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The map label for this gene is allS [H]

Identifier: 116689263

GI number: 116689263

Start: 1371207

End: 1372106

Strand: Direct

Name: allS [H]

Synonym: Bcen2424_1241

Alternate gene names: 116689263

Gene position: 1371207-1372106 (Clockwise)

Preceding gene: 116689250

Following gene: 116689264

Centisome position: 39.36

GC content: 67.11

Gene sequence:

>900_bases
ATGGAGCGAAGCCCCAATCTGGATCAACTGCGCGCGTTCATCGCGGTGGTCGAAGCCGGTAGCTTTTCCGGCGCGGCGCG
GCGGCTCGAGCGCGCGCAATCCGTCGTCAGCTACGCGATCGCCAATCTGGAGTCGTTGCTGGGCGTGCCGCTCTTCGAAC
GGGGCAAACGGCGACCGACGTTGACGGCGGCCGGTGAAATCGTCCTGGCCGACGCACGGCGGCTCGACATGCTGGCGGGC
CAGTTGCTGGCGAAGACCGCCGGCCTGCGCGGCGGGGTGGAAGCCGAGCTGTCGCTGGCGGTGGACGTGATGTTTCCACT
GGCCAGGCTCGTCGAGGGGCTGCGCGCGTTCGCCGACGAATTTCCGACGGTCGCGCTCAACCTGACCATCGAAGCGCTCG
GCGGCGTGATGAAGCTGGTGGTCGACGGCGGCTGCGCGCTCGGCGTCAGCGGGCCCGTGCAAAACTGGCCGGATGTGATC
GACGCGACGTCCATGGGAGCGATCGAACTGGTCACCGTCGCCGCGCCCACGCATCCGCTCGTGCAGCGCCGCGGGCGTGT
GCCGCTGTCCGAGGCGCGCGAATATACGCAACTCGTGCTGACGGATCGAAGCAAGCTGACCGAAGGGCAGTCGTTCGGTG
TGTATGCGACCCGCACATGGAAGACTGCGGACCTCGGCGCCAAGCATCGGCTGTTGCTCGAAGGGCTCGGCTGGGGTTCG
ATGCCGATGCATTTGATCGAGGACGACCTGCGGCAAGGCCGACTGGCCGTCGTGCGGTTGTCGGATCGCGATGTGATTCG
ATACGGTATGTCGTTGATCAGGCGGGCCGATCGTGCGAGCGGGCCCGCGACGCAGTGGCTGATCGACCATCTGACGCGTC
CTGGCGAACCGGACGCCTGA

Upstream 100 bases:

>100_bases
CGCGCACGCGTCGAGCGCTGCTGAACAGGAATTTAGGAGAATGCCGTGATCGAAACAATCGTCTAGAATGGATCATTAAA
ATCGATTTTCTTGATGGATC

Downstream 100 bases:

>100_bases
AGCGCGACGCCGTCTATCCGCTTCACTGCGCCGAAAACGGCGCCATGTGATACTGCCAGGCACGTCGCACGGGCGCCTGC
GTCGCCATCGGCAAACGCGT

Product: LysR family transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 299; Mature: 299

Protein sequence:

>299_residues
MERSPNLDQLRAFIAVVEAGSFSGAARRLERAQSVVSYAIANLESLLGVPLFERGKRRPTLTAAGEIVLADARRLDMLAG
QLLAKTAGLRGGVEAELSLAVDVMFPLARLVEGLRAFADEFPTVALNLTIEALGGVMKLVVDGGCALGVSGPVQNWPDVI
DATSMGAIELVTVAAPTHPLVQRRGRVPLSEAREYTQLVLTDRSKLTEGQSFGVYATRTWKTADLGAKHRLLLEGLGWGS
MPMHLIEDDLRQGRLAVVRLSDRDVIRYGMSLIRRADRASGPATQWLIDHLTRPGEPDA

Sequences:

>Translated_299_residues
MERSPNLDQLRAFIAVVEAGSFSGAARRLERAQSVVSYAIANLESLLGVPLFERGKRRPTLTAAGEIVLADARRLDMLAG
QLLAKTAGLRGGVEAELSLAVDVMFPLARLVEGLRAFADEFPTVALNLTIEALGGVMKLVVDGGCALGVSGPVQNWPDVI
DATSMGAIELVTVAAPTHPLVQRRGRVPLSEAREYTQLVLTDRSKLTEGQSFGVYATRTWKTADLGAKHRLLLEGLGWGS
MPMHLIEDDLRQGRLAVVRLSDRDVIRYGMSLIRRADRASGPATQWLIDHLTRPGEPDA
>Mature_299_residues
MERSPNLDQLRAFIAVVEAGSFSGAARRLERAQSVVSYAIANLESLLGVPLFERGKRRPTLTAAGEIVLADARRLDMLAG
QLLAKTAGLRGGVEAELSLAVDVMFPLARLVEGLRAFADEFPTVALNLTIEALGGVMKLVVDGGCALGVSGPVQNWPDVI
DATSMGAIELVTVAAPTHPLVQRRGRVPLSEAREYTQLVLTDRSKLTEGQSFGVYATRTWKTADLGAKHRLLLEGLGWGS
MPMHLIEDDLRQGRLAVVRLSDRDVIRYGMSLIRRADRASGPATQWLIDHLTRPGEPDA

Specific function: Positive regulator essential for the expression of allD operon. Binds to the allD promoter [H]

COG id: COG0583

COG function: function code K; Transcriptional regulator

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH lysR-type DNA-binding domain [H]

Homologues:

Organism=Escherichia coli, GI1786713, Length=254, Percent_Identity=29.5275590551181, Blast_Score=86, Evalue=3e-18,
Organism=Escherichia coli, GI1786508, Length=289, Percent_Identity=24.2214532871972, Blast_Score=85, Evalue=7e-18,
Organism=Escherichia coli, GI1787949, Length=286, Percent_Identity=29.020979020979, Blast_Score=82, Evalue=4e-17,
Organism=Escherichia coli, GI87082024, Length=262, Percent_Identity=26.7175572519084, Blast_Score=81, Evalue=1e-16,
Organism=Escherichia coli, GI1789492, Length=270, Percent_Identity=28.8888888888889, Blast_Score=80, Evalue=2e-16,
Organism=Escherichia coli, GI1789204, Length=293, Percent_Identity=26.962457337884, Blast_Score=65, Evalue=8e-12,

Paralogues:

None

Copy number: 10-20 Molecules/Cell [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000847
- InterPro:   IPR005119
- InterPro:   IPR011991 [H]

Pfam domain/function: PF00126 HTH_1; PF03466 LysR_substrate [H]

EC number: NA

Molecular weight: Translated: 32325; Mature: 32325

Theoretical pI: Translated: 7.68; Mature: 7.68

Prosite motif: PS50931 HTH_LYSR

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MERSPNLDQLRAFIAVVEAGSFSGAARRLERAQSVVSYAIANLESLLGVPLFERGKRRPT
CCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHCCCCCCC
LTAAGEIVLADARRLDMLAGQLLAKTAGLRGGVEAELSLAVDVMFPLARLVEGLRAFADE
EECCCCEEEECHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHC
FPTVALNLTIEALGGVMKLVVDGGCALGVSGPVQNWPDVIDATSMGAIELVTVAAPTHPL
CCEEEEEEEHHHHHHHHHHHHCCCEEECCCCCCCCCCHHHCCCCCCCEEEEEEECCCCHH
VQRRGRVPLSEAREYTQLVLTDRSKLTEGQSFGVYATRTWKTADLGAKHRLLLEGLGWGS
HHHCCCCCHHHHHHHHHHHHHCHHHHCCCCCCCEEEEECCCCCCCCCHHHHHHHCCCCCC
MPMHLIEDDLRQGRLAVVRLSDRDVIRYGMSLIRRADRASGPATQWLIDHLTRPGEPDA
CCHHHHHHHHCCCCEEEEEECCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCCCC
>Mature Secondary Structure
MERSPNLDQLRAFIAVVEAGSFSGAARRLERAQSVVSYAIANLESLLGVPLFERGKRRPT
CCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHCCCCCCC
LTAAGEIVLADARRLDMLAGQLLAKTAGLRGGVEAELSLAVDVMFPLARLVEGLRAFADE
EECCCCEEEECHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHC
FPTVALNLTIEALGGVMKLVVDGGCALGVSGPVQNWPDVIDATSMGAIELVTVAAPTHPL
CCEEEEEEEHHHHHHHHHHHHCCCEEECCCCCCCCCCHHHCCCCCCCEEEEEEECCCCHH
VQRRGRVPLSEAREYTQLVLTDRSKLTEGQSFGVYATRTWKTADLGAKHRLLLEGLGWGS
HHHCCCCCHHHHHHHHHHHHHCHHHHCCCCCCCEEEEECCCCCCCCCHHHHHHHCCCCCC
MPMHLIEDDLRQGRLAVVRLSDRDVIRYGMSLIRRADRASGPATQWLIDHLTRPGEPDA
CCHHHHHHHHCCCCEEEEEECCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA