Definition Burkholderia cenocepacia HI2424 chromosome 1, complete sequence.
Accession NC_008542
Length 3,483,902

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The map label for this gene is 116690122

Identifier: 116690122

GI number: 116690122

Start: 2331949

End: 2332839

Strand: Reverse

Name: 116690122

Synonym: Bcen2424_2101

Alternate gene names: NA

Gene position: 2332839-2331949 (Counterclockwise)

Preceding gene: 116690123

Following gene: 116690121

Centisome position: 66.96

GC content: 70.03

Gene sequence:

>891_bases
ATGAGTGCCTCGAGTTCTGTTTCTGATTTCGTCACGGTGCGCGGCGTCCAGCTGCATGTGCGGCGCTGGGGCCGGCCCGA
TGCGCCGACGCTGTTCATGCTGCACGGCTGGATGGACGTCGCGGCGTCGTTCCAGTTCGTCGTCGATGCGCTCGCGGGCG
ACTGGCAGGTGATCGCGCCCGATGCGCGCGGCTTCGGGCTGTCCGACTGGCCGGTCGCGCGGCAGGGCGGCGGCCACTAC
TGGTTCCACGAATACCTGGGCGACCTCGATGCGCTCGTCGACCGCTATGCGCCGACCGGCGAGGTCAACCTGGTCGGACA
CAGCATGGGCGCGAACGTCGTGTGCCTGTATGCCGGCGCCCGGCCGGAACGCGTGCGCCGCGTGGTCGATCTCGAAGGGT
TCGGGCTCGCGCCGGCCCACGCCGAACAGGCGCCGCGCCGGCTGCGCGGCTGGCTCGACGAGCTGCGCGAGCCGCCCGCG
TTGCGGCCGTACGCATCCCTCGACGACGTGGCGGCGCGCCTGATCAAGACCAATCCGCGGCTCGATCCGCGCCGCGCCGC
GTTTCTGGCCGCGCACTGGTCGAAACGCGGCGACGACGGCCTCTACCATCTGCTCGCCGACCCGGCGCACAAGATGCCGG
GCCCGCTGCTGTACCGGCTCGACGAAGTGATGGCCACCTGGAAGCAGGTGCGGGCGAAGGTGCTGCACGTCGAGGCCGTC
AATTCGCCGACGCTCGCGCACCTGGCCGGCGACATCCCGCTGCCCGAATTCAAGGCGCGCTTCAACGCGTTCCCCGACTG
GCGCGAGAAGCTCATCGAGGATGCCGGCCACATGGTGCATCACGACCAGCCCGAGCAGATCGCGGCGTTGATCGAGGCGT
TCTGCGCATAG

Upstream 100 bases:

>100_bases
CCGTACCACCTCGCCGCTAGAGCGCTACCTCGATTGCCGGCCGCCTGAACCGGGGTGTCGCCGCTATAATCGAACGACCA
TTCTTTTTTTGGCGGCTGCG

Downstream 100 bases:

>100_bases
GCGCGTGGCACGGGCGGCACGGCAGGCGGGCGGCGCAATTGCCGCGTTGCAGTAGAATGAGGCCTTACCTGCCATGCCGA
CAATGAACGCCGATCTCCAC

Product: alpha/beta hydrolase fold

Products: NA

Alternate protein names: Hydrolase; Alpha/Beta Hydrolase Fold Protein; Alpha/Beta Fold Family Hydrolase; Alpha/Beta Hydrolase; Hydrolase Alpha/Beta Fold Family; Hydrolase Protein; Hydrolase/Acyltransferase; Beta-Ketoacyl Synthase; Alpha/Beta Hydrolase Superfamily Protein; Lipase LipA; Esterase; Lipase A; Hydrolases Or Acyltransferases; Hydrolase Or Acetyltransferase; Alpha/Beta Superfamily Hydrolase; Hydrolase Or Acytransferase; Polyketide Synthase; Alpha/Beta Hydrolase Fold Family; Alpha/Beta Superfamily Hydrolase/Acyltransferase

Number of amino acids: Translated: 296; Mature: 295

Protein sequence:

>296_residues
MSASSSVSDFVTVRGVQLHVRRWGRPDAPTLFMLHGWMDVAASFQFVVDALAGDWQVIAPDARGFGLSDWPVARQGGGHY
WFHEYLGDLDALVDRYAPTGEVNLVGHSMGANVVCLYAGARPERVRRVVDLEGFGLAPAHAEQAPRRLRGWLDELREPPA
LRPYASLDDVAARLIKTNPRLDPRRAAFLAAHWSKRGDDGLYHLLADPAHKMPGPLLYRLDEVMATWKQVRAKVLHVEAV
NSPTLAHLAGDIPLPEFKARFNAFPDWREKLIEDAGHMVHHDQPEQIAALIEAFCA

Sequences:

>Translated_296_residues
MSASSSVSDFVTVRGVQLHVRRWGRPDAPTLFMLHGWMDVAASFQFVVDALAGDWQVIAPDARGFGLSDWPVARQGGGHY
WFHEYLGDLDALVDRYAPTGEVNLVGHSMGANVVCLYAGARPERVRRVVDLEGFGLAPAHAEQAPRRLRGWLDELREPPA
LRPYASLDDVAARLIKTNPRLDPRRAAFLAAHWSKRGDDGLYHLLADPAHKMPGPLLYRLDEVMATWKQVRAKVLHVEAV
NSPTLAHLAGDIPLPEFKARFNAFPDWREKLIEDAGHMVHHDQPEQIAALIEAFCA
>Mature_295_residues
SASSSVSDFVTVRGVQLHVRRWGRPDAPTLFMLHGWMDVAASFQFVVDALAGDWQVIAPDARGFGLSDWPVARQGGGHYW
FHEYLGDLDALVDRYAPTGEVNLVGHSMGANVVCLYAGARPERVRRVVDLEGFGLAPAHAEQAPRRLRGWLDELREPPAL
RPYASLDDVAARLIKTNPRLDPRRAAFLAAHWSKRGDDGLYHLLADPAHKMPGPLLYRLDEVMATWKQVRAKVLHVEAVN
SPTLAHLAGDIPLPEFKARFNAFPDWREKLIEDAGHMVHHDQPEQIAALIEAFCA

Specific function: Unknown

COG id: COG0596

COG function: function code R; Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily)

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 32980; Mature: 32849

Theoretical pI: Translated: 6.76; Mature: 6.76

Prosite motif: PS00120 LIPASE_SER

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSASSSVSDFVTVRGVQLHVRRWGRPDAPTLFMLHGWMDVAASFQFVVDALAGDWQVIAP
CCCCCCHHHHHHHCCCEEEEECCCCCCCCEEEEEHHHHHHHHHHHHHHHHHCCCCEEECC
DARGFGLSDWPVARQGGGHYWFHEYLGDLDALVDRYAPTGEVNLVGHSMGANVVCLYAGA
CCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCEEEEEECC
RPERVRRVVDLEGFGLAPAHAEQAPRRLRGWLDELREPPALRPYASLDDVAARLIKTNPR
CHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHCCCC
LDPRRAAFLAAHWSKRGDDGLYHLLADPAHKMPGPLLYRLDEVMATWKQVRAKVLHVEAV
CCHHHHHHHHHHHCCCCCCCHHHHHCCHHHHCCCHHHHHHHHHHHHHHHHHHHHHEEEEC
NSPTLAHLAGDIPLPEFKARFNAFPDWREKLIEDAGHMVHHDQPEQIAALIEAFCA
CCCHHHHHHCCCCCHHHHHHHCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCC
>Mature Secondary Structure 
SASSSVSDFVTVRGVQLHVRRWGRPDAPTLFMLHGWMDVAASFQFVVDALAGDWQVIAP
CCCCCHHHHHHHCCCEEEEECCCCCCCCEEEEEHHHHHHHHHHHHHHHHHCCCCEEECC
DARGFGLSDWPVARQGGGHYWFHEYLGDLDALVDRYAPTGEVNLVGHSMGANVVCLYAGA
CCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCEEEEEECC
RPERVRRVVDLEGFGLAPAHAEQAPRRLRGWLDELREPPALRPYASLDDVAARLIKTNPR
CHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHCCCC
LDPRRAAFLAAHWSKRGDDGLYHLLADPAHKMPGPLLYRLDEVMATWKQVRAKVLHVEAV
CCHHHHHHHHHHHCCCCCCCHHHHHCCHHHHCCCHHHHHHHHHHHHHHHHHHHHHEEEEC
NSPTLAHLAGDIPLPEFKARFNAFPDWREKLIEDAGHMVHHDQPEQIAALIEAFCA
CCCHHHHHHCCCCCHHHHHHHCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA