Definition Burkholderia cenocepacia HI2424 chromosome 1, complete sequence.
Accession NC_008542
Length 3,483,902

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The map label for this gene is yejA [C]

Identifier: 116690083

GI number: 116690083

Start: 2289343

End: 2291217

Strand: Reverse

Name: yejA [C]

Synonym: Bcen2424_2062

Alternate gene names: 116690083

Gene position: 2291217-2289343 (Counterclockwise)

Preceding gene: 116690084

Following gene: 116690082

Centisome position: 65.77

GC content: 67.89

Gene sequence:

>1875_bases
ATGACGAAGGGTTCGCCCCGGGCCGCCGCCGCGCGTGCCTGCCTTGGCGCGCTGCGGGCCGCCGGCCGCGTGGCCGCGGT
GCTGGCGCTGCATGCGGTGCTGGCCGCGCCGGCCGCGCAGGCGGCCTACGCCATCGCGCAGTACGGCGAGCCGAAGTATC
CGCCGGGCTTCAAGCATTTCGACTACGTGAACCCCGACGCGCCGAAGGGCGGCACGCTCGTGCTCGCGAATCCGAGCCGA
CTGACGTCGTTCGACAAGTTCAATCCGTTCACGATGCGCGGCAACACCGCGCCCGGCATCGACATGCTGTTCGAGAGCCT
CGCGACCGGCAGCTCCGACGAACCGGCTTCCGCCTACGGGCTGCTGGCCGACGACATCGACGTCGCCCCGGACCGCCGTT
CGGTCACGTTCCACCTGAATCCGCGCGCACGCTTTTCGAACGGCGATCGCGTCACGGCCGACGACGTCAAGTTTTCGTTC
GATACGCTCAAGAGCAAGCAGGCCGCACCGCAGTTCGGCGCATATTTCGCGGAAATCGCGAAGGCCGTGGTCGTCGATCC
GGCGACCGTGCGCTTCGAGTTCCGTAGCGCGAACCGCGAACTGCCGCTGATCGCCGGCGGCGTGCCCGTGTTTTCGCGCA
AGTGGGGATTGCGCGCGGACGGCTCGCGCATCCCGTTCGACCAGCTTGCGTTCGAGCAGCCGATCGGCAGCGGCCCGTAC
GTGATCGAGCGCTACGACAACGGCCGCACGATCACCTACCGGCGCAACCCCGCGTACTGGGGCGCCGACCTGCCGGTACG
AGTCGGCACCAACAACTTCGAGCGGATCGTGTACAAGCTGTACGGCGACGGCGTCGCGCGGCTCGAGGCGTTCAAGGCCG
GCGAGTACGACGTGCTCGTCGAGTACATCGCACGCAACTGGACGCGGCGCGACGTCGGCAAGCGTTTCGACAGCGGCGAG
CTCGTCAAGCGCGAATTCCGCCAGCATAACGGCGCCGGCATGCAAGGCTTTTTCGTGAACCTGCGCCGGCCGCTGTTCCG
CGACGTGCGCGTGCGCCAGGCGCTCGACCTGGCGTTCGACTTCGAGTGGCTGAACCGGCAACTGTTCTACAGCGCATACA
CGCGTCTCAACAGTTATTTCGCCGACACCGACCTGCAAGCGACTGGTACGCCGAGCGAAGGCGAGCTGAAGCTGCTGGAG
CCGCTGCGCGCACAGCTCGATCCGGCCGTGTTCGGCCCGACGGTCACGCAGCCGGACACGAATCCGCCGGGCTCGCTGCG
CGCGAACCTGCTGAAGGCGCGCGCCCTGCTCGCGCAGGCCGGCTGGACCTATCGCGACGGCGCGCTGCGCAACGCGAAGG
GCGAGCCGTTCGCGTTCGAGATCCTCGACGATGCGGGCGGCGCGATGGAGGGCGTCGTGACCGCCTACCAGCGCAACCTG
GCGAAGCTCGGCATCGTCGTGCGGTTTCGCACGGCCGATTACGCGCTGCTGCAAAAGCGCCTCGATGCATTCGACTACGA
CATGACGACGATCCGCCTGCCGGGCGTGCAGGTGCCGGGCGCCGAGCAATACTCGCGCTACGCGAGCAAGTTCGCCGACG
AGCCGGGCTCCGACAACTTCATCGGATTGAAATCGCCGGCCGTCGACGCGTTGCTGCATGCGCTCGGCGCCGCGCAAACG
CGCGAGGAACTGCTCGACGCGACGCACGCGCTCGACCGCGTGCTGATGCACGGCTACTACGCGGTCCCGCAGTGGTACAG
CACGACGCACCGCATTGCGTACAAGCGCACGCTCGCCTATCCGCAGACGCTGCCGCTGTACTATTCGGCCGAGGGCTGGG
TCGTGTCGACCTGGTGGGCGAAGCCCGATCACTGA

Upstream 100 bases:

>100_bases
CGTGAGGAAACCGCCCGCGTGGCGGTTTTCTTTTGGCTCGACGGATTGAATGGGTAGAATCGCTCCACGTTACTACCCTC
ATTCGATCGACAGGGCCTCT

Downstream 100 bases:

>100_bases
CCCGCGCCGGCCCTTCGTCCAACCCCGCCATCCGATCACGAGTCGACGCCCTATGTGGAGCTACATCCTCAAACGCCTGC
TGCTGATGATCCCGACGCTC

Product: extracellular solute-binding protein

Products: ADP; phosphate; oligopeptides [Cytoplasm] [C]

Alternate protein names: NA

Number of amino acids: Translated: 624; Mature: 623

Protein sequence:

>624_residues
MTKGSPRAAAARACLGALRAAGRVAAVLALHAVLAAPAAQAAYAIAQYGEPKYPPGFKHFDYVNPDAPKGGTLVLANPSR
LTSFDKFNPFTMRGNTAPGIDMLFESLATGSSDEPASAYGLLADDIDVAPDRRSVTFHLNPRARFSNGDRVTADDVKFSF
DTLKSKQAAPQFGAYFAEIAKAVVVDPATVRFEFRSANRELPLIAGGVPVFSRKWGLRADGSRIPFDQLAFEQPIGSGPY
VIERYDNGRTITYRRNPAYWGADLPVRVGTNNFERIVYKLYGDGVARLEAFKAGEYDVLVEYIARNWTRRDVGKRFDSGE
LVKREFRQHNGAGMQGFFVNLRRPLFRDVRVRQALDLAFDFEWLNRQLFYSAYTRLNSYFADTDLQATGTPSEGELKLLE
PLRAQLDPAVFGPTVTQPDTNPPGSLRANLLKARALLAQAGWTYRDGALRNAKGEPFAFEILDDAGGAMEGVVTAYQRNL
AKLGIVVRFRTADYALLQKRLDAFDYDMTTIRLPGVQVPGAEQYSRYASKFADEPGSDNFIGLKSPAVDALLHALGAAQT
REELLDATHALDRVLMHGYYAVPQWYSTTHRIAYKRTLAYPQTLPLYYSAEGWVVSTWWAKPDH

Sequences:

