| Definition | Burkholderia cenocepacia HI2424 chromosome 1, complete sequence. |
|---|---|
| Accession | NC_008542 |
| Length | 3,483,902 |
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The map label for this gene is 116689949
Identifier: 116689949
GI number: 116689949
Start: 2143883
End: 2145028
Strand: Reverse
Name: 116689949
Synonym: Bcen2424_1928
Alternate gene names: NA
Gene position: 2145028-2143883 (Counterclockwise)
Preceding gene: 116689954
Following gene: 116689948
Centisome position: 61.57
GC content: 69.9
Gene sequence:
>1146_bases GTGAGGATCACGACGGATATCGGGCAGGATCTCGACGCGCTGCGCGACGTGCCGGCCGCCATCGTCCTCGACGAATTCGC GTGGCCGCCGCGGCCGTCCCGGCGTGCCGATTTCGACGGCGTCGCGCGCGGCGACGCGCCGCGGCGCGAACTCGGGCTGA TGCTGCTCGATCTGTATGCGGTAGCCGCGCAGTCCGCCATCGGCGAATTCGAATGCCGGTTCTTTTCGCTGCTGCAGGCG CTCTTTCCGTTCGATGCCGCGTGGACCGGCGTCGCGACCCACGTGCCGACCGGTCCGGTGATGCACAACAGCTTTTTGTA CCGGTTGCCGCACGCGTTCTTCACCGACTGGAAGCGCGTGCGGGATTGCGATCCGCTCGCGCACCGCACGTTGCACGGCG CGCACGGCCGCGCGGTGCGGCTGACGGTCGTCGAGCCGGGGCTCGATGCGCGGTTTCGCGACTGGTGCGTGAAGTACGGG CTCGCGCAATTGATGTGCGTGTGTACGCTCGATCGCCGCTTCGGCCTGACGACGTTCATGTCGATCTATCGCCAGGGCCT GAACCGGCCGTTCAGCGACGACGACGCGCGGTGTTTCGAGGAAGTGATCCCGCATCTGGCCGCCGCGCTGACGATCAATC GCGCGGCCCAACTCACGCGCGAGCGCGCCGACACGGTCGCGCCGGCGGCGCGTGCGCTGTGCGACAACTTCGGGGTGCTG CACCATGCCGATCACGGTTTCGACGACGTGCTGCGCACCGAATGGCCGTCGTGGGCCGGCGCGCGCGTGCCGGAGCCGCT CGTCGCGCACCTGCGGCGCCAGTCGGGCCAACCGTTCGTCGGCGACGCGCTGCGCATCCAGTGCGTGCCGGTCGCGGGGC TATTCCAGATCGAGGCGCGGCCGCGCTCGCTGCTCGACCGGCTGAGCCCGCGCGAACTCGCGGCGATCCGCTATTACGGC GCCGGGCGTTCGCACAAGGAGGTCGCGCAGCAGATGGCGATCTCGCCGACGACCGTGCGTCACTACCTGCGCTGCGCGTA CCGCAAGCTCGGCATGCACGACAAGAGCCAGATCGCCGGCGTGCTGGGCGCGACGGGTGGCGCGACCGACGACGAGGCGA TGGAAGCCGGCAGCATGCCGCGCTGA
Upstream 100 bases:
>100_bases GCGAGCGTTCCGGCGCCGTGGCCCGCCAAAAAAGCTGCTGGCTATAATCGGCCGGTGTCGTTGCGCATATCGGCAGCCCG ACCGGGCAGGGGAGCGGAAA
Downstream 100 bases:
>100_bases GGCCCACGAACGCACGAACGGATACGGCGCGATGCGCATTGCGTTGCCGGATTGGTTGTGTCCGCAACCATTGAGCGTTA TGCTCGTCAGCTTCCAGGAG
Product: LuxR family transcriptional regulator
Products: NA
Alternate protein names: Transcriptional Regulator LuxR Family; GerE Family Transcriptional Regulator; LuxR Superfamily Regulatory Protein; Transcriptional Regulator; Regulatory Protein LuxR; Response Regulator
Number of amino acids: Translated: 381; Mature: 381
Protein sequence:
>381_residues MRITTDIGQDLDALRDVPAAIVLDEFAWPPRPSRRADFDGVARGDAPRRELGLMLLDLYAVAAQSAIGEFECRFFSLLQA LFPFDAAWTGVATHVPTGPVMHNSFLYRLPHAFFTDWKRVRDCDPLAHRTLHGAHGRAVRLTVVEPGLDARFRDWCVKYG LAQLMCVCTLDRRFGLTTFMSIYRQGLNRPFSDDDARCFEEVIPHLAAALTINRAAQLTRERADTVAPAARALCDNFGVL HHADHGFDDVLRTEWPSWAGARVPEPLVAHLRRQSGQPFVGDALRIQCVPVAGLFQIEARPRSLLDRLSPRELAAIRYYG AGRSHKEVAQQMAISPTTVRHYLRCAYRKLGMHDKSQIAGVLGATGGATDDEAMEAGSMPR
Sequences:
>Translated_381_residues MRITTDIGQDLDALRDVPAAIVLDEFAWPPRPSRRADFDGVARGDAPRRELGLMLLDLYAVAAQSAIGEFECRFFSLLQA LFPFDAAWTGVATHVPTGPVMHNSFLYRLPHAFFTDWKRVRDCDPLAHRTLHGAHGRAVRLTVVEPGLDARFRDWCVKYG LAQLMCVCTLDRRFGLTTFMSIYRQGLNRPFSDDDARCFEEVIPHLAAALTINRAAQLTRERADTVAPAARALCDNFGVL HHADHGFDDVLRTEWPSWAGARVPEPLVAHLRRQSGQPFVGDALRIQCVPVAGLFQIEARPRSLLDRLSPRELAAIRYYG AGRSHKEVAQQMAISPTTVRHYLRCAYRKLGMHDKSQIAGVLGATGGATDDEAMEAGSMPR >Mature_381_residues MRITTDIGQDLDALRDVPAAIVLDEFAWPPRPSRRADFDGVARGDAPRRELGLMLLDLYAVAAQSAIGEFECRFFSLLQA LFPFDAAWTGVATHVPTGPVMHNSFLYRLPHAFFTDWKRVRDCDPLAHRTLHGAHGRAVRLTVVEPGLDARFRDWCVKYG LAQLMCVCTLDRRFGLTTFMSIYRQGLNRPFSDDDARCFEEVIPHLAAALTINRAAQLTRERADTVAPAARALCDNFGVL HHADHGFDDVLRTEWPSWAGARVPEPLVAHLRRQSGQPFVGDALRIQCVPVAGLFQIEARPRSLLDRLSPRELAAIRYYG AGRSHKEVAQQMAISPTTVRHYLRCAYRKLGMHDKSQIAGVLGATGGATDDEAMEAGSMPR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 42425; Mature: 42425
Theoretical pI: Translated: 8.00; Mature: 8.00
Prosite motif: PS50043 HTH_LUXR_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.4 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 4.7 %Cys+Met (Translated Protein) 2.4 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 4.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRITTDIGQDLDALRDVPAAIVLDEFAWPPRPSRRADFDGVARGDAPRRELGLMLLDLYA CCCCCHHHHHHHHHHCCCHHHHHHHCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHH VAAQSAIGEFECRFFSLLQALFPFDAAWTGVATHVPTGPVMHNSFLYRLPHAFFTDWKRV HHHHHHHHHHHHHHHHHHHHHCCCCHHHCCCHHCCCCCCHHHHHHHHHHHHHHHHHHHHH RDCDPLAHRTLHGAHGRAVRLTVVEPGLDARFRDWCVKYGLAQLMCVCTLDRRFGLTTFM HCCCHHHHHHHCCCCCCEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHH SIYRQGLNRPFSDDDARCFEEVIPHLAAALTINRAAQLTRERADTVAPAARALCDNFGVL HHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCH HHADHGFDDVLRTEWPSWAGARVPEPLVAHLRRQSGQPFVGDALRIQCVPVAGLFQIEAR HCCCCCHHHHHHHCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCEEEEEEEECCEEEECCC PRSLLDRLSPRELAAIRYYGAGRSHKEVAQQMAISPTTVRHYLRCAYRKLGMHDKSQIAG HHHHHHCCCHHHHHHHEEECCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCHHHHHH VLGATGGATDDEAMEAGSMPR HHHCCCCCCCHHHHHCCCCCC >Mature Secondary Structure MRITTDIGQDLDALRDVPAAIVLDEFAWPPRPSRRADFDGVARGDAPRRELGLMLLDLYA CCCCCHHHHHHHHHHCCCHHHHHHHCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHH VAAQSAIGEFECRFFSLLQALFPFDAAWTGVATHVPTGPVMHNSFLYRLPHAFFTDWKRV HHHHHHHHHHHHHHHHHHHHHCCCCHHHCCCHHCCCCCCHHHHHHHHHHHHHHHHHHHHH RDCDPLAHRTLHGAHGRAVRLTVVEPGLDARFRDWCVKYGLAQLMCVCTLDRRFGLTTFM HCCCHHHHHHHCCCCCCEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHH SIYRQGLNRPFSDDDARCFEEVIPHLAAALTINRAAQLTRERADTVAPAARALCDNFGVL HHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCH HHADHGFDDVLRTEWPSWAGARVPEPLVAHLRRQSGQPFVGDALRIQCVPVAGLFQIEAR HCCCCCHHHHHHHCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCEEEEEEEECCEEEECCC PRSLLDRLSPRELAAIRYYGAGRSHKEVAQQMAISPTTVRHYLRCAYRKLGMHDKSQIAG HHHHHHCCCHHHHHHHEEECCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCHHHHHH VLGATGGATDDEAMEAGSMPR HHHCCCCCCCHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA