| Definition | Burkholderia cenocepacia HI2424 chromosome 1, complete sequence. |
|---|---|
| Accession | NC_008542 |
| Length | 3,483,902 |
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The map label for this gene is qmcA [H]
Identifier: 116690021
GI number: 116690021
Start: 2215330
End: 2216265
Strand: Reverse
Name: qmcA [H]
Synonym: Bcen2424_2000
Alternate gene names: 116690021
Gene position: 2216265-2215330 (Counterclockwise)
Preceding gene: 116690022
Following gene: 116690019
Centisome position: 63.61
GC content: 63.89
Gene sequence:
>936_bases ATGGATTCGCTGATCATCTGGGTTGTCCTGCTCGTCATCGCGATCGTGATCGTGTCGAAGACGGTGAAGATCGTGCCGCA GCAGCATGCATGGGTGCTCGAGCGCTTCGGGCGCTACCACGCGACGCTGTCGCCCGGTCTCAATATCGTGCTGCCGTTCG TCGATCGCATCGCGTACCGGCACGTGCTGAAGGAAATTCCGCTCGACGTGCCGAGTCAGGTCTGTATCACGCGCGACAAC ACGCAGTTGCAGGTCGACGGCGTGCTGTATTTCCAGGTGATGGACCCGATGAAGGCGTCGTACGGGTCGAGCAACTTCGT GCTCGCGATCACGCAGCTGTCGCAGACGATGCTGCGCTCGGTGATCGGCAAGCTCGAGCTCGACAAGACCTTCGAGGAGC GCGATTTCATCAACCACAGCATCGTGTCGGCGCTCGACGACGCCGCGGCGAACTGGGGCGTGAAAGTGCTGCGCTACGAG ATCAAGGACCTGACGCCGCCGAAGGAGATCCTGCATGCGATGCAGGCGCAGATCACCGCGGAGCGCGAAAAGCGTGCGCT GATCGCCGCATCCGAAGGCCGCAAGCAGGAGCAGATCAACCTCGCGTCGGGGGCGCGCGAAGCCGCGATCCAGAAGTCGG AAGGCGAGCGGCAGGCCGCGATCAACCAGGCGCAGGGCGAAGCCGCCGCGATTCTGGCGGTGGCCGAGGCGAACGCGCAG GCGATCCAGAAAATCGCGAGCGCGATCCAGTCGCAAGGCGGGATGGACGCGGTGAACCTGAAGGTCGCCGAGCAGTATGT CGGTGCGTTCGCGAATCTCGCGAAGCAGGGCAATACGCTGATCGTGCCGTCGAACCTGTCGGATCTCGGTACCGCGATCT CGTCGGCGCTGACGATCGTCAAGAGCGCGGGCGTGGGGGCCGGCGCGAAGAGCTGA
Upstream 100 bases:
>100_bases CGTGTACCAGGTGAGCGCCGTGCGCGGCAATTGCCTCGTGGTCGTGGCGAAACCCGCGGGCTGATCGTCCGCTGATACAA CAACAAGGAGGAAATGCTTC
Downstream 100 bases:
>100_bases GCCCGACATCGATGCGCACGCAGCTGCCGCGTGCGTATCGTCCTGCGGCGAATCGTCGCGCAGCCGCGACCGGCCGGCGC GATTCAGGCAGTCCAAAGCG
Product: band 7 protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 311; Mature: 311
Protein sequence:
>311_residues MDSLIIWVVLLVIAIVIVSKTVKIVPQQHAWVLERFGRYHATLSPGLNIVLPFVDRIAYRHVLKEIPLDVPSQVCITRDN TQLQVDGVLYFQVMDPMKASYGSSNFVLAITQLSQTMLRSVIGKLELDKTFEERDFINHSIVSALDDAAANWGVKVLRYE IKDLTPPKEILHAMQAQITAEREKRALIAASEGRKQEQINLASGAREAAIQKSEGERQAAINQAQGEAAAILAVAEANAQ AIQKIASAIQSQGGMDAVNLKVAEQYVGAFANLAKQGNTLIVPSNLSDLGTAISSALTIVKSAGVGAGAKS
Sequences:
>Translated_311_residues MDSLIIWVVLLVIAIVIVSKTVKIVPQQHAWVLERFGRYHATLSPGLNIVLPFVDRIAYRHVLKEIPLDVPSQVCITRDN TQLQVDGVLYFQVMDPMKASYGSSNFVLAITQLSQTMLRSVIGKLELDKTFEERDFINHSIVSALDDAAANWGVKVLRYE IKDLTPPKEILHAMQAQITAEREKRALIAASEGRKQEQINLASGAREAAIQKSEGERQAAINQAQGEAAAILAVAEANAQ AIQKIASAIQSQGGMDAVNLKVAEQYVGAFANLAKQGNTLIVPSNLSDLGTAISSALTIVKSAGVGAGAKS >Mature_311_residues MDSLIIWVVLLVIAIVIVSKTVKIVPQQHAWVLERFGRYHATLSPGLNIVLPFVDRIAYRHVLKEIPLDVPSQVCITRDN TQLQVDGVLYFQVMDPMKASYGSSNFVLAITQLSQTMLRSVIGKLELDKTFEERDFINHSIVSALDDAAANWGVKVLRYE IKDLTPPKEILHAMQAQITAEREKRALIAASEGRKQEQINLASGAREAAIQKSEGERQAAINQAQGEAAAILAVAEANAQ AIQKIASAIQSQGGMDAVNLKVAEQYVGAFANLAKQGNTLIVPSNLSDLGTAISSALTIVKSAGVGAGAKS
Specific function: Unknown
COG id: COG0330
COG function: function code O; Membrane protease subunits, stomatin/prohibitin homologs
Gene ontology:
Cell location: Membrane; Single-pass membrane protein (Potential) [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the band 7/mec-2 family [H]
Homologues:
Organism=Homo sapiens, GI7305503, Length=278, Percent_Identity=51.0791366906475, Blast_Score=276, Evalue=2e-74, Organism=Homo sapiens, GI221316744, Length=200, Percent_Identity=35.5, Blast_Score=97, Evalue=2e-20, Organism=Homo sapiens, GI21686995, Length=200, Percent_Identity=35.5, Blast_Score=97, Evalue=2e-20, Organism=Homo sapiens, GI38016911, Length=214, Percent_Identity=33.1775700934579, Blast_Score=93, Evalue=3e-19, Organism=Escherichia coli, GI1786697, Length=303, Percent_Identity=41.9141914191419, Blast_Score=237, Evalue=8e-64, Organism=Escherichia coli, GI1790616, Length=203, Percent_Identity=25.615763546798, Blast_Score=62, Evalue=5e-11, Organism=Caenorhabditis elegans, GI32564147, Length=284, Percent_Identity=48.943661971831, Blast_Score=289, Evalue=1e-78, Organism=Caenorhabditis elegans, GI17569493, Length=293, Percent_Identity=29.0102389078498, Blast_Score=105, Evalue=3e-23, Organism=Caenorhabditis elegans, GI17569497, Length=206, Percent_Identity=32.5242718446602, Blast_Score=103, Evalue=8e-23, Organism=Caenorhabditis elegans, GI193209764, Length=214, Percent_Identity=31.7757009345794, Blast_Score=103, Evalue=1e-22, Organism=Caenorhabditis elegans, GI71989948, Length=155, Percent_Identity=34.8387096774194, Blast_Score=89, Evalue=3e-18, Organism=Caenorhabditis elegans, GI71989955, Length=156, Percent_Identity=34.6153846153846, Blast_Score=89, Evalue=3e-18, Organism=Caenorhabditis elegans, GI193210507, Length=193, Percent_Identity=30.0518134715026, Blast_Score=88, Evalue=5e-18, Organism=Caenorhabditis elegans, GI17570161, Length=193, Percent_Identity=30.0518134715026, Blast_Score=88, Evalue=6e-18, Organism=Caenorhabditis elegans, GI71987612, Length=167, Percent_Identity=29.940119760479, Blast_Score=85, Evalue=6e-17, Organism=Caenorhabditis elegans, GI25153583, Length=167, Percent_Identity=29.940119760479, Blast_Score=84, Evalue=1e-16, Organism=Caenorhabditis elegans, GI17570459, Length=206, Percent_Identity=30.0970873786408, Blast_Score=82, Evalue=3e-16, Organism=Caenorhabditis elegans, GI71987621, Length=173, Percent_Identity=28.9017341040462, Blast_Score=82, Evalue=4e-16, Organism=Caenorhabditis elegans, GI17569499, Length=209, Percent_Identity=28.7081339712919, Blast_Score=80, Evalue=1e-15, Organism=Caenorhabditis elegans, GI32566490, Length=164, Percent_Identity=29.2682926829268, Blast_Score=79, Evalue=3e-15, Organism=Drosophila melanogaster, GI45550506, Length=282, Percent_Identity=50, Blast_Score=275, Evalue=2e-74, Organism=Drosophila melanogaster, GI45556022, Length=167, Percent_Identity=35.3293413173653, Blast_Score=100, Evalue=1e-21, Organism=Drosophila melanogaster, GI18860517, Length=209, Percent_Identity=32.5358851674641, Blast_Score=98, Evalue=9e-21, Organism=Drosophila melanogaster, GI21356845, Length=190, Percent_Identity=24.7368421052632, Blast_Score=80, Evalue=1e-15, Organism=Drosophila melanogaster, GI281361631, Length=190, Percent_Identity=26.3157894736842, Blast_Score=79, Evalue=4e-15, Organism=Drosophila melanogaster, GI62484448, Length=171, Percent_Identity=33.3333333333333, Blast_Score=79, Evalue=4e-15, Organism=Drosophila melanogaster, GI281361633, Length=190, Percent_Identity=26.3157894736842, Blast_Score=79, Evalue=5e-15, Organism=Drosophila melanogaster, GI281365664, Length=171, Percent_Identity=33.3333333333333, Blast_Score=79, Evalue=5e-15, Organism=Drosophila melanogaster, GI62484274, Length=171, Percent_Identity=33.3333333333333, Blast_Score=78, Evalue=8e-15, Organism=Drosophila melanogaster, GI24657857, Length=171, Percent_Identity=33.3333333333333, Blast_Score=77, Evalue=1e-14, Organism=Drosophila melanogaster, GI28573263, Length=195, Percent_Identity=25.6410256410256, Blast_Score=75, Evalue=5e-14,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001107 - InterPro: IPR018080 - InterPro: IPR001972 [H]
Pfam domain/function: PF01145 Band_7 [H]
EC number: NA
Molecular weight: Translated: 33563; Mature: 33563
Theoretical pI: Translated: 7.72; Mature: 7.72
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDSLIIWVVLLVIAIVIVSKTVKIVPQQHAWVLERFGRYHATLSPGLNIVLPFVDRIAYR CCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHEECCCCCHHHHHHHHHHHHH HVLKEIPLDVPSQVCITRDNTQLQVDGVLYFQVMDPMKASYGSSNFVLAITQLSQTMLRS HHHHHCCCCCCCCEEEECCCCEEEECCEEEEEECCHHHHCCCCCCEEEEHHHHHHHHHHH VIGKLELDKTFEERDFINHSIVSALDDAAANWGVKVLRYEIKDLTPPKEILHAMQAQITA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCHHHHHHHHHHHHHH EREKRALIAASEGRKQEQINLASGAREAAIQKSEGERQAAINQAQGEAAAILAVAEANAQ HHHHHEEEEECCCCCHHHHHHHCCHHHHHHHHCCCHHHHHHHHHCCCCEEEEEEHHCCHH AIQKIASAIQSQGGMDAVNLKVAEQYVGAFANLAKQGNTLIVPSNLSDLGTAISSALTIV HHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCEEEEECCHHHHHHHHHHHHHHH KSAGVGAGAKS HHCCCCCCCCC >Mature Secondary Structure MDSLIIWVVLLVIAIVIVSKTVKIVPQQHAWVLERFGRYHATLSPGLNIVLPFVDRIAYR CCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHEECCCCCHHHHHHHHHHHHH HVLKEIPLDVPSQVCITRDNTQLQVDGVLYFQVMDPMKASYGSSNFVLAITQLSQTMLRS HHHHHCCCCCCCCEEEECCCCEEEECCEEEEEECCHHHHCCCCCCEEEEHHHHHHHHHHH VIGKLELDKTFEERDFINHSIVSALDDAAANWGVKVLRYEIKDLTPPKEILHAMQAQITA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCHHHHHHHHHHHHHH EREKRALIAASEGRKQEQINLASGAREAAIQKSEGERQAAINQAQGEAAAILAVAEANAQ HHHHHEEEEECCCCCHHHHHHHCCHHHHHHHHCCCHHHHHHHHHCCCCEEEEEEHHCCHH AIQKIASAIQSQGGMDAVNLKVAEQYVGAFANLAKQGNTLIVPSNLSDLGTAISSALTIV HHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCEEEEECCHHHHHHHHHHHHHHH KSAGVGAGAKS HHCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 11206551; 11258796 [H]