| Definition | Burkholderia cenocepacia HI2424 chromosome 1, complete sequence. |
|---|---|
| Accession | NC_008542 |
| Length | 3,483,902 |
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The map label for this gene is cicA [H]
Identifier: 116690206
GI number: 116690206
Start: 2434768
End: 2435388
Strand: Reverse
Name: cicA [H]
Synonym: Bcen2424_2185
Alternate gene names: 116690206
Gene position: 2435388-2434768 (Counterclockwise)
Preceding gene: 116690210
Following gene: 116690204
Centisome position: 69.9
GC content: 68.6
Gene sequence:
>621_bases ATGACCGACCGCATCGTCGCCGCCTTCGATTTCGACGGCACCATCACGACCACCGACAGCTTTCGCCATTTCGTCCGCCA GGCGGTCGGTACGCCGCGTTTCGCGTGGGCCGGGCTGCGCGCGCTGCCGTGGATTGTCGCGATGAAGGCGGGGCTGCTGT CGCGCGGCGACGCGAAGGCGAAGTTCGCGTCGTTCGCGTTCGGGCCGATTCGTGAAGACACGCTCGATGCGCAGGCGCGC ACATTCGTCGACGGTTATCTGCCGCGCCTCGTGCGTCCGGAAATGCTCGAGCGCATCCGCGAGCATCGCGCGCGTGGGCA TGAAGTCGTGCTGGTCAGCGCGTCGCCGTCGCTGTATCTGGAGAAGTGGGCGAAGACGGCCGGCTTCGACGCGGTGCTCG CGACGCGGCTCGCGTTCGAGCGCGGGGTCTTCACCGGGCGCCTCGACGGCGAGAACTGCTGGGGGCCGCAGAAGGTCGTG CGGCTGCGCGGATGGTGGGGCAACCGGCCGCCGAAGCAGTTGTTCGCGTATGGCGACAGCCGCGGCGACAAGGAAATGGC CGAGCTCGCGAACTGGTCGTGGATTCGCGGGCAGGGGCCGATGCCGCCGATCGACGCTTGA
Upstream 100 bases:
>100_bases GACCGCCGAGCGGGCGTCGGAACGGACTCTACGGTTTCGCGCGGGCCCCCGCGAGTCTGCTATCTTCCCGGGCATCTCAT CGCTTTCCCGCCGATTCTCC
Downstream 100 bases:
>100_bases TGAGGCGCTGACGCGGAGCGCCGCCGGCGTTACGCGTCGGCCTGCGCGTGGTGCGTGCGGCGAGACGGACGATAGCCGCC CCAGCGATTCGCACGGGCGA
Product: HAD family hydrolase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 206; Mature: 205
Protein sequence:
>206_residues MTDRIVAAFDFDGTITTTDSFRHFVRQAVGTPRFAWAGLRALPWIVAMKAGLLSRGDAKAKFASFAFGPIREDTLDAQAR TFVDGYLPRLVRPEMLERIREHRARGHEVVLVSASPSLYLEKWAKTAGFDAVLATRLAFERGVFTGRLDGENCWGPQKVV RLRGWWGNRPPKQLFAYGDSRGDKEMAELANWSWIRGQGPMPPIDA
Sequences:
>Translated_206_residues MTDRIVAAFDFDGTITTTDSFRHFVRQAVGTPRFAWAGLRALPWIVAMKAGLLSRGDAKAKFASFAFGPIREDTLDAQAR TFVDGYLPRLVRPEMLERIREHRARGHEVVLVSASPSLYLEKWAKTAGFDAVLATRLAFERGVFTGRLDGENCWGPQKVV RLRGWWGNRPPKQLFAYGDSRGDKEMAELANWSWIRGQGPMPPIDA >Mature_205_residues TDRIVAAFDFDGTITTTDSFRHFVRQAVGTPRFAWAGLRALPWIVAMKAGLLSRGDAKAKFASFAFGPIREDTLDAQART FVDGYLPRLVRPEMLERIREHRARGHEVVLVSASPSLYLEKWAKTAGFDAVLATRLAFERGVFTGRLDGENCWGPQKVVR LRGWWGNRPPKQLFAYGDSRGDKEMAELANWSWIRGQGPMPPIDA
Specific function: Unknown
COG id: COG0560
COG function: function code E; Phosphoserine phosphatase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005834 - InterPro: IPR023214 - InterPro: IPR006383 - InterPro: IPR006385 [H]
Pfam domain/function: PF00702 Hydrolase [H]
EC number: NA
Molecular weight: Translated: 23153; Mature: 23022
Theoretical pI: Translated: 10.50; Mature: 10.50
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTDRIVAAFDFDGTITTTDSFRHFVRQAVGTPRFAWAGLRALPWIVAMKAGLLSRGDAKA CCCCEEEEEECCCEEECHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCCHH KFASFAFGPIREDTLDAQARTFVDGYLPRLVRPEMLERIREHRARGHEVVLVSASPSLYL HHHHHCCCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCEEEEEECCCHHHH EKWAKTAGFDAVLATRLAFERGVFTGRLDGENCWGPQKVVRLRGWWGNRPPKQLFAYGDS HHHHHHCCHHHHHHHHHHHHHCCEEECCCCCCCCCHHHHHEECCCCCCCCHHHHEECCCC RGDKEMAELANWSWIRGQGPMPPIDA CCHHHHHHHHCCCEECCCCCCCCCCC >Mature Secondary Structure TDRIVAAFDFDGTITTTDSFRHFVRQAVGTPRFAWAGLRALPWIVAMKAGLLSRGDAKA CCCEEEEEECCCEEECHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCCHH KFASFAFGPIREDTLDAQARTFVDGYLPRLVRPEMLERIREHRARGHEVVLVSASPSLYL HHHHHCCCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCEEEEEECCCHHHH EKWAKTAGFDAVLATRLAFERGVFTGRLDGENCWGPQKVVRLRGWWGNRPPKQLFAYGDS HHHHHHCCHHHHHHHHHHHHHCCEEECCCCCCCCCHHHHHEECCCCCCCCHHHHEECCCC RGDKEMAELANWSWIRGQGPMPPIDA CCHHHHHHHHCCCEECCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 11169108 [H]