| Definition | Burkholderia cenocepacia HI2424 chromosome 1, complete sequence. |
|---|---|
| Accession | NC_008542 |
| Length | 3,483,902 |
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The map label for this gene is 116690122
Identifier: 116690122
GI number: 116690122
Start: 2331949
End: 2332839
Strand: Reverse
Name: 116690122
Synonym: Bcen2424_2101
Alternate gene names: NA
Gene position: 2332839-2331949 (Counterclockwise)
Preceding gene: 116690123
Following gene: 116690121
Centisome position: 66.96
GC content: 70.03
Gene sequence:
>891_bases ATGAGTGCCTCGAGTTCTGTTTCTGATTTCGTCACGGTGCGCGGCGTCCAGCTGCATGTGCGGCGCTGGGGCCGGCCCGA TGCGCCGACGCTGTTCATGCTGCACGGCTGGATGGACGTCGCGGCGTCGTTCCAGTTCGTCGTCGATGCGCTCGCGGGCG ACTGGCAGGTGATCGCGCCCGATGCGCGCGGCTTCGGGCTGTCCGACTGGCCGGTCGCGCGGCAGGGCGGCGGCCACTAC TGGTTCCACGAATACCTGGGCGACCTCGATGCGCTCGTCGACCGCTATGCGCCGACCGGCGAGGTCAACCTGGTCGGACA CAGCATGGGCGCGAACGTCGTGTGCCTGTATGCCGGCGCCCGGCCGGAACGCGTGCGCCGCGTGGTCGATCTCGAAGGGT TCGGGCTCGCGCCGGCCCACGCCGAACAGGCGCCGCGCCGGCTGCGCGGCTGGCTCGACGAGCTGCGCGAGCCGCCCGCG TTGCGGCCGTACGCATCCCTCGACGACGTGGCGGCGCGCCTGATCAAGACCAATCCGCGGCTCGATCCGCGCCGCGCCGC GTTTCTGGCCGCGCACTGGTCGAAACGCGGCGACGACGGCCTCTACCATCTGCTCGCCGACCCGGCGCACAAGATGCCGG GCCCGCTGCTGTACCGGCTCGACGAAGTGATGGCCACCTGGAAGCAGGTGCGGGCGAAGGTGCTGCACGTCGAGGCCGTC AATTCGCCGACGCTCGCGCACCTGGCCGGCGACATCCCGCTGCCCGAATTCAAGGCGCGCTTCAACGCGTTCCCCGACTG GCGCGAGAAGCTCATCGAGGATGCCGGCCACATGGTGCATCACGACCAGCCCGAGCAGATCGCGGCGTTGATCGAGGCGT TCTGCGCATAG
Upstream 100 bases:
>100_bases CCGTACCACCTCGCCGCTAGAGCGCTACCTCGATTGCCGGCCGCCTGAACCGGGGTGTCGCCGCTATAATCGAACGACCA TTCTTTTTTTGGCGGCTGCG
Downstream 100 bases:
>100_bases GCGCGTGGCACGGGCGGCACGGCAGGCGGGCGGCGCAATTGCCGCGTTGCAGTAGAATGAGGCCTTACCTGCCATGCCGA CAATGAACGCCGATCTCCAC
Product: alpha/beta hydrolase fold
Products: NA
Alternate protein names: Hydrolase; Alpha/Beta Hydrolase Fold Protein; Alpha/Beta Fold Family Hydrolase; Alpha/Beta Hydrolase; Hydrolase Alpha/Beta Fold Family; Hydrolase Protein; Hydrolase/Acyltransferase; Beta-Ketoacyl Synthase; Alpha/Beta Hydrolase Superfamily Protein; Lipase LipA; Esterase; Lipase A; Hydrolases Or Acyltransferases; Hydrolase Or Acetyltransferase; Alpha/Beta Superfamily Hydrolase; Hydrolase Or Acytransferase; Polyketide Synthase; Alpha/Beta Hydrolase Fold Family; Alpha/Beta Superfamily Hydrolase/Acyltransferase
Number of amino acids: Translated: 296; Mature: 295
Protein sequence:
>296_residues MSASSSVSDFVTVRGVQLHVRRWGRPDAPTLFMLHGWMDVAASFQFVVDALAGDWQVIAPDARGFGLSDWPVARQGGGHY WFHEYLGDLDALVDRYAPTGEVNLVGHSMGANVVCLYAGARPERVRRVVDLEGFGLAPAHAEQAPRRLRGWLDELREPPA LRPYASLDDVAARLIKTNPRLDPRRAAFLAAHWSKRGDDGLYHLLADPAHKMPGPLLYRLDEVMATWKQVRAKVLHVEAV NSPTLAHLAGDIPLPEFKARFNAFPDWREKLIEDAGHMVHHDQPEQIAALIEAFCA
Sequences:
>Translated_296_residues MSASSSVSDFVTVRGVQLHVRRWGRPDAPTLFMLHGWMDVAASFQFVVDALAGDWQVIAPDARGFGLSDWPVARQGGGHY WFHEYLGDLDALVDRYAPTGEVNLVGHSMGANVVCLYAGARPERVRRVVDLEGFGLAPAHAEQAPRRLRGWLDELREPPA LRPYASLDDVAARLIKTNPRLDPRRAAFLAAHWSKRGDDGLYHLLADPAHKMPGPLLYRLDEVMATWKQVRAKVLHVEAV NSPTLAHLAGDIPLPEFKARFNAFPDWREKLIEDAGHMVHHDQPEQIAALIEAFCA >Mature_295_residues SASSSVSDFVTVRGVQLHVRRWGRPDAPTLFMLHGWMDVAASFQFVVDALAGDWQVIAPDARGFGLSDWPVARQGGGHYW FHEYLGDLDALVDRYAPTGEVNLVGHSMGANVVCLYAGARPERVRRVVDLEGFGLAPAHAEQAPRRLRGWLDELREPPAL RPYASLDDVAARLIKTNPRLDPRRAAFLAAHWSKRGDDGLYHLLADPAHKMPGPLLYRLDEVMATWKQVRAKVLHVEAVN SPTLAHLAGDIPLPEFKARFNAFPDWREKLIEDAGHMVHHDQPEQIAALIEAFCA
Specific function: Unknown
COG id: COG0596
COG function: function code R; Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily)
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 32980; Mature: 32849
Theoretical pI: Translated: 6.76; Mature: 6.76
Prosite motif: PS00120 LIPASE_SER
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSASSSVSDFVTVRGVQLHVRRWGRPDAPTLFMLHGWMDVAASFQFVVDALAGDWQVIAP CCCCCCHHHHHHHCCCEEEEECCCCCCCCEEEEEHHHHHHHHHHHHHHHHHCCCCEEECC DARGFGLSDWPVARQGGGHYWFHEYLGDLDALVDRYAPTGEVNLVGHSMGANVVCLYAGA CCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCEEEEEECC RPERVRRVVDLEGFGLAPAHAEQAPRRLRGWLDELREPPALRPYASLDDVAARLIKTNPR CHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHCCCC LDPRRAAFLAAHWSKRGDDGLYHLLADPAHKMPGPLLYRLDEVMATWKQVRAKVLHVEAV CCHHHHHHHHHHHCCCCCCCHHHHHCCHHHHCCCHHHHHHHHHHHHHHHHHHHHHEEEEC NSPTLAHLAGDIPLPEFKARFNAFPDWREKLIEDAGHMVHHDQPEQIAALIEAFCA CCCHHHHHHCCCCCHHHHHHHCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCC >Mature Secondary Structure SASSSVSDFVTVRGVQLHVRRWGRPDAPTLFMLHGWMDVAASFQFVVDALAGDWQVIAP CCCCCHHHHHHHCCCEEEEECCCCCCCCEEEEEHHHHHHHHHHHHHHHHHCCCCEEECC DARGFGLSDWPVARQGGGHYWFHEYLGDLDALVDRYAPTGEVNLVGHSMGANVVCLYAGA CCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCEEEEEECC RPERVRRVVDLEGFGLAPAHAEQAPRRLRGWLDELREPPALRPYASLDDVAARLIKTNPR CHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHCCCC LDPRRAAFLAAHWSKRGDDGLYHLLADPAHKMPGPLLYRLDEVMATWKQVRAKVLHVEAV CCHHHHHHHHHHHCCCCCCCHHHHHCCHHHHCCCHHHHHHHHHHHHHHHHHHHHHEEEEC NSPTLAHLAGDIPLPEFKARFNAFPDWREKLIEDAGHMVHHDQPEQIAALIEAFCA CCCHHHHHHCCCCCHHHHHHHCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA