| Definition | Burkholderia cenocepacia HI2424 chromosome 1, complete sequence. |
|---|---|
| Accession | NC_008542 |
| Length | 3,483,902 |
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The map label for this gene is 116690067
Identifier: 116690067
GI number: 116690067
Start: 2270035
End: 2270304
Strand: Direct
Name: 116690067
Synonym: Bcen2424_2046
Alternate gene names: NA
Gene position: 2270035-2270304 (Clockwise)
Preceding gene: 116690062
Following gene: 116690068
Centisome position: 65.16
GC content: 61.85
Gene sequence:
>270_bases ATGAGCGAACTCACCGCCCAATTCGACCAGGCCCAGATCGACGTCAAGCAACTGACGGAGCGGCCGGGCAACCTGACCCT GCTGCGCCTGTACGCGCTCTTCAAGCAGGCGACCGACGGTGATGCGCACGGCGACAAGCCGGGCTTCACCGACATCGTCG GCAAATACAAGTACGATGCCTGGGAAGCGCTGAAGGGCACGTCGCAGGATGCGGCGAAGCAGCAGTACATCGAACTCGTC GAATCGCTGAAAAACGGCACGGCGTCCTGA
Upstream 100 bases:
>100_bases GCGCGGGCGGCGCCGGCGGCGGTTTGGAAGGATCGCTCGACCCCGCGCGACGGCCCGCTTGTTAAGATCGGCCGATTTGA AACCCTTACGGAGACACCCG
Downstream 100 bases:
>100_bases CGGAATCGACGCCGCCGCAATCGGCAATCAAATCAGTGGCGCAGCGCAGCAAATTTCTTTATAATGCGGCCTGCGTCACC TCCCGCGCTCGGCTCGCAAG
Product: acyl-CoA-binding protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 89; Mature: 88
Protein sequence:
>89_residues MSELTAQFDQAQIDVKQLTERPGNLTLLRLYALFKQATDGDAHGDKPGFTDIVGKYKYDAWEALKGTSQDAAKQQYIELV ESLKNGTAS
Sequences:
>Translated_89_residues MSELTAQFDQAQIDVKQLTERPGNLTLLRLYALFKQATDGDAHGDKPGFTDIVGKYKYDAWEALKGTSQDAAKQQYIELV ESLKNGTAS >Mature_88_residues SELTAQFDQAQIDVKQLTERPGNLTLLRLYALFKQATDGDAHGDKPGFTDIVGKYKYDAWEALKGTSQDAAKQQYIELVE SLKNGTAS
Specific function: Unknown
COG id: COG4281
COG function: function code I; Acyl-CoA-binding protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Homo sapiens, GI120433590, Length=79, Percent_Identity=44.3037974683544, Blast_Score=74, Evalue=2e-14, Organism=Homo sapiens, GI120433593, Length=79, Percent_Identity=44.3037974683544, Blast_Score=74, Evalue=2e-14, Organism=Homo sapiens, GI260274832, Length=71, Percent_Identity=45.0704225352113, Blast_Score=70, Evalue=4e-13, Organism=Homo sapiens, GI45643119, Length=71, Percent_Identity=45.0704225352113, Blast_Score=69, Evalue=6e-13, Organism=Homo sapiens, GI260275230, Length=71, Percent_Identity=45.0704225352113, Blast_Score=69, Evalue=6e-13, Organism=Homo sapiens, GI295842534, Length=70, Percent_Identity=45.7142857142857, Blast_Score=68, Evalue=1e-12, Organism=Homo sapiens, GI295842514, Length=70, Percent_Identity=45.7142857142857, Blast_Score=68, Evalue=2e-12, Organism=Homo sapiens, GI295849279, Length=70, Percent_Identity=45.7142857142857, Blast_Score=67, Evalue=2e-12, Organism=Homo sapiens, GI10140853, Length=70, Percent_Identity=45.7142857142857, Blast_Score=67, Evalue=2e-12, Organism=Homo sapiens, GI295849266, Length=70, Percent_Identity=45.7142857142857, Blast_Score=67, Evalue=3e-12, Organism=Homo sapiens, GI89886362, Length=82, Percent_Identity=43.9024390243902, Blast_Score=62, Evalue=9e-11, Organism=Caenorhabditis elegans, GI17535521, Length=84, Percent_Identity=51.1904761904762, Blast_Score=86, Evalue=3e-18, Organism=Caenorhabditis elegans, GI17506027, Length=80, Percent_Identity=50, Blast_Score=78, Evalue=9e-16, Organism=Saccharomyces cerevisiae, GI6321474, Length=76, Percent_Identity=46.0526315789474, Blast_Score=72, Evalue=1e-14, Organism=Drosophila melanogaster, GI24582714, Length=83, Percent_Identity=51.8072289156626, Blast_Score=80, Evalue=2e-16, Organism=Drosophila melanogaster, GI24659809, Length=80, Percent_Identity=50, Blast_Score=79, Evalue=4e-16, Organism=Drosophila melanogaster, GI24659814, Length=80, Percent_Identity=50, Blast_Score=79, Evalue=4e-16, Organism=Drosophila melanogaster, GI21357027, Length=74, Percent_Identity=44.5945945945946, Blast_Score=69, Evalue=5e-13, Organism=Drosophila melanogaster, GI24659804, Length=74, Percent_Identity=40.5405405405405, Blast_Score=63, Evalue=3e-11, Organism=Drosophila melanogaster, GI281365751, Length=74, Percent_Identity=40.5405405405405, Blast_Score=63, Evalue=3e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 9853; Mature: 9722
Theoretical pI: Translated: 4.74; Mature: 4.74
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 1.1 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 0.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSELTAQFDQAQIDVKQLTERPGNLTLLRLYALFKQATDGDAHGDKPGFTDIVGKYKYDA CCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHCHHH WEALKGTSQDAAKQQYIELVESLKNGTAS HHHHCCCCHHHHHHHHHHHHHHHHCCCCC >Mature Secondary Structure SELTAQFDQAQIDVKQLTERPGNLTLLRLYALFKQATDGDAHGDKPGFTDIVGKYKYDA CCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHCHHH WEALKGTSQDAAKQQYIELVESLKNGTAS HHHHCCCCHHHHHHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA