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The map label for this gene is tsf [H]

Identifier: 116690039

GI number: 116690039

Start: 2234580

End: 2235461

Strand: Reverse

Name: tsf [H]

Synonym: Bcen2424_2018

Alternate gene names: 116690039

Gene position: 2235461-2234580 (Counterclockwise)

Preceding gene: 116690040

Following gene: 116690038

Centisome position: 64.17

GC content: 63.72

Gene sequence:

>882_bases
ATGGCGGCAATTACCGCAAGCATGGTGGCAGAACTGCGCGCAAAGACCGACGCACCGATGATGGAGTGCAAGAAGGCGCT
GACGGAAGCCGACGGCGATCTGGCCAAGGCTGAAGAACTGCTGCGCGTCAAGCTCGGCAACAAGGCGAGCAAGGCCGCAT
CGCGCGTGACGGCAGAAGGCGTCGTCGCATCGTTCGTCGGCGGCAACGCAGGCGCGCTGGTCGAACTGAACTGCGAAACC
GACTTCGTCGCGAAGAACGACGACTTCCTCGCGTTCTCGAAGACGGTCGCGGAACTCGTCGCGACGCAGAACCCGGCCGA
CGTGGCCGCGCTGTCGGCGCTGCCGCTCGAAGGCTCGACCGTCGACGCAGTGCGTCTGGCGCTGATCGGCAAGATCGGCG
AGAACGTGTCGATCCGCCGTTTCGTCCGTTTCGAAACCGCGAACAAGATCGCCACGTACCTGCACGGCGCGCGTATCGGC
GTGATCGTCGAGTACACGGGTGCGGAAGAGCAGGTCGGCAAGGACGTCGCGATGCACATCGCCGCGATGAAGCCGGTCGC
GTTGTCGTCGGCCGACGTGCCGGCTGAACTGATCGACACGGAACGCCGCGTGGCCGAGCAGAAGGCCGCGGAATCGGGCA
AGCCGGCCGAAATCGTCGCCAAGATGGTCGACGGCAGCGTCCAGAAGTACCTGAAGGAAGTGTCGCTGCTGAACCAGACG
TTCGTGAAGAACGACAAGCAGACGATCGAGCAGATGCTGAAGGCAGCGAATGCGACGGTGCAGAAGTTCGCGCTGTTCGT
CGTCGGCGAAGGCATCGAGAAGCGCCAGGACGACTTCGCCGCCGAAGTGGCCGCGCAAGTCGCAGCAGCAAAGCAGCAGT
AA

Upstream 100 bases:

>100_bases
CCGGACCTGATCGCGCCGAATCGGCGCGGGTCCGGAAACGAATCTCGGCCGTTCGCGTCCAAGCGGGCGGCGTTGTGAAT
ACAGACTCAAGGAGCGAATG

Downstream 100 bases:

>100_bases
GCAGTCAGGCAGCATCCGCGGCGGGCGTCCGCTCCGCCGCGGCCGGCGGCGCCGCCGGCCGGCCGGGAACCCCGGTCCGG
TCGTCGGCGCTTGCCCGAAT

Product: elongation factor Ts

Products: NA

Alternate protein names: EF-Ts [H]

Number of amino acids: Translated: 293; Mature: 292

Protein sequence:

>293_residues
MAAITASMVAELRAKTDAPMMECKKALTEADGDLAKAEELLRVKLGNKASKAASRVTAEGVVASFVGGNAGALVELNCET
DFVAKNDDFLAFSKTVAELVATQNPADVAALSALPLEGSTVDAVRLALIGKIGENVSIRRFVRFETANKIATYLHGARIG
VIVEYTGAEEQVGKDVAMHIAAMKPVALSSADVPAELIDTERRVAEQKAAESGKPAEIVAKMVDGSVQKYLKEVSLLNQT
FVKNDKQTIEQMLKAANATVQKFALFVVGEGIEKRQDDFAAEVAAQVAAAKQQ

Sequences:

>Translated_293_residues
MAAITASMVAELRAKTDAPMMECKKALTEADGDLAKAEELLRVKLGNKASKAASRVTAEGVVASFVGGNAGALVELNCET
DFVAKNDDFLAFSKTVAELVATQNPADVAALSALPLEGSTVDAVRLALIGKIGENVSIRRFVRFETANKIATYLHGARIG
VIVEYTGAEEQVGKDVAMHIAAMKPVALSSADVPAELIDTERRVAEQKAAESGKPAEIVAKMVDGSVQKYLKEVSLLNQT
FVKNDKQTIEQMLKAANATVQKFALFVVGEGIEKRQDDFAAEVAAQVAAAKQQ
>Mature_292_residues
AAITASMVAELRAKTDAPMMECKKALTEADGDLAKAEELLRVKLGNKASKAASRVTAEGVVASFVGGNAGALVELNCETD
FVAKNDDFLAFSKTVAELVATQNPADVAALSALPLEGSTVDAVRLALIGKIGENVSIRRFVRFETANKIATYLHGARIGV
IVEYTGAEEQVGKDVAMHIAAMKPVALSSADVPAELIDTERRVAEQKAAESGKPAEIVAKMVDGSVQKYLKEVSLLNQTF
VKNDKQTIEQMLKAANATVQKFALFVVGEGIEKRQDDFAAEVAAQVAAAKQQ

Specific function: Associates with the EF-Tu.GDP complex and induces the exchange of GDP to GTP. It remains bound to the aminoacyl-tRNA.EF- Tu.GTP complex up to the GTP hydrolysis stage on the ribosome [H]

COG id: COG0264

COG function: function code J; Translation elongation factor Ts

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the EF-Ts family [H]

Homologues:

Organism=Homo sapiens, GI171846268, Length=231, Percent_Identity=31.6017316017316, Blast_Score=99, Evalue=6e-21,
Organism=Homo sapiens, GI291084500, Length=252, Percent_Identity=29.7619047619048, Blast_Score=92, Evalue=7e-19,
Organism=Homo sapiens, GI291084498, Length=100, Percent_Identity=39, Blast_Score=68, Evalue=1e-11,
Organism=Homo sapiens, GI291084502, Length=159, Percent_Identity=33.3333333333333, Blast_Score=67, Evalue=1e-11,
Organism=Escherichia coli, GI1786366, Length=285, Percent_Identity=47.719298245614, Blast_Score=237, Evalue=7e-64,
Organism=Caenorhabditis elegans, GI17561440, Length=295, Percent_Identity=27.4576271186441, Blast_Score=84, Evalue=7e-17,
Organism=Drosophila melanogaster, GI19921466, Length=292, Percent_Identity=32.8767123287671, Blast_Score=109, Evalue=2e-24,

Paralogues:

None

Copy number: 2670 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 1100 Molecules/Cell In: Stationary-Phase, Rich-Media (Based on E. coli). 4173 Molecules/Cell In: Growth Phase, Glucose-minimal MOPS Media. 14563 Molecules/Cell In: Growth Phase, Gluco

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001816
- InterPro:   IPR014039
- InterPro:   IPR018101
- InterPro:   IPR009060
- InterPro:   IPR000449 [H]

Pfam domain/function: PF00889 EF_TS; PF00627 UBA [H]

EC number: NA

Molecular weight: Translated: 31038; Mature: 30907

Theoretical pI: Translated: 5.12; Mature: 5.12

Prosite motif: PS01127 EF_TS_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAAITASMVAELRAKTDAPMMECKKALTEADGDLAKAEELLRVKLGNKASKAASRVTAEG
CCCHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHH
VVASFVGGNAGALVELNCETDFVAKNDDFLAFSKTVAELVATQNPADVAALSALPLEGST
HHHHHHCCCCCEEEEEECCCCEEECCCCHHHHHHHHHHHHHCCCCHHHHHHHHCCCCCCH
VDAVRLALIGKIGENVSIRRFVRFETANKIATYLHGARIGVIVEYTGAEEQVGKDVAMHI
HHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCEEEEEEEECCCHHHHHHHHHHHH
AAMKPVALSSADVPAELIDTERRVAEQKAAESGKPAEIVAKMVDGSVQKYLKEVSLLNQT
HHHCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
FVKNDKQTIEQMLKAANATVQKFALFVVGEGIEKRQDDFAAEVAAQVAAAKQQ
HHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
AAITASMVAELRAKTDAPMMECKKALTEADGDLAKAEELLRVKLGNKASKAASRVTAEG
CCHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHH
VVASFVGGNAGALVELNCETDFVAKNDDFLAFSKTVAELVATQNPADVAALSALPLEGST
HHHHHHCCCCCEEEEEECCCCEEECCCCHHHHHHHHHHHHHCCCCHHHHHHHHCCCCCCH
VDAVRLALIGKIGENVSIRRFVRFETANKIATYLHGARIGVIVEYTGAEEQVGKDVAMHI
HHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCEEEEEEEECCCHHHHHHHHHHHH
AAMKPVALSSADVPAELIDTERRVAEQKAAESGKPAEIVAKMVDGSVQKYLKEVSLLNQT
HHHCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
FVKNDKQTIEQMLKAANATVQKFALFVVGEGIEKRQDDFAAEVAAQVAAAKQQ
HHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA