| Definition | Burkholderia cenocepacia HI2424 chromosome 1, complete sequence. |
|---|---|
| Accession | NC_008542 |
| Length | 3,483,902 |
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The map label for this gene is phoU [H]
Identifier: 116689326
GI number: 116689326
Start: 1435197
End: 1435901
Strand: Direct
Name: phoU [H]
Synonym: Bcen2424_1304
Alternate gene names: 116689326
Gene position: 1435197-1435901 (Clockwise)
Preceding gene: 116689325
Following gene: 116689327
Centisome position: 41.2
GC content: 61.99
Gene sequence:
>705_bases ATGTCGGATAAACATCTGTCGAGCCAGTTCGACGCGGACCTGAATGCCGTGTCGTCGAAAGTGCTGGAAATGGGCGGACT CGTGGAGTCGCAGATCGTCGGCGCGATGCGCGCGCTGAACGAATTCGATCGCGATACGGCCGAGAAGGTGATCGCGGCCG AGGAAACGCTGAACGCGATGGAAGTGGACATCGACCAGGAATGCGGCAACATCATCGCGCGGAGACAGCCTGCCGCACGT GACCTGCGTCTTTTGATGTCGATTTCGAAAACGATTACGAACCTCGAGCGCGCCGGCGACGAGGCCGAGAAGATCGCCAA ACGCGTGCGCCGCCTGGTCGACGAGCCGGCCGCGCGTGCGGTCAACATCGCCGAGATCAAGGTGTCGGGCGAGATGGCCG TGACGATCCTGCGCCGCGCGCTCGACGCGTTCGCGCGCCTCGATACGGTGGCCGCCGCGCAGATCGTCAAGGACGACAAG GAAATCGACATGGAATTCCGCGCGTTCGTGCGCAAGCTCGTGTCGTACATGCAGGAAGATCCGCGCACGATCTCGGTCGG CCTCGACTACCTGTTCATCGCGAAGGCGATCGAACGGATCGGCGACCACGCGAAGAACATCGCCGAATTCATCATCTACA TCGTGAAGGGCACCGACGTGCGGCACCAGCCGCGCGACACGCTCGATCGCGAAGCCAACAGTTAA
Upstream 100 bases:
>100_bases CGAGTTCGGCGAGACCGAAAAGATCTTCATCAAGCCGGTGCGCAAGGAAACGGAAGACTACATCACCGGCCGCTTCGGCT GATGACGGAGAACAACAACC
Downstream 100 bases:
>100_bases TCGACTCCATAGGAAGAACAGAGGTGCCGATGCCCAGCAACATTCTCGTCGTTGAAGATGAGCCCGCGATTTCCGAACTG ATCTCGGTGAATCTCCAGCA
Product: phosphate uptake regulator, PhoU
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 234; Mature: 233
Protein sequence:
>234_residues MSDKHLSSQFDADLNAVSSKVLEMGGLVESQIVGAMRALNEFDRDTAEKVIAAEETLNAMEVDIDQECGNIIARRQPAAR DLRLLMSISKTITNLERAGDEAEKIAKRVRRLVDEPAARAVNIAEIKVSGEMAVTILRRALDAFARLDTVAAAQIVKDDK EIDMEFRAFVRKLVSYMQEDPRTISVGLDYLFIAKAIERIGDHAKNIAEFIIYIVKGTDVRHQPRDTLDREANS
Sequences:
>Translated_234_residues MSDKHLSSQFDADLNAVSSKVLEMGGLVESQIVGAMRALNEFDRDTAEKVIAAEETLNAMEVDIDQECGNIIARRQPAAR DLRLLMSISKTITNLERAGDEAEKIAKRVRRLVDEPAARAVNIAEIKVSGEMAVTILRRALDAFARLDTVAAAQIVKDDK EIDMEFRAFVRKLVSYMQEDPRTISVGLDYLFIAKAIERIGDHAKNIAEFIIYIVKGTDVRHQPRDTLDREANS >Mature_233_residues SDKHLSSQFDADLNAVSSKVLEMGGLVESQIVGAMRALNEFDRDTAEKVIAAEETLNAMEVDIDQECGNIIARRQPAARD LRLLMSISKTITNLERAGDEAEKIAKRVRRLVDEPAARAVNIAEIKVSGEMAVTILRRALDAFARLDTVAAAQIVKDDKE IDMEFRAFVRKLVSYMQEDPRTISVGLDYLFIAKAIERIGDHAKNIAEFIIYIVKGTDVRHQPRDTLDREANS
Specific function: Not known; probably involved in phosphate transport and/or metabolism [H]
COG id: COG0704
COG function: function code P; Phosphate uptake regulator
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the phoU family [H]
Homologues:
Organism=Escherichia coli, GI1790161, Length=229, Percent_Identity=45.4148471615721, Blast_Score=202, Evalue=2e-53,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR008170 [H]
Pfam domain/function: PF01895 PhoU [H]
EC number: NA
Molecular weight: Translated: 26115; Mature: 25984
Theoretical pI: Translated: 4.97; Mature: 4.97
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 3.4 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSDKHLSSQFDADLNAVSSKVLEMGGLVESQIVGAMRALNEFDRDTAEKVIAAEETLNAM CCCCHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH EVDIDQECGNIIARRQPAARDLRLLMSISKTITNLERAGDEAEKIAKRVRRLVDEPAARA HCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCHHHHH VNIAEIKVSGEMAVTILRRALDAFARLDTVAAAQIVKDDKEIDMEFRAFVRKLVSYMQED EEHHHEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHCCHHHHHHHHHHHHHHHCC PRTISVGLDYLFIAKAIERIGDHAKNIAEFIIYIVKGTDVRHQPRDTLDREANS CCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHCCCCCC >Mature Secondary Structure SDKHLSSQFDADLNAVSSKVLEMGGLVESQIVGAMRALNEFDRDTAEKVIAAEETLNAM CCCHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH EVDIDQECGNIIARRQPAARDLRLLMSISKTITNLERAGDEAEKIAKRVRRLVDEPAARA HCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCHHHHH VNIAEIKVSGEMAVTILRRALDAFARLDTVAAAQIVKDDKEIDMEFRAFVRKLVSYMQED EEHHHEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHCCHHHHHHHHHHHHHHHCC PRTISVGLDYLFIAKAIERIGDHAKNIAEFIIYIVKGTDVRHQPRDTLDREANS CCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 10383982 [H]