVHSEMPDPAFAEAGGRS CCCCCCEEEEEEECCEEEECCCCCCCCCCCCCCEEEEECCCCEEECCCCCCHHHHCCCCC HGFQLWVNLPRRDKMIAPLYQEIPAARIPTATSPDGRARVRVIAGEAFGVQAAIETRTPI CCEEEEEECCCCCCEEHHHHHHCCCCCCCCCCCCCCCEEEEEEECCCCCEEEEECCCCCE LYQHFTLEPGATVTQPVPAGYRVFAYPIDGTGLYGPDRQAVDARHMIVYGDDGDTVTFAA EEEEEEECCCCCCCCCCCCCCEEEEEEECCCCCCCCCCCCCCCEEEEEECCCCCEEEEEE GDTSLDLLLIGGVPLNEPIVRYGPFVMNTEEEIRQAVVDYQTGRMGRIEA CCCCEEEEEECCCCCCCCHHHHCCEEECCHHHHHHHHHHHCCCCCCCCCC >Mature Secondary Structure TTARSLDRTYPALRTTEGGGFVVHRPFPTRLLMDFDPFLLLDEMGPVDYAPGEAVGAPD CCHHHHHHCCCCEEEECCCCEEEECCCCCEEEECCCCEEEEECCCCCCCCCCCCCCCCC HPHRGFETVTYALDGRFRHRDSSGHTGTLGPGDVQWMTAGAGVVHSEMPDPAFAEAGGRS CCCCCCEEEEEEECCEEEECCCCCCCCCCCCCCEEEEECCCCEEECCCCCCHHHHCCCCC HGFQLWVNLPRRDKMIAPLYQEIPAARIPTATSPDGRARVRVIAGEAFGVQAAIETRTPI CCEEEEEECCCCCCEEHHHHHHCCCCCCCCCCCCCCCEEEEEEECCCCCEEEEECCCCCE LYQHFTLEPGATVTQPVPAGYRVFAYPIDGTGLYGPDRQAVDARHMIVYGDDGDTVTFAA EEEEEEECCCCCCCCCCCCCCEEEEEEECCCCCCCCCCCCCCCEEEEEECCCCCEEEEEE GDTSLDLLLIGGVPLNEPIVRYGPFVMNTEEEIRQAVVDYQTGRMGRIEA CCCCEEEEEECCCCCCCCHHHHCCEEECCHHHHHHHHHHHCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 10984043 [H]