Definition Burkholderia cenocepacia HI2424 chromosome 1, complete sequence.
Accession NC_008542
Length 3,483,902

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The map label for this gene is 116689390

Identifier: 116689390

GI number: 116689390

Start: 1506433

End: 1507818

Strand: Direct

Name: 116689390

Synonym: Bcen2424_1368

Alternate gene names: NA

Gene position: 1506433-1507818 (Clockwise)

Preceding gene: 116689389

Following gene: 116689391

Centisome position: 43.24

GC content: 71.28

Gene sequence:

>1386_bases
ATGCGCTCGCCGGATGACGGTACGGACATGACAGCAAAGCAACCTGAACGGCGCGTGCGCATCGGTGCGGGCGCCGGCTA
CTCGGGCGACCGGATCGAGCCCGCGGTCGAACTGGCCGAACACGGGCAACTCGACTACCTGGTCTTCGAATGCCTGGCCG
AGCGCACGATCGCGATCGCGCAGCAGGCGCGCCGCAACGATCCGGCGCTCGGCTACGATCCGCTGCTCGACGCGCGGATG
CAGGCGGTGCTGCCGGTCGCGGCGGTAAAGCGCGTGCGCATCGTGTCGAACATGGGCGCGGCGAATCCGCGCGCGGCCGC
ACGGCGTACCGCGCAGATCGCGCAATCGCTCGGCATCGCGGGGCTGAAGGTCGCGGCGGTCGAAGGCGACGACGTGCTCG
ACGTCGTGCTGCGCGGCGCGTTCCGTTTCGAGGAATCGGGCGACGACGTCGCCGCGTATCGCGACCGCATCGTGTCCGCG
AACGCGTATCTCGGCGCCGCGCCGATCGTCGACGCGCTCGCGGCCGGCGCGGACGTCGTGCTGACCGGGCGCGTCGCCGA
TCCGTCGCTGTTCGCCGCGCCGCTGATCCATGCGTTCGGCTGGCGGATGGACGACTGGGACACGCTGGGCGCTGCGACCG
TCGTCGGCCATCTGCTCGAATGCGCGGGGCAGGTGACGGGCGGCTATTTCGCCGATCCCGGCTACAAGGACGTGCCGAAT
CTCGCGCGGCTCGGCTTTCCGATCGGCGAGGTCGCGGCCGACGGCTCGGTCGTGATCACGAAGGTGCCGCACGCGGGCGG
CCGCGTGAGCGCGGCGACCTGCAAGGAACAGCTGCTCTACGAGATTCACGACCCGGCGCGGTATCTGCAGCCCGACGTCG
TGGCCGATTTCACGCGCGTGACGGTTGCCGAGGAGGCGGCCGATCGCGTGCGCGTGACGGGCGGGCGCGGCACCGCGCGG
CCCGATACGCTGAAGGCGTCGGTGGCTTACGTCGACGGCTGGATCGGCGAAGGCCAGATTTCGTACGGCGGCCCGGGCGC
GCTCGCGCGTGCACGTCTGGCACTCGACATCGTTCGCGAGCGGCTCGCGCTGACCGGCGTCGCGGCGAGCGAGCTGCGCT
TCGACCTGATCGGCGTCGATGCGCTGTATGGCGACGCGACGCCGGCCGTGCGCGGTGAGCCGAGTGAAGTCCGCGTGCGG
GTGGCCGGACGCGCGACGAACGCCGCCGAAGCCGCGCGGATCGGCAACGAAGTCGAGACGCTCTATACGAACGGGCCGGC
CGGCGGCGGCGGCGCGTTCAAGTCGACACGCGAGGTGATCGCGGTGCAGTCGGTGCTGCTGCCGCGCGCGGCCGTGACGC
CGTCGTTTTCATTCGTGGAGGCCTGA

Upstream 100 bases:

>100_bases
GGCCGAGCACCAGAAGTTCACGTTTCCGCTGCTGTTCGGCGCGTCGATCGTGATGACGATCGCGTGCGTCGTGCTCGGCG
TGTTTTGATTTTTGTCGGCG

Downstream 100 bases:

>100_bases
TGCAACTGCGTGAACTCGCGCATGCGCGCACCGGCGACAAGGGCAATACGCTGAACGTGTCGGTCATCTGCCACGATCCG
CGTCATTACGACCATCTGTG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 461; Mature: 461

Protein sequence:

>461_residues
MRSPDDGTDMTAKQPERRVRIGAGAGYSGDRIEPAVELAEHGQLDYLVFECLAERTIAIAQQARRNDPALGYDPLLDARM
QAVLPVAAVKRVRIVSNMGAANPRAAARRTAQIAQSLGIAGLKVAAVEGDDVLDVVLRGAFRFEESGDDVAAYRDRIVSA
NAYLGAAPIVDALAAGADVVLTGRVADPSLFAAPLIHAFGWRMDDWDTLGAATVVGHLLECAGQVTGGYFADPGYKDVPN
LARLGFPIGEVAADGSVVITKVPHAGGRVSAATCKEQLLYEIHDPARYLQPDVVADFTRVTVAEEAADRVRVTGGRGTAR
PDTLKASVAYVDGWIGEGQISYGGPGALARARLALDIVRERLALTGVAASELRFDLIGVDALYGDATPAVRGEPSEVRVR
VAGRATNAAEAARIGNEVETLYTNGPAGGGGAFKSTREVIAVQSVLLPRAAVTPSFSFVEA

Sequences:

>Translated_461_residues
MRSPDDGTDMTAKQPERRVRIGAGAGYSGDRIEPAVELAEHGQLDYLVFECLAERTIAIAQQARRNDPALGYDPLLDARM
QAVLPVAAVKRVRIVSNMGAANPRAAARRTAQIAQSLGIAGLKVAAVEGDDVLDVVLRGAFRFEESGDDVAAYRDRIVSA
NAYLGAAPIVDALAAGADVVLTGRVADPSLFAAPLIHAFGWRMDDWDTLGAATVVGHLLECAGQVTGGYFADPGYKDVPN
LARLGFPIGEVAADGSVVITKVPHAGGRVSAATCKEQLLYEIHDPARYLQPDVVADFTRVTVAEEAADRVRVTGGRGTAR
PDTLKASVAYVDGWIGEGQISYGGPGALARARLALDIVRERLALTGVAASELRFDLIGVDALYGDATPAVRGEPSEVRVR
VAGRATNAAEAARIGNEVETLYTNGPAGGGGAFKSTREVIAVQSVLLPRAAVTPSFSFVEA
>Mature_461_residues
MRSPDDGTDMTAKQPERRVRIGAGAGYSGDRIEPAVELAEHGQLDYLVFECLAERTIAIAQQARRNDPALGYDPLLDARM
QAVLPVAAVKRVRIVSNMGAANPRAAARRTAQIAQSLGIAGLKVAAVEGDDVLDVVLRGAFRFEESGDDVAAYRDRIVSA
NAYLGAAPIVDALAAGADVVLTGRVADPSLFAAPLIHAFGWRMDDWDTLGAATVVGHLLECAGQVTGGYFADPGYKDVPN
LARLGFPIGEVAADGSVVITKVPHAGGRVSAATCKEQLLYEIHDPARYLQPDVVADFTRVTVAEEAADRVRVTGGRGTAR
PDTLKASVAYVDGWIGEGQISYGGPGALARARLALDIVRERLALTGVAASELRFDLIGVDALYGDATPAVRGEPSEVRVR
VAGRATNAAEAARIGNEVETLYTNGPAGGGGAFKSTREVIAVQSVLLPRAAVTPSFSFVEA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 48351; Mature: 48351

Theoretical pI: Translated: 5.01; Mature: 5.01

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
1.7 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
1.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRSPDDGTDMTAKQPERRVRIGAGAGYSGDRIEPAVELAEHGQLDYLVFECLAERTIAIA
CCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCHHHHHHHCCCHHHHHHHHHHHHHHHHH
QQARRNDPALGYDPLLDARMQAVLPVAAVKRVRIVSNMGAANPRAAARRTAQIAQSLGIA
HHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCC
GLKVAAVEGDDVLDVVLRGAFRFEESGDDVAAYRDRIVSANAYLGAAPIVDALAAGADVV
CEEEEEECCCHHHHHHHHHHHHCCCCCCHHHHHHHHHEECCCCCCHHHHHHHHHCCCCEE
LTGRVADPSLFAAPLIHAFGWRMDDWDTLGAATVVGHLLECAGQVTGGYFADPGYKDVPN
EECCCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCCCCEECCCCCCCCCH
LARLGFPIGEVAADGSVVITKVPHAGGRVSAATCKEQLLYEIHDPARYLQPDVVADFTRV
HHHHCCCHHHHCCCCCEEEEECCCCCCCCHHHHHHHHHHHHHCCCHHHCCCHHHHHHHHH
TVAEEAADRVRVTGGRGTARPDTLKASVAYVDGWIGEGQISYGGPGALARARLALDIVRE
HHHHHHHCCEEEECCCCCCCCCHHEEEEEEEECCCCCCEECCCCCCHHHHHHHHHHHHHH
RLALTGVAASELRFDLIGVDALYGDATPAVRGEPSEVRVRVAGRATNAAEAARIGNEVET
HHHHHCCCHHHHEEEEEEEEHHCCCCCCCCCCCCCCEEEEEECCCCCHHHHHHCCCHHEE
LYTNGPAGGGGAFKSTREVIAVQSVLLPRAAVTPSFSFVEA
EEECCCCCCCCCHHHHHHHHHHHHHHHCHHHCCCCCHHHCC
>Mature Secondary Structure
MRSPDDGTDMTAKQPERRVRIGAGAGYSGDRIEPAVELAEHGQLDYLVFECLAERTIAIA
CCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCHHHHHHHCCCHHHHHHHHHHHHHHHHH
QQARRNDPALGYDPLLDARMQAVLPVAAVKRVRIVSNMGAANPRAAARRTAQIAQSLGIA
HHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCC
GLKVAAVEGDDVLDVVLRGAFRFEESGDDVAAYRDRIVSANAYLGAAPIVDALAAGADVV
CEEEEEECCCHHHHHHHHHHHHCCCCCCHHHHHHHHHEECCCCCCHHHHHHHHHCCCCEE
LTGRVADPSLFAAPLIHAFGWRMDDWDTLGAATVVGHLLECAGQVTGGYFADPGYKDVPN
EECCCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCCCCEECCCCCCCCCH
LARLGFPIGEVAADGSVVITKVPHAGGRVSAATCKEQLLYEIHDPARYLQPDVVADFTRV
HHHHCCCHHHHCCCCCEEEEECCCCCCCCHHHHHHHHHHHHHCCCHHHCCCHHHHHHHHH
TVAEEAADRVRVTGGRGTARPDTLKASVAYVDGWIGEGQISYGGPGALARARLALDIVRE
HHHHHHHCCEEEECCCCCCCCCHHEEEEEEEECCCCCCEECCCCCCHHHHHHHHHHHHHH
RLALTGVAASELRFDLIGVDALYGDATPAVRGEPSEVRVRVAGRATNAAEAARIGNEVET
HHHHHCCCHHHHEEEEEEEEHHCCCCCCCCCCCCCCEEEEEECCCCCHHHHHHCCCHHEE
LYTNGPAGGGGAFKSTREVIAVQSVLLPRAAVTPSFSFVEA
EEECCCCCCCCCHHHHHHHHHHHHHHHCHHHCCCCCHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA