Click here to switch to the map view.

The map label for this gene is pbpG [H]

Identifier: 116690154

GI number: 116690154

Start: 2364464

End: 2365630

Strand: Reverse

Name: pbpG [H]

Synonym: Bcen2424_2133

Alternate gene names: 116690154

Gene position: 2365630-2364464 (Counterclockwise)

Preceding gene: 116690156

Following gene: 116690152

Centisome position: 67.9

GC content: 66.67

Gene sequence:

>1167_bases
ATGAAAGCCGAATCGTTTTCACCGCGCAGATTGTTGCAGAGCATGACGCTCGGCACCGCTGTGTCGGTCGCAGTCGCGTT
GCTGGCGACCACCGCGTCCGTCACGCCCGCCGACGCCTTCGCCGCCACTGCGAAGACCCAAGCCGCCAAGAAAAAGGCCG
TCGCTCCTGCTTCGTCAGCGAAGAAGAAGTCGGCCAAGGCGACCACCGATAAATCCGCCAAGGTCGCCGCGGCCGATGCG
CCGCGCGCGAAAGCGTCGCGCAAGCGCGTGACGCTCGCGGCGAGCAACGTGCACGGCGGCCATCGCGGCGCGGTGCGCAA
GGTCGCGTTCCAGCCGCGCCGTCCGACGGTCGGCCAGGCGTTCGGTCTGCACGATACGCCCGACGCGCTCGCGCTGCGCT
CCAGCGTCGCGTACGTCGTCGACCAGAATTCCGGCGAGCCGCTGTTCGACAAGAATTCGCACGCGGTCGTGCCGATCGCG
TCGATCTCGAAGCTGATGACGGCCATGGTCGTGCTCGACGCGAAGTCGCCGATGACCGACCAGCTCGAAGTCACCGACGA
AGACCGCGACTACGAGAAGGGCACGGGCTCGCGCCTGTCGGTGGGCTCGGTGCTGTCGCGCGAGGACATGCTGCACATCG
CGCTGATGGCGTCGGAAAACCGTGCGGCGGCCGCGCTGTCGCGTTACTACCCGGGCGGCCGTCCGGCGTTCATCGCGGCG
ATGAACGCAAAGGCGAAGGCGCTCGGCATGACCGATACGCACTTCGAGAATTCGACCGGCCTGTCGAGCTCGAACGTGTC
GAGCGCGCGCGACCTCGTGAAGATGGTCAATGCGGCGTACCAGTACCCGATGATCCGCCAGTTCTCGACCGATCGCACGT
ACGAGGTGTACACGGGCAAGCGCAACCTGGTCTACAACAGCACCAACGCGCTGATCCGCGGCAACGGTTCGTGGGACATC
GGCCTGCAGAAGACGGGCTTCATCAACGAAGCGGGTGAATGCCTCGTGATGCAGGCGACGATCCACGGCCGGCCGATGGT
GATGGTGCTGCTGGATTCGTTCGGCAAGTACTCGCGCTTCGCCGACGCCTCGCGCCTGCGCAACTGGCTCGATGCCGGCG
GCGGCGAACGCCTGACGGCGGCCAACACGCCGGCCGGCGGCACCTGA

Upstream 100 bases:

>100_bases
CATTCCGGTTTAAAGACGATCGGTAAGTGCCTAATATTGCTCTTTTTTTCAGCTTTAACTACACTTGCGGAAACCTCCCG
CCCGCTTTGTCCAGACCCCA

Downstream 100 bases:

>100_bases
TCGTGTGCGGCGGTTCGCCGCCGTACCGCACCGGTTGCTGCAACGAAAAAGCCCCGCAATCGCGGGGCTTTTTTTATCCG
GCGAAACCGGAATCGGAGCC

Product: peptidase S11, D-alanyl-D-alanine carboxypeptidase 1

Products: NA

Alternate protein names: DD-endopeptidase; Penicillin-binding protein 5; PBP-5 [H]

Number of amino acids: Translated: 388; Mature: 388

Protein sequence:

>388_residues
MKAESFSPRRLLQSMTLGTAVSVAVALLATTASVTPADAFAATAKTQAAKKKAVAPASSAKKKSAKATTDKSAKVAAADA
PRAKASRKRVTLAASNVHGGHRGAVRKVAFQPRRPTVGQAFGLHDTPDALALRSSVAYVVDQNSGEPLFDKNSHAVVPIA
SISKLMTAMVVLDAKSPMTDQLEVTDEDRDYEKGTGSRLSVGSVLSREDMLHIALMASENRAAAALSRYYPGGRPAFIAA
MNAKAKALGMTDTHFENSTGLSSSNVSSARDLVKMVNAAYQYPMIRQFSTDRTYEVYTGKRNLVYNSTNALIRGNGSWDI
GLQKTGFINEAGECLVMQATIHGRPMVMVLLDSFGKYSRFADASRLRNWLDAGGGERLTAANTPAGGT

Sequences:

>Translated_388_residues
MKAESFSPRRLLQSMTLGTAVSVAVALLATTASVTPADAFAATAKTQAAKKKAVAPASSAKKKSAKATTDKSAKVAAADA
PRAKASRKRVTLAASNVHGGHRGAVRKVAFQPRRPTVGQAFGLHDTPDALALRSSVAYVVDQNSGEPLFDKNSHAVVPIA
SISKLMTAMVVLDAKSPMTDQLEVTDEDRDYEKGTGSRLSVGSVLSREDMLHIALMASENRAAAALSRYYPGGRPAFIAA
MNAKAKALGMTDTHFENSTGLSSSNVSSARDLVKMVNAAYQYPMIRQFSTDRTYEVYTGKRNLVYNSTNALIRGNGSWDI
GLQKTGFINEAGECLVMQATIHGRPMVMVLLDSFGKYSRFADASRLRNWLDAGGGERLTAANTPAGGT
>Mature_388_residues
MKAESFSPRRLLQSMTLGTAVSVAVALLATTASVTPADAFAATAKTQAAKKKAVAPASSAKKKSAKATTDKSAKVAAADA
PRAKASRKRVTLAASNVHGGHRGAVRKVAFQPRRPTVGQAFGLHDTPDALALRSSVAYVVDQNSGEPLFDKNSHAVVPIA
SISKLMTAMVVLDAKSPMTDQLEVTDEDRDYEKGTGSRLSVGSVLSREDMLHIALMASENRAAAALSRYYPGGRPAFIAA
MNAKAKALGMTDTHFENSTGLSSSNVSSARDLVKMVNAAYQYPMIRQFSTDRTYEVYTGKRNLVYNSTNALIRGNGSWDI
GLQKTGFINEAGECLVMQATIHGRPMVMVLLDSFGKYSRFADASRLRNWLDAGGGERLTAANTPAGGT

Specific function: Cell wall formation [H]

COG id: COG1686

COG function: function code M; D-alanyl-D-alanine carboxypeptidase

Gene ontology:

Cell location: Periplasm (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the peptidase S11 family [H]

Homologues:

Organism=Escherichia coli, GI87082054, Length=244, Percent_Identity=51.6393442622951, Blast_Score=240, Evalue=1e-64,
Organism=Escherichia coli, GI1787062, Length=282, Percent_Identity=28.0141843971631, Blast_Score=69, Evalue=7e-13,
Organism=Escherichia coli, GI87082022, Length=301, Percent_Identity=26.2458471760797, Blast_Score=69, Evalue=8e-13,
Organism=Escherichia coli, GI1786851, Length=245, Percent_Identity=26.1224489795918, Blast_Score=66, Evalue=3e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR012338
- InterPro:   IPR018044
- InterPro:   IPR001967 [H]

Pfam domain/function: PF00768 Peptidase_S11 [H]

EC number: 3.4.99.- [C]

Molecular weight: Translated: 41180; Mature: 41180

Theoretical pI: Translated: 10.53; Mature: 10.53

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
3.6 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
3.6 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKAESFSPRRLLQSMTLGTAVSVAVALLATTASVTPADAFAATAKTQAAKKKAVAPASSA
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCCHHH
KKKSAKATTDKSAKVAAADAPRAKASRKRVTLAASNVHGGHRGAVRKVAFQPRRPTVGQA
HHHCCCCCCCCCCEEEECCCCCHHHCCCEEEEEECCCCCCCCCHHHHHEECCCCCCCCCC
FGLHDTPDALALRSSVAYVVDQNSGEPLFDKNSHAVVPIASISKLMTAMVVLDAKSPMTD
CCCCCCCHHHHHHCCEEEEEECCCCCCCCCCCCCEEEEHHHHHHHHHHHHEEECCCCCCC
QLEVTDEDRDYEKGTGSRLSVGSVLSREDMLHIALMASENRAAAALSRYYPGGRPAFIAA
CEEECCCCCCCCCCCCCEEEHHHHHCCCCEEEEEEEECCCHHHHHHHHHCCCCCEEEEEE
MNAKAKALGMTDTHFENSTGLSSSNVSSARDLVKMVNAAYQYPMIRQFSTDRTYEVYTGK
ECCCCEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCHHHHCCCCCEEEEEECC
RNLVYNSTNALIRGNGSWDIGLQKTGFINEAGECLVMQATIHGRPMVMVLLDSFGKYSRF
CEEEEECCCEEEECCCCEEECCCCCCCCCCCCCEEEEEEEECCCCEEEEEEHHCCHHHHH
ADASRLRNWLDAGGGERLTAANTPAGGT
HHHHHHHHHHHCCCCCEEEECCCCCCCC
>Mature Secondary Structure
MKAESFSPRRLLQSMTLGTAVSVAVALLATTASVTPADAFAATAKTQAAKKKAVAPASSA
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCCHHH
KKKSAKATTDKSAKVAAADAPRAKASRKRVTLAASNVHGGHRGAVRKVAFQPRRPTVGQA
HHHCCCCCCCCCCEEEECCCCCHHHCCCEEEEEECCCCCCCCCHHHHHEECCCCCCCCCC
FGLHDTPDALALRSSVAYVVDQNSGEPLFDKNSHAVVPIASISKLMTAMVVLDAKSPMTD
CCCCCCCHHHHHHCCEEEEEECCCCCCCCCCCCCEEEEHHHHHHHHHHHHEEECCCCCCC
QLEVTDEDRDYEKGTGSRLSVGSVLSREDMLHIALMASENRAAAALSRYYPGGRPAFIAA
CEEECCCCCCCCCCCCCEEEHHHHHCCCCEEEEEEEECCCHHHHHHHHHCCCCCEEEEEE
MNAKAKALGMTDTHFENSTGLSSSNVSSARDLVKMVNAAYQYPMIRQFSTDRTYEVYTGK
ECCCCEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCHHHHCCCCCEEEEEECC
RNLVYNSTNALIRGNGSWDIGLQKTGFINEAGECLVMQATIHGRPMVMVLLDSFGKYSRF
CEEEEECCCEEEECCCCEEECCCCCCCCCCCCCEEEEEEEECCCCEEEEEEHHCCHHHHH
ADASRLRNWLDAGGGERLTAANTPAGGT
HHHHHHHHHHHCCCCCEEEECCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 10984043 [H]