>Translated_624_residues
MTKGSPRAAAARACLGALRAAGRVAAVLALHAVLAAPAAQAAYAIAQYGEPKYPPGFKHFDYVNPDAPKGGTLVLANPSR
LTSFDKFNPFTMRGNTAPGIDMLFESLATGSSDEPASAYGLLADDIDVAPDRRSVTFHLNPRARFSNGDRVTADDVKFSF
DTLKSKQAAPQFGAYFAEIAKAVVVDPATVRFEFRSANRELPLIAGGVPVFSRKWGLRADGSRIPFDQLAFEQPIGSGPY
VIERYDNGRTITYRRNPAYWGADLPVRVGTNNFERIVYKLYGDGVARLEAFKAGEYDVLVEYIARNWTRRDVGKRFDSGE
LVKREFRQHNGAGMQGFFVNLRRPLFRDVRVRQALDLAFDFEWLNRQLFYSAYTRLNSYFADTDLQATGTPSEGELKLLE
PLRAQLDPAVFGPTVTQPDTNPPGSLRANLLKARALLAQAGWTYRDGALRNAKGEPFAFEILDDAGGAMEGVVTAYQRNL
AKLGIVVRFRTADYALLQKRLDAFDYDMTTIRLPGVQVPGAEQYSRYASKFADEPGSDNFIGLKSPAVDALLHALGAAQT
REELLDATHALDRVLMHGYYAVPQWYSTTHRIAYKRTLAYPQTLPLYYSAEGWVVSTWWAKPDH
>Mature_623_residues
TKGSPRAAAARACLGALRAAGRVAAVLALHAVLAAPAAQAAYAIAQYGEPKYPPGFKHFDYVNPDAPKGGTLVLANPSRL
TSFDKFNPFTMRGNTAPGIDMLFESLATGSSDEPASAYGLLADDIDVAPDRRSVTFHLNPRARFSNGDRVTADDVKFSFD
TLKSKQAAPQFGAYFAEIAKAVVVDPATVRFEFRSANRELPLIAGGVPVFSRKWGLRADGSRIPFDQLAFEQPIGSGPYV
IERYDNGRTITYRRNPAYWGADLPVRVGTNNFERIVYKLYGDGVARLEAFKAGEYDVLVEYIARNWTRRDVGKRFDSGEL
VKREFRQHNGAGMQGFFVNLRRPLFRDVRVRQALDLAFDFEWLNRQLFYSAYTRLNSYFADTDLQATGTPSEGELKLLEP
LRAQLDPAVFGPTVTQPDTNPPGSLRANLLKARALLAQAGWTYRDGALRNAKGEPFAFEILDDAGGAMEGVVTAYQRNLA
KLGIVVRFRTADYALLQKRLDAFDYDMTTIRLPGVQVPGAEQYSRYASKFADEPGSDNFIGLKSPAVDALLHALGAAQTR
EELLDATHALDRVLMHGYYAVPQWYSTTHRIAYKRTLAYPQTLPLYYSAEGWVVSTWWAKPDH

Specific function: Unknown

COG id: COG4166

COG function: function code E; ABC-type oligopeptide transport system, periplasmic component

Gene ontology:

Cell location: Periplasm (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the bacterial solute-binding protein 5 family [H]

Homologues:

Organism=Escherichia coli, GI87082063, Length=589, Percent_Identity=38.0305602716469, Blast_Score=369, Evalue=1e-103,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000914 [H]

Pfam domain/function: PF00496 SBP_bac_5 [H]

EC number: NA

Molecular weight: Translated: 69165; Mature: 69034

Theoretical pI: Translated: 9.34; Mature: 9.34

Prosite motif: PS01310 FXYD

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
1.3 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
1.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTKGSPRAAAARACLGALRAAGRVAAVLALHAVLAAPAAQAAYAIAQYGEPKYPPGFKHF
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCCCCCCCCC
DYVNPDAPKGGTLVLANPSRLTSFDKFNPFTMRGNTAPGIDMLFESLATGSSDEPASAYG
CCCCCCCCCCCEEEEECCHHHCCCCCCCCEEECCCCCCCHHHHHHHHHCCCCCCCCHHHC
LLADDIDVAPDRRSVTFHLNPRARFSNGDRVTADDVKFSFDTLKSKQAAPQFGAYFAEIA
EEECCCCCCCCCCEEEEEECCCCCCCCCCEEECCCCEEHHHHHHHHCCCCHHHHHHHHHH
KAVVVDPATVRFEFRSANRELPLIAGGVPVFSRKWGLRADGSRIPFDQLAFEQPIGSGPY
HHHEECCCEEEEEEECCCCCCCEEECCCCHHHCCCCCCCCCCCCCHHHHHHHCCCCCCCE
VIERYDNGRTITYRRNPAYWGADLPVRVGTNNFERIVYKLYGDGVARLEAFKAGEYDVLV
EEEEECCCCEEEEECCCCCCCCCCEEEECCCHHHHHHHHHHCCCHHHHHHHCCCCHHHHH
EYIARNWTRRDVGKRFDSGELVKREFRQHNGAGMQGFFVNLRRPLFRDVRVRQALDLAFD
HHHHCCCHHHHHHCCCCCCHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
FEWLNRQLFYSAYTRLNSYFADTDLQATGTPSEGELKLLEPLRAQLDPAVFGPTVTQPDT
HHHHHHHHHHHHHHHHHHHHCCCCCEECCCCCCCCCHHHHHHHHHCCCHHCCCCCCCCCC
NPPGSLRANLLKARALLAQAGWTYRDGALRNAKGEPFAFEILDDAGGAMEGVVTAYQRNL
CCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEEECCCCCHHHHHHHHHHHHH
AKLGIVVRFRTADYALLQKRLDAFDYDMTTIRLPGVQVPGAEQYSRYASKFADEPGSDNF
HHEEEEEEEECCHHHHHHHHHHHHCCCCEEEEECCCCCCCHHHHHHHHHHHCCCCCCCCE
IGLKSPAVDALLHALGAAQTREELLDATHALDRVLMHGYYAVPQWYSTTHRIAYKRTLAY
EECCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCEEECCCHHCHHHHHHHHHHHCC
PQTLPLYYSAEGWVVSTWWAKPDH
CCCCCEEECCCCCEEEEECCCCCC
>Mature Secondary Structure 
TKGSPRAAAARACLGALRAAGRVAAVLALHAVLAAPAAQAAYAIAQYGEPKYPPGFKHF
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCCCCCCCCC
DYVNPDAPKGGTLVLANPSRLTSFDKFNPFTMRGNTAPGIDMLFESLATGSSDEPASAYG
CCCCCCCCCCCEEEEECCHHHCCCCCCCCEEECCCCCCCHHHHHHHHHCCCCCCCCHHHC
LLADDIDVAPDRRSVTFHLNPRARFSNGDRVTADDVKFSFDTLKSKQAAPQFGAYFAEIA
EEECCCCCCCCCCEEEEEECCCCCCCCCCEEECCCCEEHHHHHHHHCCCCHHHHHHHHHH
KAVVVDPATVRFEFRSANRELPLIAGGVPVFSRKWGLRADGSRIPFDQLAFEQPIGSGPY
HHHEECCCEEEEEEECCCCCCCEEECCCCHHHCCCCCCCCCCCCCHHHHHHHCCCCCCCE
VIERYDNGRTITYRRNPAYWGADLPVRVGTNNFERIVYKLYGDGVARLEAFKAGEYDVLV
EEEEECCCCEEEEECCCCCCCCCCEEEECCCHHHHHHHHHHCCCHHHHHHHCCCCHHHHH
EYIARNWTRRDVGKRFDSGELVKREFRQHNGAGMQGFFVNLRRPLFRDVRVRQALDLAFD
HHHHCCCHHHHHHCCCCCCHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
FEWLNRQLFYSAYTRLNSYFADTDLQATGTPSEGELKLLEPLRAQLDPAVFGPTVTQPDT
HHHHHHHHHHHHHHHHHHHHCCCCCEECCCCCCCCCHHHHHHHHHCCCHHCCCCCCCCCC
NPPGSLRANLLKARALLAQAGWTYRDGALRNAKGEPFAFEILDDAGGAMEGVVTAYQRNL
CCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEEECCCCCHHHHHHHHHHHHH
AKLGIVVRFRTADYALLQKRLDAFDYDMTTIRLPGVQVPGAEQYSRYASKFADEPGSDNF
HHEEEEEEEECCHHHHHHHHHHHHCCCCEEEEECCCCCCCHHHHHHHHHHHCCCCCCCCE
IGLKSPAVDALLHALGAAQTREELLDATHALDRVLMHGYYAVPQWYSTTHRIAYKRTLAY
EECCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCEEECCCHHCHHHHHHHHHHHCC
PQTLPLYYSAEGWVVSTWWAKPDH
CCCCCEEECCCCCEEEEECCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: ATP; oligopeptides [Periplasm]; H2O [C]

Specific reaction: ATP + oligopeptides [Periplasm] + H2O = ADP + phosphate + oligopeptides [Cytoplasm] [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA