Definition Burkholderia cenocepacia HI2424 chromosome 1, complete sequence.
Accession NC_008542
Length 3,483,902

Click here to switch to the map view.

The map label for this gene is 116689956

Identifier: 116689956

GI number: 116689956

Start: 2150821

End: 2152041

Strand: Reverse

Name: 116689956

Synonym: Bcen2424_1935

Alternate gene names: NA

Gene position: 2152041-2150821 (Counterclockwise)

Preceding gene: 116689957

Following gene: 116689954

Centisome position: 61.77

GC content: 70.27

Gene sequence:

>1221_bases
ATGAACCGACGTGATTTTCTGACGCTGACGGGCGCCGCGGCGGCGGCCGGTGTGTCGATGTGGCAAGCGCCCGCGATGGC
GGCCGCCGCGACGCAGGCGGGGCGCAAGGCCGCGGCCGGGTATGCGAACGTGCTGATCCTCGTCGAGCTGAAGGGCGGCA
ACGACGGCCTCAACACGGTGGTGCCGTATGCCGACCCGCTGTACTACCAGTTCCGGCGCAGCATCGGCATCAAGCGCGAG
CAGGTGCTGCAGCTCGACGCGCAGACGGGGCTGCACCCGTCGCTCGCGCCGCTGATGCCGCTGTGGCGCGACGGACAGGT
CGCGATCGTGCAGGGTGTCGGCTATCCGCAGCCGAACCTGTCGCATTTCCGTTCGATCGAGATCTGGGACACCGCATCGC
GCTCGGATCAGTACCTGCACGAAGGCTGGCTCACGCGCACGTTCGCGCAGGCGCCCGTGCCGCCCGGTTTCGCCGCGGAC
GGCGTCGTGCTCGGCAGCGCCGAGATGGGACCGCTGTCGAACGGCGCGCGCGCGATCGCACTCGTCAATCCCGCGCAGTT
CATCCGCGCGGCCCGGCTCGCCGAGCCGTCGTCGCTGCGCGAGCAGAACCCGGCGCTCGCGCACATCATCGACGTCGAGA
ACGACATCGTGAAGGCGGCCGACCGGCTGCGCCCGCGCGGCGGGATGCGGGAATTCAGGACGGCCTTTCCGGCTGGCGCG
TTCGGCACGTCGGTCAAGACCGCGATGCAGGTGCTGGCCGCGTGCGAAGCGTCCGGGCCCGGCGCGCAGGATGGGGTCGC
GGTGCTGCGCCTGACGCTCAACGGTTTCGACACACACCAGAACCAGCCGGGGCAGCAGGCCGCGCTGCTCAAGCAGTTCG
CGGAAGGGATGAGCGCGATGCGCGCGGCGTTGATCGAACTCGGGCGCTGGAACGAGACGCTCGTGATGACGTATGCGGAA
TTCGGGCGGCGCGTGCGCGAGAACCAGAGCAACGGCACCGATCACGGCACGGCCGCGCCGCATTTCGTGATGGGCGGCCG
CGTGTCGGGCGGACTGTACGGCGCGCCGCCGGCGCTCGGGCGGCTCGACGGCAACGGCAACCTGCCGGTCGCGGTCGATT
TTCGCCAGCTTTACGCGACCGTGCTTGGGTCCTGGTGGGGGCTCGATGCGACGCGCGTGCTGCAGCAGCGTTTCGACACG
CTGCCGCTGCTGAAGGCGTGA

Upstream 100 bases:

>100_bases
CTGCTGATGGATCCGGCCTATCAACTGAAATGATGCGAACGACGACGAAGCGGACAGTCGCCGCGGCCAACGCGCCGGGC
GGCGAACCAGAGGATGTGCG

Downstream 100 bases:

>100_bases
TGCGGGCCGCTCAGCGGCGACGCGCGGCGCGCCACGCGATCCACAGCTTGCGGATCGGCGTGAGCGCGATGCGCTGGTGC
AGCACCTGGTAGCCGTCGCG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 406; Mature: 406

Protein sequence:

>406_residues
MNRRDFLTLTGAAAAAGVSMWQAPAMAAAATQAGRKAAAGYANVLILVELKGGNDGLNTVVPYADPLYYQFRRSIGIKRE
QVLQLDAQTGLHPSLAPLMPLWRDGQVAIVQGVGYPQPNLSHFRSIEIWDTASRSDQYLHEGWLTRTFAQAPVPPGFAAD
GVVLGSAEMGPLSNGARAIALVNPAQFIRAARLAEPSSLREQNPALAHIIDVENDIVKAADRLRPRGGMREFRTAFPAGA
FGTSVKTAMQVLAACEASGPGAQDGVAVLRLTLNGFDTHQNQPGQQAALLKQFAEGMSAMRAALIELGRWNETLVMTYAE
FGRRVRENQSNGTDHGTAAPHFVMGGRVSGGLYGAPPALGRLDGNGNLPVAVDFRQLYATVLGSWWGLDATRVLQQRFDT
LPLLKA

Sequences:

>Translated_406_residues
MNRRDFLTLTGAAAAAGVSMWQAPAMAAAATQAGRKAAAGYANVLILVELKGGNDGLNTVVPYADPLYYQFRRSIGIKRE
QVLQLDAQTGLHPSLAPLMPLWRDGQVAIVQGVGYPQPNLSHFRSIEIWDTASRSDQYLHEGWLTRTFAQAPVPPGFAAD
GVVLGSAEMGPLSNGARAIALVNPAQFIRAARLAEPSSLREQNPALAHIIDVENDIVKAADRLRPRGGMREFRTAFPAGA
FGTSVKTAMQVLAACEASGPGAQDGVAVLRLTLNGFDTHQNQPGQQAALLKQFAEGMSAMRAALIELGRWNETLVMTYAE
FGRRVRENQSNGTDHGTAAPHFVMGGRVSGGLYGAPPALGRLDGNGNLPVAVDFRQLYATVLGSWWGLDATRVLQQRFDT
LPLLKA
>Mature_406_residues
MNRRDFLTLTGAAAAAGVSMWQAPAMAAAATQAGRKAAAGYANVLILVELKGGNDGLNTVVPYADPLYYQFRRSIGIKRE
QVLQLDAQTGLHPSLAPLMPLWRDGQVAIVQGVGYPQPNLSHFRSIEIWDTASRSDQYLHEGWLTRTFAQAPVPPGFAAD
GVVLGSAEMGPLSNGARAIALVNPAQFIRAARLAEPSSLREQNPALAHIIDVENDIVKAADRLRPRGGMREFRTAFPAGA
FGTSVKTAMQVLAACEASGPGAQDGVAVLRLTLNGFDTHQNQPGQQAALLKQFAEGMSAMRAALIELGRWNETLVMTYAE
FGRRVRENQSNGTDHGTAAPHFVMGGRVSGGLYGAPPALGRLDGNGNLPVAVDFRQLYATVLGSWWGLDATRVLQQRFDT
LPLLKA

Specific function: Unknown

COG id: COG4102

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 43462; Mature: 43462

Theoretical pI: Translated: 9.51; Mature: 9.51

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNRRDFLTLTGAAAAAGVSMWQAPAMAAAATQAGRKAAAGYANVLILVELKGGNDGLNTV
CCCCCEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEEEECCCCCCCCCC
VPYADPLYYQFRRSIGIKREQVLQLDAQTGLHPSLAPLMPLWRDGQVAIVQGVGYPQPNL
CCCCCHHHHHHHHHHCCCHHHHHEEHHHCCCCCCHHHHCCCCCCCCEEEEECCCCCCCCH
SHFRSIEIWDTASRSDQYLHEGWLTRTFAQAPVPPGFAADGVVLGSAEMGPLSNGARAIA
HHHCEEEEECCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCEEECCCCCCCCCCCCEEEE
LVNPAQFIRAARLAEPSSLREQNPALAHIIDVENDIVKAADRLRPRGGMREFRTAFPAGA
EECHHHHHHHHHCCCCHHHHHCCCCEEEEEECCHHHHHHHHHHCCCCCHHHHHHHCCCCC
FGTSVKTAMQVLAACEASGPGAQDGVAVLRLTLNGFDTHQNQPGQQAALLKQFAEGMSAM
CCHHHHHHHHHHHHHCCCCCCCCCCEEEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHH
RAALIELGRWNETLVMTYAEFGRRVRENQSNGTDHGTAAPHFVMGGRVSGGLYGAPPALG
HHHHHHHCCCCCCEEEEHHHHHHHHHHCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCC
RLDGNGNLPVAVDFRQLYATVLGSWWGLDATRVLQQRFDTLPLLKA
EECCCCCCCEEEHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCCC
>Mature Secondary Structure
MNRRDFLTLTGAAAAAGVSMWQAPAMAAAATQAGRKAAAGYANVLILVELKGGNDGLNTV
CCCCCEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEEEECCCCCCCCCC
VPYADPLYYQFRRSIGIKREQVLQLDAQTGLHPSLAPLMPLWRDGQVAIVQGVGYPQPNL
CCCCCHHHHHHHHHHCCCHHHHHEEHHHCCCCCCHHHHCCCCCCCCEEEEECCCCCCCCH
SHFRSIEIWDTASRSDQYLHEGWLTRTFAQAPVPPGFAADGVVLGSAEMGPLSNGARAIA
HHHCEEEEECCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCEEECCCCCCCCCCCCEEEE
LVNPAQFIRAARLAEPSSLREQNPALAHIIDVENDIVKAADRLRPRGGMREFRTAFPAGA
EECHHHHHHHHHCCCCHHHHHCCCCEEEEEECCHHHHHHHHHHCCCCCHHHHHHHCCCCC
FGTSVKTAMQVLAACEASGPGAQDGVAVLRLTLNGFDTHQNQPGQQAALLKQFAEGMSAM
CCHHHHHHHHHHHHHCCCCCCCCCCEEEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHH
RAALIELGRWNETLVMTYAEFGRRVRENQSNGTDHGTAAPHFVMGGRVSGGLYGAPPALG
HHHHHHHCCCCCCEEEEHHHHHHHHHHCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCC
RLDGNGNLPVAVDFRQLYATVLGSWWGLDATRVLQQRFDTLPLLKA
EECCCCCCCEEEHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA