| Definition | Burkholderia cenocepacia HI2424 chromosome 1, complete sequence. |
|---|---|
| Accession | NC_008542 |
| Length | 3,483,902 |
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The map label for this gene is 116689333
Identifier: 116689333
GI number: 116689333
Start: 1443617
End: 1444423
Strand: Direct
Name: 116689333
Synonym: Bcen2424_1311
Alternate gene names: NA
Gene position: 1443617-1444423 (Clockwise)
Preceding gene: 116689332
Following gene: 116689335
Centisome position: 41.44
GC content: 67.66
Gene sequence:
>807_bases ATGCGAGAACTGCCGACGCCTACGCTCCCTTTTGCCTCGCTGCCCCTCGACACGTCGCGACGCCACCTGCCGCGCGCCAG TGAAACCGTCACATCGGAGTATCGCCTGCGCGCCGCATGGGCGCGTACGGAAGACGAATTGCGCGAAGCCCAGCGCCTGC GCTACAGCGTGTTCGCCGAAGAGATGGGCGCGCAGGTCAGCGGCCCGTCCGGTCTCGATGTCGATCCGTTCGACGTGTAT TGCGACCACCTGCTGGTCCGCGATCTCGACACGCTGAAAGTCGTCGGTACGTACCGCGTGCTGCCGCCGCACCAGGCGGC GCGTGTCGGCCGCCTGTACGCCGAAGGCGAATTCGACCTGTCGCGCCTCACGCACCTGCGCGGCAAGATGGTCGAGGTCG GCCGCTCGTGCGTGCACAGCGACTACCGCAGCGGCGCCGTCATCATGGCGCTGTGGGGCGGTCTGGGCGCGTACATGATG CAGAACGGCTACGAGACGATGCTCGGCTGCGCGAGCGTGTCGATGGCCGACGGCGGCCACTACGCGGCGAACCTGTACCA GTCGCTGTCGGCGAGCTCGCTGACGGCGCCCGAGTATCGCGCATTCCCGCACACGGCCCTGCCGGTCGATGAACTGCAGA CGGGCACCGTCGTCGCACCGCCGCCGCTGATCAAGGGTTACCTGCGTCTCGGCGCGAAGATTTGCGGCGCCCCGGCCTGG GATCCCGACTTCAACTGCGCGGATTTCCTGACGCTGTTCCGTCTGTCGGACATCAACGCGCGCTACGCCCGCCACTTCCT GGGCTGA
Upstream 100 bases:
>100_bases GACACGTCATTGAAAGGACACGGTCGTGCCACATAACGGTCACGGCCGGTTACTACATTGGCGGGCATGTCGTCCTATTC CTTACGACCAGGAAAGCCTA
Downstream 100 bases:
>100_bases GCGATCCGAATCGCGCCGCACCTCCGAGGCGGGGCGCACGCAAGCAAACGCCGTCGCGCGGTAGCTGCCGCACGACGGCG TTCGTGTATCCGGTCCGTGT
Product: putative hemolysin-like protein
Products: NA
Alternate protein names: Hemolysin; Hemolysin-Like Protein; Ornithine-Acyl(Acyl Carrier Protein) N-Acyltransferase; Phospholipid/Glycerol Acyltransferase; Ornithine-Acyl(Acyl Carrier Protein) N- Acyltransferase; Ornithine-Acyl N-Acyltransferase; Acyl-CoA N-Acyltransferase; Acyl-CoA N-Acyltransferases Superfamily Protein; Nudix Hydrolase; Phosphohistidine Phosphatase SixA; Acyltransferase Domain Protein; Hemolysin Protein
Number of amino acids: Translated: 268; Mature: 268
Protein sequence:
>268_residues MRELPTPTLPFASLPLDTSRRHLPRASETVTSEYRLRAAWARTEDELREAQRLRYSVFAEEMGAQVSGPSGLDVDPFDVY CDHLLVRDLDTLKVVGTYRVLPPHQAARVGRLYAEGEFDLSRLTHLRGKMVEVGRSCVHSDYRSGAVIMALWGGLGAYMM QNGYETMLGCASVSMADGGHYAANLYQSLSASSLTAPEYRAFPHTALPVDELQTGTVVAPPPLIKGYLRLGAKICGAPAW DPDFNCADFLTLFRLSDINARYARHFLG
