| Definition | Burkholderia cenocepacia HI2424 chromosome 1, complete sequence. |
|---|---|
| Accession | NC_008542 |
| Length | 3,483,902 |
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The map label for this gene is fbpB2 [H]
Identifier: 116689231
GI number: 116689231
Start: 1331487
End: 1333175
Strand: Reverse
Name: fbpB2 [H]
Synonym: Bcen2424_1209
Alternate gene names: 116689231
Gene position: 1333175-1331487 (Counterclockwise)
Preceding gene: 116689232
Following gene: 116689230
Centisome position: 38.27
GC content: 72.65
Gene sequence:
>1689_bases TTGACAACTGACGCATCGCCCGCCCGCGCCTGCCGCGAGCCGAGCGGCCTGCGCCTGCGGCCGCGCGCGGGCAGCCTGTG GCTGCTCGCGGCGCTGACGATCGCCGCGGCGGTCGCGGCGCCGCTCGCGGTGCTCGTGGCCGCCGCCTTCGACGCCGATC TCGCGCACTGGCGGCATCTCGCGGAATTCGTGCTGCCGCAGGCGCTCGTCAATACGCTGCTGCTGCTCGCCGGGGTCGGC ACGATCGTGTCGATCGTCGGCACCGGCTGCGCATGGCTCGTCACCGCCTACGATTTTCCCGGCCGCCGGACCCTGACCTG GGCACTGCTGCTGCCGCTCGCGGTGCCCACCTACATCGTCGCGTTCGCGTATCTCGATCTGCTGCATCCGATCGGCCCCG TGCAAGGCGCGATCCGCTGGCTGCTCGGCTTCGACAGCCCGCGCCAGTTCCGTCTGCCCGACCTGCGTTCGCTGCCCGGC GCGATCTTCGTGCTCGGCTTCGTGCTGTATCCGTATGTCTATCTGAGCACGCGCGCGATGTTCGTCACGCAGTCCGCGAG CCTGCTCGAGGCCGCGCGCACGCTCGGCGCGGGCCGCCTCGCGACGTTCTGGCGCGTCGTCGTGCCGCTGGCCCGCCCGG CGATCGCGGTCGGCGTGAGCCTCGCGCTGCTCGAAACGCTGAACGATATCGGCGCGTCGGAATTCCTCGGCGTGCAGACG CTGACCGTGTCCGTCTATACGACGTGGATCACGCGCTCCGATCTCGCCGGCGCCGCGCAGATCGCGCTGGCGATGCTCGC GATCGTCGTCGGCATGATCGCGCTCGAACGCTATGGGCGCCGCCGCCAGCGCTACGCGCACGGCCGACGCATGCGGCCGA TCGCGCCGCGCCGCCTGACCGGCGCGGCCGCGCTGGGCGCCGCCGTGCTCGGCTGGCTACCCGTCCTGCTCGGCTTCGGC GCGCCGGCCGCGTACCTCACGGTCGAAACGGCCAAGCGGCTGCACCTCGTCGGCGGCATCTCCGCGCAATTGATGACGGG GCTCGCGAACACGCTGACGATCGCGACCGCCGCCACCGTCGCGACGCTCGCGTGCGGACTCGTCGTCGCGTGGGCCGCCC GCGCGCAGCGCGACAGCGCCGGTGCGGGCCCTGCCCGCCTGTGCGCGCGGATCGCGAGCCTCGGCTACGCGGTGCCAGGC ACCGTACTCGCGATCGGCCTGCTGATTCCGTTCGCGGCGGCCGACCGGCTGTTCGGCGCGGCGCTCGGCCGCGACGGGCT GCTGCTGATGGGTTCGGCGACCGCGCTCGTGATCGCCTATACCGTGCGTTTTCTCGCGATCCCGGCCGGCGGCATCGAGG CCGGCCTCGCGCGCATTCCGCCGTCGCTCGAACAGGCCGCGCGCTCGCTCGGCGAGACGGCCGGCGGCACGTTGCGCCGC ATCCACCTGCCGCTGTTGCGGCCCGCGCTCACGACGAGCGCGCTGCTGGTGTTCGTCGACGCGATGAAGGAGCTGCCGGC CACGCTGCTGCTGCGTCCGTTGAATTTCGACACGCTCGCGACCTGGCTGTATGCGGAAGCCGCGCGCGGCACCTATGAAG AAGGCGCGGTCGCCGCGCTCGCGATCGTGCTGGCCGGGCTCGTGCCCGTGATCCTGCTCGCCCGCACCCGCCACAAGATC GGAGCCTGA
Upstream 100 bases:
>100_bases GTGATCGCCAGCTTCGGCACGCTGAAAGTCGATCCGCTGCCGCTGGCGGACATCGCGAAGCATCGCAAGCAGGCGAGCCA GCTCGTCGACAAGGTCGGCT
Downstream 100 bases:
>100_bases CACCGTGAACCTGCTCGAACTCGACGACCTCTGCGTCGCCTACGACACGCCGCACGGCCGCCGCACCGTGGTCGACGGCC TGAGCCTCGCGCTGCCGCGC
Product: binding-protein-dependent transport systems inner membrane component
Products: ADP; phosphate; S2O32- [Cytoplasm]; SO42- [Cytoplasm] [C]
Alternate protein names: Iron(III)-transport system permease protein fbpB 2 [H]
Number of amino acids: Translated: 562; Mature: 561
Protein sequence:
>562_residues MTTDASPARACREPSGLRLRPRAGSLWLLAALTIAAAVAAPLAVLVAAAFDADLAHWRHLAEFVLPQALVNTLLLLAGVG TIVSIVGTGCAWLVTAYDFPGRRTLTWALLLPLAVPTYIVAFAYLDLLHPIGPVQGAIRWLLGFDSPRQFRLPDLRSLPG AIFVLGFVLYPYVYLSTRAMFVTQSASLLEAARTLGAGRLATFWRVVVPLARPAIAVGVSLALLETLNDIGASEFLGVQT LTVSVYTTWITRSDLAGAAQIALAMLAIVVGMIALERYGRRRQRYAHGRRMRPIAPRRLTGAAALGAAVLGWLPVLLGFG APAAYLTVETAKRLHLVGGISAQLMTGLANTLTIATAATVATLACGLVVAWAARAQRDSAGAGPARLCARIASLGYAVPG TVLAIGLLIPFAAADRLFGAALGRDGLLLMGSATALVIAYTVRFLAIPAGGIEAGLARIPPSLEQAARSLGETAGGTLRR IHLPLLRPALTTSALLVFVDAMKELPATLLLRPLNFDTLATWLYAEAARGTYEEGAVAALAIVLAGLVPVILLARTRHKI GA
Sequences:
>Translated_562_residues MTTDASPARACREPSGLRLRPRAGSLWLLAALTIAAAVAAPLAVLVAAAFDADLAHWRHLAEFVLPQALVNTLLLLAGVG TIVSIVGTGCAWLVTAYDFPGRRTLTWALLLPLAVPTYIVAFAYLDLLHPIGPVQGAIRWLLGFDSPRQFRLPDLRSLPG AIFVLGFVLYPYVYLSTRAMFVTQSASLLEAARTLGAGRLATFWRVVVPLARPAIAVGVSLALLETLNDIGASEFLGVQT LTVSVYTTWITRSDLAGAAQIALAMLAIVVGMIALERYGRRRQRYAHGRRMRPIAPRRLTGAAALGAAVLGWLPVLLGFG APAAYLTVETAKRLHLVGGISAQLMTGLANTLTIATAATVATLACGLVVAWAARAQRDSAGAGPARLCARIASLGYAVPG TVLAIGLLIPFAAADRLFGAALGRDGLLLMGSATALVIAYTVRFLAIPAGGIEAGLARIPPSLEQAARSLGETAGGTLRR IHLPLLRPALTTSALLVFVDAMKELPATLLLRPLNFDTLATWLYAEAARGTYEEGAVAALAIVLAGLVPVILLARTRHKI GA >Mature_561_residues TTDASPARACREPSGLRLRPRAGSLWLLAALTIAAAVAAPLAVLVAAAFDADLAHWRHLAEFVLPQALVNTLLLLAGVGT IVSIVGTGCAWLVTAYDFPGRRTLTWALLLPLAVPTYIVAFAYLDLLHPIGPVQGAIRWLLGFDSPRQFRLPDLRSLPGA IFVLGFVLYPYVYLSTRAMFVTQSASLLEAARTLGAGRLATFWRVVVPLARPAIAVGVSLALLETLNDIGASEFLGVQTL TVSVYTTWITRSDLAGAAQIALAMLAIVVGMIALERYGRRRQRYAHGRRMRPIAPRRLTGAAALGAAVLGWLPVLLGFGA PAAYLTVETAKRLHLVGGISAQLMTGLANTLTIATAATVATLACGLVVAWAARAQRDSAGAGPARLCARIASLGYAVPGT VLAIGLLIPFAAADRLFGAALGRDGLLLMGSATALVIAYTVRFLAIPAGGIEAGLARIPPSLEQAARSLGETAGGTLRRI HLPLLRPALTTSALLVFVDAMKELPATLLLRPLNFDTLATWLYAEAARGTYEEGAVAALAIVLAGLVPVILLARTRHKIG A
Specific function: Part of the ABC transporter complex fbpABC (TC 3.A.1.10.1) involved in Fe(3+) ions import. Probably responsible for the translocation of the substrate across the membrane [H]
COG id: COG1178
COG function: function code P; ABC-type Fe3+ transport system, permease component
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein (Probable) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 2 ABC transmembrane type-1 domains [H]
Homologues:
Organism=Escherichia coli, GI1788764, Length=164, Percent_Identity=31.7073170731707, Blast_Score=62, Evalue=1e-10,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000515 [H]
Pfam domain/function: PF00528 BPD_transp_1 [H]
EC number: NA
Molecular weight: Translated: 58997; Mature: 58865
Theoretical pI: Translated: 10.92; Mature: 10.92
Prosite motif: PS50928 ABC_TM1 ; PS00216 SUGAR_TRANSPORT_1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTTDASPARACREPSGLRLRPRAGSLWLLAALTIAAAVAAPLAVLVAAAFDADLAHWRHL CCCCCCHHHHHCCCCCCEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH AEFVLPQALVNTLLLLAGVGTIVSIVGTGCAWLVTAYDFPGRRTLTWALLLPLAVPTYIV HHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHEEECCCCCHHHHHHHHHHHHHHHHHH AFAYLDLLHPIGPVQGAIRWLLGFDSPRQFRLPDLRSLPGAIFVLGFVLYPYVYLSTRAM HHHHHHHHHCCCHHHHHHHHHHCCCCCCCCCCCCHHHCCHHHHHHHHHHHHHHHHHHHHH FVTQSASLLEAARTLGAGRLATFWRVVVPLARPAIAVGVSLALLETLNDIGASEFLGVQT HHCCHHHHHHHHHHHCCCHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHCCHHHHHHHHE LTVSVYTTWITRSDLAGAAQIALAMLAIVVGMIALERYGRRRQRYAHGRRMRPIAPRRLT EEEEHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHH GAAALGAAVLGWLPVLLGFGAPAAYLTVETAKRLHLVGGISAQLMTGLANTLTIATAATV HHHHHHHHHHHHHHHHHHCCCCHHEEEHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHH ATLACGLVVAWAARAQRDSAGAGPARLCARIASLGYAVPGTVLAIGLLIPFAAADRLFGA HHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHH ALGRDGLLLMGSATALVIAYTVRFLAIPAGGIEAGLARIPPSLEQAARSLGETAGGTLRR HHCCCCEEEECCHHHHHHHHHHHHHHCCCCCHHHHHHHCCCHHHHHHHHHHHHCCCCHHH IHLPLLRPALTTSALLVFVDAMKELPATLLLRPLNFDTLATWLYAEAARGTYEEGAVAAL HHHHHHHHHHHHHHHHHHHHHHHHCCHHHEECCCCHHHHHHHHHHHHHCCCCHHHHHHHH AIVLAGLVPVILLARTRHKIGA HHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure TTDASPARACREPSGLRLRPRAGSLWLLAALTIAAAVAAPLAVLVAAAFDADLAHWRHL CCCCCHHHHHCCCCCCEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH AEFVLPQALVNTLLLLAGVGTIVSIVGTGCAWLVTAYDFPGRRTLTWALLLPLAVPTYIV HHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHEEECCCCCHHHHHHHHHHHHHHHHHH AFAYLDLLHPIGPVQGAIRWLLGFDSPRQFRLPDLRSLPGAIFVLGFVLYPYVYLSTRAM HHHHHHHHHCCCHHHHHHHHHHCCCCCCCCCCCCHHHCCHHHHHHHHHHHHHHHHHHHHH FVTQSASLLEAARTLGAGRLATFWRVVVPLARPAIAVGVSLALLETLNDIGASEFLGVQT HHCCHHHHHHHHHHHCCCHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHCCHHHHHHHHE LTVSVYTTWITRSDLAGAAQIALAMLAIVVGMIALERYGRRRQRYAHGRRMRPIAPRRLT EEEEHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHH GAAALGAAVLGWLPVLLGFGAPAAYLTVETAKRLHLVGGISAQLMTGLANTLTIATAATV HHHHHHHHHHHHHHHHHHCCCCHHEEEHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHH ATLACGLVVAWAARAQRDSAGAGPARLCARIASLGYAVPGTVLAIGLLIPFAAADRLFGA HHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHH ALGRDGLLLMGSATALVIAYTVRFLAIPAGGIEAGLARIPPSLEQAARSLGETAGGTLRR HHCCCCEEEECCHHHHHHHHHHHHHHCCCCCHHHHHHHCCCHHHHHHHHHHHHCCCCHHH IHLPLLRPALTTSALLVFVDAMKELPATLLLRPLNFDTLATWLYAEAARGTYEEGAVAAL HHHHHHHHHHHHHHHHHHHHHHHHCCHHHEECCCCHHHHHHHHHHHHHCCCCHHHHHHHH AIVLAGLVPVILLARTRHKIGA HHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: ATP; S2O32- [Periplasm]; H2O; SO42- [Periplasm]; ATP [C]
Specific reaction: ATP + S2O32- [Periplasm] + H2O = ADP + phosphate + S2O32- [Cytoplasm] SO42- [Periplasm] + H2O + ATP = SO42- [Cytoplasm] + phosphate + ADP [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 7542800; 7927717 [H]