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The map label for this gene is yvrC [H]

Identifier: 116689371

GI number: 116689371

Start: 1487810

End: 1488802

Strand: Direct

Name: yvrC [H]

Synonym: Bcen2424_1349

Alternate gene names: 116689371

Gene position: 1487810-1488802 (Clockwise)

Preceding gene: 116689370

Following gene: 116689372

Centisome position: 42.71

GC content: 71.2

Gene sequence:

>993_bases
ATGACCACCATGCCGTTTCCTCTCCTGTCTTTCGTCGCCCGCCGGCTGGTCGCAGCTGCCGTGCTCGGCGGCGCGGCCGC
GCACGCGTTCGCCTATCCCGTCACCGTGCGCAGTTGCGATCGCGACGTGACGTTCGAGCGCGCACCGACGCGCGCGGTGA
GCAACGACGTGAACCTGACCGAGATGATGCTCGCGCTCGGCCTGAAGGACCGGCTCGTCGGCTATACGGGCATCGGCGGC
TGGAAGACGGGCACCGCGCGCGTGCGCGACGCGTTGCGCGGCGTGCCCGAACTGGCGAGCCAGTATCCGTCGCTGGAAGT
GCTGGCCGCCGCGCGCGCCGATTTCTATCTCGCGGGCTGGAACTACGGGATGCACGTCGGCGGGCCGGTGACACCGGCGA
CGCTCGCGCCGTTCGGCATCCGCACCTACGAACTGACCGAATCGTGTTCGCACGTGATGAAGCAGTCGGCCGCGTCGTTC
GACGACGTGTTCCGCGACCTGACCAATCTCGGTCGCATCTTCGGTGTCGATGCGCGCGCCGCGCAGGTCGTCGCCGGGAT
GCGCGCGCGGCTCGCGGCGGTGTCGCGCGCGATCGGGCGCCCGGCGCCGCTGCGCGTGTTCGTGTACGACAGCGGCACCG
ACAAGCCGATGACCGCGGGCGGGCTCGCGATGCCGACCGCGTTGCTCGCGGCGGCGGGCGCGCGCAACGTGATGGACGAC
CTGCCGCGCAGCTGGACGCAGGTGAGCTGGGAAAGCGTGGTCGCGCGCGATCCGCAGGTGATCGTGATCGTCGACTATTC
GGCGGTCACGGCCGCGCAGAAGCAGCAGTTCCTGGCGGGCCAGCCGGCGCTCGCGCGCGTGGCCGCGATTCGCGAGCGGC
GCTTCGTCGTGATTCCGTACGATGCCGCGACGCCCGGCCCGGAGAACGTCGCGGCGGTCGAGACGCTGGCCCGCGCGCTG
TATCCGGCCGCATTCGCCGGAGCGGCACGATGA

Upstream 100 bases:

>100_bases
TGCTGACCGAAGCGCTGCTGCGCGACGTGTTCGGCGTCGCCGCGCTCGTCGATCGCCATCCCGCCACGGGCCGCCCGCGC
ATCACGCCGCTTCATCCGGA

Downstream 100 bases:

>100_bases
GCGTGCGCGGGCAGGCGGCGCGGCTCGACATGCGCGTGGTGCTGCCGGGGCTGGCCGTGCTGCTGATCGTGTCGATCGTC
GTGTCGGCCGCGTTCGGTCC

Product: periplasmic binding protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 330; Mature: 329

Protein sequence:

>330_residues
MTTMPFPLLSFVARRLVAAAVLGGAAAHAFAYPVTVRSCDRDVTFERAPTRAVSNDVNLTEMMLALGLKDRLVGYTGIGG
WKTGTARVRDALRGVPELASQYPSLEVLAAARADFYLAGWNYGMHVGGPVTPATLAPFGIRTYELTESCSHVMKQSAASF
DDVFRDLTNLGRIFGVDARAAQVVAGMRARLAAVSRAIGRPAPLRVFVYDSGTDKPMTAGGLAMPTALLAAAGARNVMDD
LPRSWTQVSWESVVARDPQVIVIVDYSAVTAAQKQQFLAGQPALARVAAIRERRFVVIPYDAATPGPENVAAVETLARAL
YPAAFAGAAR

Sequences:

>Translated_330_residues
MTTMPFPLLSFVARRLVAAAVLGGAAAHAFAYPVTVRSCDRDVTFERAPTRAVSNDVNLTEMMLALGLKDRLVGYTGIGG
WKTGTARVRDALRGVPELASQYPSLEVLAAARADFYLAGWNYGMHVGGPVTPATLAPFGIRTYELTESCSHVMKQSAASF
DDVFRDLTNLGRIFGVDARAAQVVAGMRARLAAVSRAIGRPAPLRVFVYDSGTDKPMTAGGLAMPTALLAAAGARNVMDD
LPRSWTQVSWESVVARDPQVIVIVDYSAVTAAQKQQFLAGQPALARVAAIRERRFVVIPYDAATPGPENVAAVETLARAL
YPAAFAGAAR
>Mature_329_residues
TTMPFPLLSFVARRLVAAAVLGGAAAHAFAYPVTVRSCDRDVTFERAPTRAVSNDVNLTEMMLALGLKDRLVGYTGIGGW
KTGTARVRDALRGVPELASQYPSLEVLAAARADFYLAGWNYGMHVGGPVTPATLAPFGIRTYELTESCSHVMKQSAASFD
DVFRDLTNLGRIFGVDARAAQVVAGMRARLAAVSRAIGRPAPLRVFVYDSGTDKPMTAGGLAMPTALLAAAGARNVMDDL
PRSWTQVSWESVVARDPQVIVIVDYSAVTAAQKQQFLAGQPALARVAAIRERRFVVIPYDAATPGPENVAAVETLARALY
PAAFAGAAR

Specific function: Probably part of an ABC transporter complex [H]

COG id: COG0614

COG function: function code P; ABC-type Fe3+-hydroxamate transport system, periplasmic component

Gene ontology:

Cell location: Cell membrane; Lipid-anchor (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 Fe/B12 periplasmic-binding domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002491 [H]

Pfam domain/function: PF01497 Peripla_BP_2 [H]

EC number: NA

Molecular weight: Translated: 35100; Mature: 34969

Theoretical pI: Translated: 9.85; Mature: 9.85

Prosite motif: PS50983 FE_B12_PBP

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTTMPFPLLSFVARRLVAAAVLGGAAAHAFAYPVTVRSCDRDVTFERAPTRAVSNDVNLT
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEECCCCCCCCCCCCCHHHCCCCCHH
EMMLALGLKDRLVGYTGIGGWKTGTARVRDALRGVPELASQYPSLEVLAAARADFYLAGW
HHHHHHCHHHHHCEEECCCCCCCCHHHHHHHHCCCHHHHHHCCCHHHHHHHCCCEEEECC
NYGMHVGGPVTPATLAPFGIRTYELTESCSHVMKQSAASFDDVFRDLTNLGRIFGVDARA
CCCEECCCCCCCHHHCCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCHHH
AQVVAGMRARLAAVSRAIGRPAPLRVFVYDSGTDKPMTAGGLAMPTALLAAAGARNVMDD
HHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCCCCCCCCHHHHHHHHHHHCCHHHHHH
LPRSWTQVSWESVVARDPQVIVIVDYSAVTAAQKQQFLAGQPALARVAAIRERRFVVIPY
CCHHHHHHHHHHHHCCCCCEEEEECCHHHHHHHHHHHHCCCHHHHHHHHHHHCCEEEEEE
DAATPGPENVAAVETLARALYPAAFAGAAR
CCCCCCCCHHHHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure 
TTMPFPLLSFVARRLVAAAVLGGAAAHAFAYPVTVRSCDRDVTFERAPTRAVSNDVNLT
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEECCCCCCCCCCCCCHHHCCCCCHH
EMMLALGLKDRLVGYTGIGGWKTGTARVRDALRGVPELASQYPSLEVLAAARADFYLAGW
HHHHHHCHHHHHCEEECCCCCCCCHHHHHHHHCCCHHHHHHCCCHHHHHHHCCCEEEECC
NYGMHVGGPVTPATLAPFGIRTYELTESCSHVMKQSAASFDDVFRDLTNLGRIFGVDARA
CCCEECCCCCCCHHHCCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCHHH
AQVVAGMRARLAAVSRAIGRPAPLRVFVYDSGTDKPMTAGGLAMPTALLAAAGARNVMDD
HHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCCCCCCCCHHHHHHHHHHHCCHHHHHH
LPRSWTQVSWESVVARDPQVIVIVDYSAVTAAQKQQFLAGQPALARVAAIRERRFVVIPY
CCHHHHHHHHHHHHCCCCCEEEEECCHHHHHHHHHHHHCCCHHHHHHHHHHHCCEEEEEE
DAATPGPENVAAVETLARALYPAAFAGAAR
CCCCCCCCHHHHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9639930; 9384377 [H]