Click here to switch to the map view.

The map label for this gene is citN [H]

Identifier: 116689389

GI number: 116689389

Start: 1505122

End: 1506420

Strand: Direct

Name: citN [H]

Synonym: Bcen2424_1367

Alternate gene names: 116689389

Gene position: 1505122-1506420 (Clockwise)

Preceding gene: 116689387

Following gene: 116689390

Centisome position: 43.2

GC content: 67.44

Gene sequence:

>1299_bases
ATGCTGCCGTTACTCGGGCTGGGCACGATCGTCGTGCTGCTGGCCGCGATTCTGTCGAAGCGGATGTCGCCGCTCGTCGC
GCTGATCATCGTGCCGATCGCCGCGTCGCTGCTCGGCGGCTTCGGGTTGCACACCAGCAAGTTCGTCATCGACGGGCTGA
AGGGGCTCGCGCCCGTCGTCGGGATGTTCGTGTTCGCGATCCTCTATTTCGGGACGATCACCGACGCCGGCACGCTCGAC
CCGATCATCGACCGGATCTTGCGCGCGGTCGGCACGCGGCCGACGCGCATCGTGATGGGCACGACGCTGCTCGCGCTGCT
GATTCACCTCGACGGCTCGGGCGCCGTGTGCTTTCTCGTGACGATTCCCGCGGTGCTGCCGCTGTACGACCGGCTGAAGA
TGGACCGCCGCGTGCTGGCCGCCGCCGTGTCGATGGCCGCGGGCATCAACTTCCTGCCGTGGACGGGCCCGATGATCCGG
GCGTCGGCCTCGCTGCACCTGCCGGTGTCGGCGCTGTTCAATCCGCTGATTCCGGTGCAGGCGATCGGGCTCGTGTTCGT
GTTCGGCGTCGCGTACTGGCTTGGGCGGCGCGAGGAGAAGCGGCTCGGCCTGTCGCGCGACGATGCGTCGATTCCGCTGC
CGAAACGCGAGCTGACGCCTGACGAGCAGGCGCTGCGCAGGCCGCACCTGTTCTGGTTCAACCTCGTGCTGACGCTCTTC
GTGCTCGGCACGATGGTCGTGATGGGCGAGAAGATCCCGCCCGCGATCATGTTCATGGTCGGGCTGTGCATCGCGCTAAT
GGTGAATTACCCCGACGTCGACATGCAGAGAAAGCGCGTCGACGCGCATGCGCGTGCCGCGCTGATGATGGCCGGCATCC
TGCTCGCGGCCGGCGTGTTCACCGGGATCATGCAGGGCAGCGGGATGCTGAAGGCGATGGCGCAGGCGGCGGTCGGCTTC
GTGCCGCCGTCGATGGCCGGCCACATACCGGTGGCGCTCGGCCTCGCGTCGATGCCGCTCAGCATGCTGTTCGATCCCGA
TTCGTTCTACTTCGGCGTGCTGCCCGTGATCGCCGAAGTGGCCGGCCAACTGGGCGTGCCGGCCGTGCAGGTCGGGCAGG
CGGCGCTGCTCGGCCAGATGACGACGGGCTTTCCGGTCAGCCCGCTCACACCGGCGACGTTCCTCGTCGTCGGGCTGTGC
GGGATCGAACTGGCCGAGCACCAGAAGTTCACGTTTCCGCTGCTGTTCGGCGCGTCGATCGTGATGACGATCGCGTGCGT
CGTGCTCGGCGTGTTTTGA

Upstream 100 bases:

>100_bases
CATAACGATTCATGATTGCTGCGATCAAATCATTTCAATTGTGCTATCGCTGCGCTGACCTTACGCTCGTCTCCAACAAA
AGACAAGGTAGGAGACACGG

Downstream 100 bases:

>100_bases
TTTTTGTCGGCGATGCGCTCGCCGGATGACGGTACGGACATGACAGCAAAGCAACCTGAACGGCGCGTGCGCATCGGTGC
GGGCGCCGGCTACTCGGGCG

Product: CitMHS family citrate/H+ symporter

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 432; Mature: 432

Protein sequence:

>432_residues
MLPLLGLGTIVVLLAAILSKRMSPLVALIIVPIAASLLGGFGLHTSKFVIDGLKGLAPVVGMFVFAILYFGTITDAGTLD
PIIDRILRAVGTRPTRIVMGTTLLALLIHLDGSGAVCFLVTIPAVLPLYDRLKMDRRVLAAAVSMAAGINFLPWTGPMIR
ASASLHLPVSALFNPLIPVQAIGLVFVFGVAYWLGRREEKRLGLSRDDASIPLPKRELTPDEQALRRPHLFWFNLVLTLF
VLGTMVVMGEKIPPAIMFMVGLCIALMVNYPDVDMQRKRVDAHARAALMMAGILLAAGVFTGIMQGSGMLKAMAQAAVGF
VPPSMAGHIPVALGLASMPLSMLFDPDSFYFGVLPVIAEVAGQLGVPAVQVGQAALLGQMTTGFPVSPLTPATFLVVGLC
GIELAEHQKFTFPLLFGASIVMTIACVVLGVF

Sequences:

>Translated_432_residues
MLPLLGLGTIVVLLAAILSKRMSPLVALIIVPIAASLLGGFGLHTSKFVIDGLKGLAPVVGMFVFAILYFGTITDAGTLD
PIIDRILRAVGTRPTRIVMGTTLLALLIHLDGSGAVCFLVTIPAVLPLYDRLKMDRRVLAAAVSMAAGINFLPWTGPMIR
ASASLHLPVSALFNPLIPVQAIGLVFVFGVAYWLGRREEKRLGLSRDDASIPLPKRELTPDEQALRRPHLFWFNLVLTLF
VLGTMVVMGEKIPPAIMFMVGLCIALMVNYPDVDMQRKRVDAHARAALMMAGILLAAGVFTGIMQGSGMLKAMAQAAVGF
VPPSMAGHIPVALGLASMPLSMLFDPDSFYFGVLPVIAEVAGQLGVPAVQVGQAALLGQMTTGFPVSPLTPATFLVVGLC
GIELAEHQKFTFPLLFGASIVMTIACVVLGVF
>Mature_432_residues
MLPLLGLGTIVVLLAAILSKRMSPLVALIIVPIAASLLGGFGLHTSKFVIDGLKGLAPVVGMFVFAILYFGTITDAGTLD
PIIDRILRAVGTRPTRIVMGTTLLALLIHLDGSGAVCFLVTIPAVLPLYDRLKMDRRVLAAAVSMAAGINFLPWTGPMIR
ASASLHLPVSALFNPLIPVQAIGLVFVFGVAYWLGRREEKRLGLSRDDASIPLPKRELTPDEQALRRPHLFWFNLVLTLF
VLGTMVVMGEKIPPAIMFMVGLCIALMVNYPDVDMQRKRVDAHARAALMMAGILLAAGVFTGIMQGSGMLKAMAQAAVGF
VPPSMAGHIPVALGLASMPLSMLFDPDSFYFGVLPVIAEVAGQLGVPAVQVGQAALLGQMTTGFPVSPLTPATFLVVGLC
GIELAEHQKFTFPLLFGASIVMTIACVVLGVF

Specific function: Transports the free citrate anion. Probably cotransports citrate and at least three or four protons. The citrate uptake is inhibited by the presence of magnesium ions [H]

COG id: COG2851

COG function: function code C; H+/citrate symporter

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Probable) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the CitM (TC 2.A.11) transporter family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR014738
- InterPro:   IPR004680 [H]

Pfam domain/function: PF03600 CitMHS [H]

EC number: NA

Molecular weight: Translated: 45830; Mature: 45830

Theoretical pI: Translated: 9.50; Mature: 9.50

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
5.3 %Met     (Translated Protein)
6.2 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
5.3 %Met     (Mature Protein)
6.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLPLLGLGTIVVLLAAILSKRMSPLVALIIVPIAASLLGGFGLHTSKFVIDGLKGLAPVV
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHH
GMFVFAILYFGTITDAGTLDPIIDRILRAVGTRPTRIVMGTTLLALLIHLDGSGAVCFLV
HHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCCEEHHHHHHHHHHHHCCCCCCEEHHH
TIPAVLPLYDRLKMDRRVLAAAVSMAAGINFLPWTGPMIRASASLHLPVSALFNPLIPVQ
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHCCCCCCCCHHHHHCCCHHHH
AIGLVFVFGVAYWLGRREEKRLGLSRDDASIPLPKRELTPDEQALRRPHLFWFNLVLTLF
HHHHHHHHHHHHHHCCCHHHHCCCCCCCCCCCCCCCCCCCCHHHHHCCHHHHHHHHHHHH
VLGTMVVMGEKIPPAIMFMVGLCIALMVNYPDVDMQRKRVDAHARAALMMAGILLAAGVF
HHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
TGIMQGSGMLKAMAQAAVGFVPPSMAGHIPVALGLASMPLSMLFDPDSFYFGVLPVIAEV
HHHHCCCHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHCCHHHEECCCCHHHHHHHHHHHH
AGQLGVPAVQVGQAALLGQMTTGFPVSPLTPATFLVVGLCGIELAEHQKFTFPLLFGASI
HHHCCCCHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHH
VMTIACVVLGVF
HHHHHHHHHHCC
>Mature Secondary Structure
MLPLLGLGTIVVLLAAILSKRMSPLVALIIVPIAASLLGGFGLHTSKFVIDGLKGLAPVV
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHH
GMFVFAILYFGTITDAGTLDPIIDRILRAVGTRPTRIVMGTTLLALLIHLDGSGAVCFLV
HHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCCEEHHHHHHHHHHHHCCCCCCEEHHH
TIPAVLPLYDRLKMDRRVLAAAVSMAAGINFLPWTGPMIRASASLHLPVSALFNPLIPVQ
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHCCCCCCCCHHHHHCCCHHHH
AIGLVFVFGVAYWLGRREEKRLGLSRDDASIPLPKRELTPDEQALRRPHLFWFNLVLTLF
HHHHHHHHHHHHHHCCCHHHHCCCCCCCCCCCCCCCCCCCCHHHHHCCHHHHHHHHHHHH
VLGTMVVMGEKIPPAIMFMVGLCIALMVNYPDVDMQRKRVDAHARAALMMAGILLAAGVF
HHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
TGIMQGSGMLKAMAQAAVGFVPPSMAGHIPVALGLASMPLSMLFDPDSFYFGVLPVIAEV
HHHHCCCHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHCCHHHEECCCCHHHHHHHHHHHH
AGQLGVPAVQVGQAALLGQMTTGFPVSPLTPATFLVVGLCGIELAEHQKFTFPLLFGASI
HHHCCCCHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHH
VMTIACVVLGVF
HHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 8969509; 9384377; 7704256; 8892821 [H]