Sequences:
>Translated_268_residues MRELPTPTLPFASLPLDTSRRHLPRASETVTSEYRLRAAWARTEDELREAQRLRYSVFAEEMGAQVSGPSGLDVDPFDVY CDHLLVRDLDTLKVVGTYRVLPPHQAARVGRLYAEGEFDLSRLTHLRGKMVEVGRSCVHSDYRSGAVIMALWGGLGAYMM QNGYETMLGCASVSMADGGHYAANLYQSLSASSLTAPEYRAFPHTALPVDELQTGTVVAPPPLIKGYLRLGAKICGAPAW DPDFNCADFLTLFRLSDINARYARHFLG >Mature_268_residues MRELPTPTLPFASLPLDTSRRHLPRASETVTSEYRLRAAWARTEDELREAQRLRYSVFAEEMGAQVSGPSGLDVDPFDVY CDHLLVRDLDTLKVVGTYRVLPPHQAARVGRLYAEGEFDLSRLTHLRGKMVEVGRSCVHSDYRSGAVIMALWGGLGAYMM QNGYETMLGCASVSMADGGHYAANLYQSLSASSLTAPEYRAFPHTALPVDELQTGTVVAPPPLIKGYLRLGAKICGAPAW DPDFNCADFLTLFRLSDINARYARHFLG
Specific function: Unknown
COG id: COG3176
COG function: function code R; Putative hemolysin
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 29630; Mature: 29630
Theoretical pI: Translated: 6.71; Mature: 6.71
Prosite motif: PS00228 TUBULIN_B_AUTOREG
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.9 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 4.9 %Cys+Met (Translated Protein) 1.9 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 4.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRELPTPTLPFASLPLDTSRRHLPRASETVTSEYRLRAAWARTEDELREAQRLRYSVFAE CCCCCCCCCCCCCCCCCCCHHHCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHH EMGAQVSGPSGLDVDPFDVYCDHLLVRDLDTLKVVGTYRVLPPHQAARVGRLYAEGEFDL HHCCCCCCCCCCCCCHHHHHHHHHHHHCHHHHEEEEEEECCCCHHHHHHHHHHCCCCCCH SRLTHLRGKMVEVGRSCVHSDYRSGAVIMALWGGLGAYMMQNGYETMLGCASVSMADGGH HHHHHHHHHHHHHHHHHHHHHHCCCEEEEEHHHHHHHHHHHCCHHHHHHHHHHCCCCCCH YAANLYQSLSASSLTAPEYRAFPHTALPVDELQTGTVVAPPPLIKGYLRLGAKICGAPAW HHHHHHHHHCCCCCCCCCHHCCCCCCCCHHHCCCCCEECCCHHHHHHHHHHHHHHCCCCC DPDFNCADFLTLFRLSDINARYARHFLG CCCCCHHHHHHHHHHHCCHHHHHHHHCC >Mature Secondary Structure MRELPTPTLPFASLPLDTSRRHLPRASETVTSEYRLRAAWARTEDELREAQRLRYSVFAE CCCCCCCCCCCCCCCCCCCHHHCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHH EMGAQVSGPSGLDVDPFDVYCDHLLVRDLDTLKVVGTYRVLPPHQAARVGRLYAEGEFDL HHCCCCCCCCCCCCCHHHHHHHHHHHHCHHHHEEEEEEECCCCHHHHHHHHHHCCCCCCH SRLTHLRGKMVEVGRSCVHSDYRSGAVIMALWGGLGAYMMQNGYETMLGCASVSMADGGH HHHHHHHHHHHHHHHHHHHHHHCCCEEEEEHHHHHHHHHHHCCHHHHHHHHHHCCCCCCH YAANLYQSLSASSLTAPEYRAFPHTALPVDELQTGTVVAPPPLIKGYLRLGAKICGAPAW HHHHHHHHHCCCCCCCCCHHCCCCCCCCHHHCCCCCEECCCHHHHHHHHHHHHHHCCCCC DPDFNCADFLTLFRLSDINARYARHFLG CCCCCHHHHHHHHHHHCCHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA