Definition Burkholderia cenocepacia HI2424 chromosome 1, complete sequence.
Accession NC_008542
Length 3,483,902

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The map label for this gene is 116690115

Identifier: 116690115

GI number: 116690115

Start: 2325595

End: 2326740

Strand: Reverse

Name: 116690115

Synonym: Bcen2424_2094

Alternate gene names: NA

Gene position: 2326740-2325595 (Counterclockwise)

Preceding gene: 116690116

Following gene: 116690114

Centisome position: 66.79

GC content: 67.8

Gene sequence:

>1146_bases
ATGAAACGTTTCGCCTTTTCCTCTCGCGCCATCCAGTTGTCGGTGGTGGCGCTGGCGCTGGGCGCGCTCGCTGGCTGCGA
TACGCTGAACGACTACCTGGCCCCTGACCGGGTCAATTACAAGAACACCGGCTCGGCGCCGCCGCTCGCGGTGCCGAGCG
ACCTGAAGCCGGTGCAGACGACGCAGCAGTTCGTCGCGCCGCCGACCAACGCCGGGCTCGGCACGCTGCCGCCGCGGGCC
ACGACGCAGGCCGGCAATGCGACCGACGGCATTCCGAGCGCGCAGGATCCGCTCGGCATGCACATCGAGCGCGACGGCGA
TCGCCGCTGGCTCGTCGTCGACGGCCGGACGCCCGAGCAGCTGTGGCCGATCCTGAAGGAATTCTGGCAGGAGAACGGCT
TCTCGCTGAAGACCGATGCGCCGTCGACGGGCATCATGGCCACCGACTGGGCCGAGAACCGCGCGAACATTCCGGACGAC
TGGTTCCGCCGCACGATCGGCCGGGTCATCGATTTCGCCTATTCGTCGGGCACGCGCGACCGCTTCCGCACGCTCGTGAA
CCGTACGTCCGACGGCAACACCGACATCTCGATCACGCACAGCGCGATGGAAGAAATGATGGTCGGCCCGCAGGGCGGCA
CGTCGTCGCGCTGGGAGGAGCGTCCGCGCAACCCGGTGCTCGAAGCCGTGTTCCTGTCGAAGCTGATGCAGAAGTTCGGC
CTGACCGACGCGCAGGCGAAGCAGTTGCTGACCGATGCGCGCCCCGCGACGGCGCCGGCGCAGGTCAGCGACACGAGCGG
CGGCGCCGCGACGCTGCAACTGGCTGAGTCGTTCGACCGCGCATGGCTGCGCGTGGGCCTGGCGCTCGACCGGACCAACT
TCACGGTCGACAATCGCGACCGCGAGAAGGGCATGTACACCGTGCGCTATGCGAATTCGATGGAAGAGCTCAAGCGTGAC
GGCCTGTTCGGCAAGCTGTTCTACGGCGGCCCGTCGGCAGCCAAGCCGGGCAAGGAATACCTGATCAACGTGCGCGCGCA
GGGCAATGGCGGCACGCAGGTCGCGGTGGTCGGCGCGAACGGCCAGGTCGACAACTCGTCGGACGCGCAGCGGCTCATTT
CGCTGCTGCACGCGCAGCTGAACTGA

Upstream 100 bases:

>100_bases
CCGCGTCCTGCGGCCGCCGGCTCGACCCCTGATCAACCCGCACCGGCCGGCTCCGTCCGGCGCCGCTCCTGACGAGCGTT
CTAGCAAGACGAAGGATTTC

Downstream 100 bases:

>100_bases
GCGCGTGCGATTCGCCAGCCTCGGAAGCGGCAGCGAAGGCAACGCGCTGGTCGTCGAGGCCTCGAGCGGCACGACGACTA
CCCGCGTGCTGCTCGACTGC

Product: uncharacterized lipoprotein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 381; Mature: 381

Protein sequence:

>381_residues
MKRFAFSSRAIQLSVVALALGALAGCDTLNDYLAPDRVNYKNTGSAPPLAVPSDLKPVQTTQQFVAPPTNAGLGTLPPRA
TTQAGNATDGIPSAQDPLGMHIERDGDRRWLVVDGRTPEQLWPILKEFWQENGFSLKTDAPSTGIMATDWAENRANIPDD
WFRRTIGRVIDFAYSSGTRDRFRTLVNRTSDGNTDISITHSAMEEMMVGPQGGTSSRWEERPRNPVLEAVFLSKLMQKFG
LTDAQAKQLLTDARPATAPAQVSDTSGGAATLQLAESFDRAWLRVGLALDRTNFTVDNRDREKGMYTVRYANSMEELKRD
GLFGKLFYGGPSAAKPGKEYLINVRAQGNGGTQVAVVGANGQVDNSSDAQRLISLLHAQLN

Sequences:

>Translated_381_residues
MKRFAFSSRAIQLSVVALALGALAGCDTLNDYLAPDRVNYKNTGSAPPLAVPSDLKPVQTTQQFVAPPTNAGLGTLPPRA
TTQAGNATDGIPSAQDPLGMHIERDGDRRWLVVDGRTPEQLWPILKEFWQENGFSLKTDAPSTGIMATDWAENRANIPDD
WFRRTIGRVIDFAYSSGTRDRFRTLVNRTSDGNTDISITHSAMEEMMVGPQGGTSSRWEERPRNPVLEAVFLSKLMQKFG
LTDAQAKQLLTDARPATAPAQVSDTSGGAATLQLAESFDRAWLRVGLALDRTNFTVDNRDREKGMYTVRYANSMEELKRD
GLFGKLFYGGPSAAKPGKEYLINVRAQGNGGTQVAVVGANGQVDNSSDAQRLISLLHAQLN
>Mature_381_residues
MKRFAFSSRAIQLSVVALALGALAGCDTLNDYLAPDRVNYKNTGSAPPLAVPSDLKPVQTTQQFVAPPTNAGLGTLPPRA
TTQAGNATDGIPSAQDPLGMHIERDGDRRWLVVDGRTPEQLWPILKEFWQENGFSLKTDAPSTGIMATDWAENRANIPDD
WFRRTIGRVIDFAYSSGTRDRFRTLVNRTSDGNTDISITHSAMEEMMVGPQGGTSSRWEERPRNPVLEAVFLSKLMQKFG
LTDAQAKQLLTDARPATAPAQVSDTSGGAATLQLAESFDRAWLRVGLALDRTNFTVDNRDREKGMYTVRYANSMEELKRD
GLFGKLFYGGPSAAKPGKEYLINVRAQGNGGTQVAVVGANGQVDNSSDAQRLISLLHAQLN

Specific function: Unknown

COG id: COG3317

COG function: function code M; Uncharacterized lipoprotein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 41517; Mature: 41517

Theoretical pI: Translated: 7.60; Mature: 7.60

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKRFAFSSRAIQLSVVALALGALAGCDTLNDYLAPDRVNYKNTGSAPPLAVPSDLKPVQT
CCCCCCCCCHHHHHHHHHHHHHHHCHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCHHHH
TQQFVAPPTNAGLGTLPPRATTQAGNATDGIPSAQDPLGMHIERDGDRRWLVVDGRTPEQ
HHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCEEEEEECCCCHHH
LWPILKEFWQENGFSLKTDAPSTGIMATDWAENRANIPDDWFRRTIGRVIDFAYSSGTRD
HHHHHHHHHHCCCCEEECCCCCCCEEEECCCCCCCCCCHHHHHHHHHHHHHHHHCCCCHH
RFRTLVNRTSDGNTDISITHSAMEEMMVGPQGGTSSRWEERPRNPVLEAVFLSKLMQKFG
HHHHHHHCCCCCCCEEEEEHHHHHHHHCCCCCCCCCHHHHCCCCHHHHHHHHHHHHHHHC
LTDAQAKQLLTDARPATAPAQVSDTSGGAATLQLAESFDRAWLRVGLALDRTNFTVDNRD
CCHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHEEEECCCCEECCCC
REKGMYTVRYANSMEELKRDGLFGKLFYGGPSAAKPGKEYLINVRAQGNGGTQVAVVGAN
CCCCEEEEEEHHHHHHHHHCCCEEEEEECCCCCCCCCCEEEEEEEEECCCCCEEEEEECC
GQVDNSSDAQRLISLLHAQLN
CCCCCCHHHHHHHHHHHHHCC
>Mature Secondary Structure
MKRFAFSSRAIQLSVVALALGALAGCDTLNDYLAPDRVNYKNTGSAPPLAVPSDLKPVQT
CCCCCCCCCHHHHHHHHHHHHHHHCHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCHHHH
TQQFVAPPTNAGLGTLPPRATTQAGNATDGIPSAQDPLGMHIERDGDRRWLVVDGRTPEQ
HHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCEEEEEECCCCHHH
LWPILKEFWQENGFSLKTDAPSTGIMATDWAENRANIPDDWFRRTIGRVIDFAYSSGTRD
HHHHHHHHHHCCCCEEECCCCCCCEEEECCCCCCCCCCHHHHHHHHHHHHHHHHCCCCHH
RFRTLVNRTSDGNTDISITHSAMEEMMVGPQGGTSSRWEERPRNPVLEAVFLSKLMQKFG
HHHHHHHCCCCCCCEEEEEHHHHHHHHCCCCCCCCCHHHHCCCCHHHHHHHHHHHHHHHC
LTDAQAKQLLTDARPATAPAQVSDTSGGAATLQLAESFDRAWLRVGLALDRTNFTVDNRD
CCHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHEEEECCCCEECCCC
REKGMYTVRYANSMEELKRDGLFGKLFYGGPSAAKPGKEYLINVRAQGNGGTQVAVVGAN
CCCCEEEEEEHHHHHHHHHCCCEEEEEECCCCCCCCCCEEEEEEEEECCCCCEEEEEECC
GQVDNSSDAQRLISLLHAQLN
CCCCCCHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 10710307 [H]