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The map label for this gene is 116689193

Identifier: 116689193

GI number: 116689193

Start: 1286176

End: 1287597

Strand: Direct

Name: 116689193

Synonym: Bcen2424_1171

Alternate gene names: NA

Gene position: 1286176-1287597 (Clockwise)

Preceding gene: 116689192

Following gene: 116689194

Centisome position: 36.92

GC content: 62.03

Gene sequence:

>1422_bases
ATGAAAACGCTGTTCTTGCAGGCCCCTTCGTATGACGGCTTCGACGGCGGAGCCGGCTCGCGCTATCAGGCGAAGCGCGA
AATCCGTTCCTTCTGGTATCCGACCTGGCTCGCGCAGCCGGCCGCGCTCGTGCCGGGCAGCCGCGTCGTCGATGCGCCGG
CCGACGGCCTGTCGGTCGAGGAAACGCTGAAGATCGCCAACGACTACGACCTCGTGATCATCCACACGAGCACGCCGTCG
TTCCCGACCGACGCGATGTTCGCGCAGGATCTGAAGAAGATGAAGCCGTCGATGCTCGTCGGCATGGTCGGCGCGAAGGT
GATGGTCGATCCGCACAACTCGCTCACGGCGAGCGAGGCGATCGACTTCGTGTGCCGCGAGGAATTCGACTACACCTGCA
AGGAGCTCGCCGAAGGCAAGCCGTTCCCCGAGATCAAGGGCTTGAGCTGGCGCGCGAAGGACGGCTCGATCGAGCACAAC
GAAGCGCGTCCGATCCTCGAGAACATGGACGAACTGCCGTTCGTCGCGCCCGTCTACAAGCGCGACCTGAAGATCGACAA
CTACTTCATCGGCTACCTGAACTATCCGTACGTGTCGATCTACACGGGCCGCGGCTGCAAGTCGCGCTGCACGTTCTGCC
TGTGGCCGCAGACGGTCAGCGGCCATCGCTACCGCACGCGCTCGGTCGAGAACGTGCTCGCGGAAGCGAAGTGGATTCGC
GACAACATGCCGGAAGTGAAGGAACTGATGTTCGACGACGACACCTTCACCGACGACCTGCCGCGCGCCGAAGCCATCGC
CATCGGCCTGGGCAAGCTCGGCATCACGTGGTCGTGCAACGCGAAGGCCAACGTGCCGTACAAGTCGCTGAAGATCATGA
AGGAAAACGGCCTGCGCCTGTTGCTGGTCGGCTTCGAATCGGGCGACGACCAGATCCTCGTGAACATCAAGAAGGGCGTG
CGCACCGATTTCGCGCGCCGTTTCAGCGCGGACTGCAAGAAGCTCGGCATCAAGATCCACGGCACCTTCATCCTCGGCCT
GCCGGGCGAGACGCAGGAAACCATCAAGAAGACGATCGAGTACGCGAAGGAAATCAATCCGCATACGATCCAGGTGTCCC
TCGCCGCGCCGTATCCGGGCACGACGCTGTACAAGCAGGCCGTGGAAAACGGCTGGATGGAAGAGAACAAGACCATCAAC
CTGGTCAGCAAGGAAGGCGTGCAGCTCGCGGCGATCGGCTATGCGCACCTGTCGCGCGACGAGATCTACCACCATCTCGA
GCAGTTCTATCGCGAGTTCTATTTCCGTCCGTCGAAGATCTGGGAAATCGTGCGCGAGATGCTGACGAGCTGGGACATGA
TGAAGCGTCGCCTGCGCGAAGGCGTCGAGTTCTTCCGCTTCCTGCGCGCGCACGAGGCCTGA

Upstream 100 bases:

>100_bases
CGGCGCGACATGACAGAGAGGCGGGCGCCGGCATGGCGGCCCGCGGTTTTTTGACTGAATCGTTGTAACGAAACGAACTA
TGCAGGCTACCGGAGCATTC

Downstream 100 bases:

>100_bases
TCCGTGGCGACGCAGCGGGCGGCGCGGGCGCTGATCTTCACCGCGGACGACTTCGGGCTGCACCCGCGCGTCAACGCGGC
GGTCGAGCGCGCGCACCGCG

Product: radical SAM domain-containing protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 473; Mature: 473

Protein sequence:

>473_residues
MKTLFLQAPSYDGFDGGAGSRYQAKREIRSFWYPTWLAQPAALVPGSRVVDAPADGLSVEETLKIANDYDLVIIHTSTPS
FPTDAMFAQDLKKMKPSMLVGMVGAKVMVDPHNSLTASEAIDFVCREEFDYTCKELAEGKPFPEIKGLSWRAKDGSIEHN
EARPILENMDELPFVAPVYKRDLKIDNYFIGYLNYPYVSIYTGRGCKSRCTFCLWPQTVSGHRYRTRSVENVLAEAKWIR
DNMPEVKELMFDDDTFTDDLPRAEAIAIGLGKLGITWSCNAKANVPYKSLKIMKENGLRLLLVGFESGDDQILVNIKKGV
RTDFARRFSADCKKLGIKIHGTFILGLPGETQETIKKTIEYAKEINPHTIQVSLAAPYPGTTLYKQAVENGWMEENKTIN
LVSKEGVQLAAIGYAHLSRDEIYHHLEQFYREFYFRPSKIWEIVREMLTSWDMMKRRLREGVEFFRFLRAHEA

Sequences:

>Translated_473_residues
MKTLFLQAPSYDGFDGGAGSRYQAKREIRSFWYPTWLAQPAALVPGSRVVDAPADGLSVEETLKIANDYDLVIIHTSTPS
FPTDAMFAQDLKKMKPSMLVGMVGAKVMVDPHNSLTASEAIDFVCREEFDYTCKELAEGKPFPEIKGLSWRAKDGSIEHN
EARPILENMDELPFVAPVYKRDLKIDNYFIGYLNYPYVSIYTGRGCKSRCTFCLWPQTVSGHRYRTRSVENVLAEAKWIR
DNMPEVKELMFDDDTFTDDLPRAEAIAIGLGKLGITWSCNAKANVPYKSLKIMKENGLRLLLVGFESGDDQILVNIKKGV
RTDFARRFSADCKKLGIKIHGTFILGLPGETQETIKKTIEYAKEINPHTIQVSLAAPYPGTTLYKQAVENGWMEENKTIN
LVSKEGVQLAAIGYAHLSRDEIYHHLEQFYREFYFRPSKIWEIVREMLTSWDMMKRRLREGVEFFRFLRAHEA
>Mature_473_residues
MKTLFLQAPSYDGFDGGAGSRYQAKREIRSFWYPTWLAQPAALVPGSRVVDAPADGLSVEETLKIANDYDLVIIHTSTPS
FPTDAMFAQDLKKMKPSMLVGMVGAKVMVDPHNSLTASEAIDFVCREEFDYTCKELAEGKPFPEIKGLSWRAKDGSIEHN
EARPILENMDELPFVAPVYKRDLKIDNYFIGYLNYPYVSIYTGRGCKSRCTFCLWPQTVSGHRYRTRSVENVLAEAKWIR
DNMPEVKELMFDDDTFTDDLPRAEAIAIGLGKLGITWSCNAKANVPYKSLKIMKENGLRLLLVGFESGDDQILVNIKKGV
RTDFARRFSADCKKLGIKIHGTFILGLPGETQETIKKTIEYAKEINPHTIQVSLAAPYPGTTLYKQAVENGWMEENKTIN
LVSKEGVQLAAIGYAHLSRDEIYHHLEQFYREFYFRPSKIWEIVREMLTSWDMMKRRLREGVEFFRFLRAHEA

Specific function: Unknown

COG id: COG1032

COG function: function code C; Fe-S oxidoreductase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 B12-binding domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006158
- InterPro:   IPR006638
- InterPro:   IPR005839
- InterPro:   IPR007197 [H]

Pfam domain/function: PF02310 B12-binding; PF04055 Radical_SAM [H]

EC number: NA

Molecular weight: Translated: 53956; Mature: 53956

Theoretical pI: Translated: 7.28; Mature: 7.28

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
4.4 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
4.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKTLFLQAPSYDGFDGGAGSRYQAKREIRSFWYPTWLAQPAALVPGSRVVDAPADGLSVE
CCEEEEECCCCCCCCCCCCCHHHHHHHHHHHCCHHHHCCCCCCCCCCEEECCCCCCCCHH
ETLKIANDYDLVIIHTSTPSFPTDAMFAQDLKKMKPSMLVGMVGAKVMVDPHNSLTASEA
HHHHHCCCCEEEEEEECCCCCCCHHHHHHHHHHHCHHHHHHHHCCEEEECCCCCCCHHHH
IDFVCREEFDYTCKELAEGKPFPEIKGLSWRAKDGSIEHNEARPILENMDELPFVAPVYK
HHHHHHHCCCHHHHHHHCCCCCCCCCCCEEECCCCCCCCCCCCCHHHCHHHCCCCCHHHH
RDLKIDNYFIGYLNYPYVSIYTGRGCKSRCTFCLWPQTVSGHRYRTRSVENVLAEAKWIR
HCCEECCEEEEEECCCEEEEEECCCCCCCCCEEECCCCCCCCCCHHHHHHHHHHHHHHHH
DNMPEVKELMFDDDTFTDDLPRAEAIAIGLGKLGITWSCNAKANVPYKSLKIMKENGLRL
CCCHHHHHHHCCCCCCCCCCCCCCEEEEECCCCCEEEECCCCCCCCHHHHHHHCCCCCEE
LLVGFESGDDQILVNIKKGVRTDFARRFSADCKKLGIKIHGTFILGLPGETQETIKKTIE
EEEEECCCCCEEEEEEHHHHHHHHHHHHHHHHHHCCEEEEEEEEEECCCCHHHHHHHHHH
YAKEINPHTIQVSLAAPYPGTTLYKQAVENGWMEENKTINLVSKEGVQLAAIGYAHLSRD
HHHHCCCEEEEEEEECCCCCHHHHHHHHHCCCCCCCCEEEEEECCCEEEEEEEHHHCCHH
EIYHHLEQFYREFYFRPSKIWEIVREMLTSWDMMKRRLREGVEFFRFLRAHEA
HHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MKTLFLQAPSYDGFDGGAGSRYQAKREIRSFWYPTWLAQPAALVPGSRVVDAPADGLSVE
CCEEEEECCCCCCCCCCCCCHHHHHHHHHHHCCHHHHCCCCCCCCCCEEECCCCCCCCHH
ETLKIANDYDLVIIHTSTPSFPTDAMFAQDLKKMKPSMLVGMVGAKVMVDPHNSLTASEA
HHHHHCCCCEEEEEEECCCCCCCHHHHHHHHHHHCHHHHHHHHCCEEEECCCCCCCHHHH
IDFVCREEFDYTCKELAEGKPFPEIKGLSWRAKDGSIEHNEARPILENMDELPFVAPVYK
HHHHHHHCCCHHHHHHHCCCCCCCCCCCEEECCCCCCCCCCCCCHHHCHHHCCCCCHHHH
RDLKIDNYFIGYLNYPYVSIYTGRGCKSRCTFCLWPQTVSGHRYRTRSVENVLAEAKWIR
HCCEECCEEEEEECCCEEEEEECCCCCCCCCEEECCCCCCCCCCHHHHHHHHHHHHHHHH
DNMPEVKELMFDDDTFTDDLPRAEAIAIGLGKLGITWSCNAKANVPYKSLKIMKENGLRL
CCCHHHHHHHCCCCCCCCCCCCCCEEEEECCCCCEEEECCCCCCCCHHHHHHHCCCCCEE
LLVGFESGDDQILVNIKKGVRTDFARRFSADCKKLGIKIHGTFILGLPGETQETIKKTIE
EEEEECCCCCEEEEEEHHHHHHHHHHHHHHHHHHCCEEEEEEEEEECCCCHHHHHHHHHH
YAKEINPHTIQVSLAAPYPGTTLYKQAVENGWMEENKTINLVSKEGVQLAAIGYAHLSRD
HHHHCCCEEEEEEEECCCCCHHHHHHHHHCCCCCCCCEEEEEECCCEEEEEEEHHHCCHH
EIYHHLEQFYREFYFRPSKIWEIVREMLTSWDMMKRRLREGVEFFRFLRAHEA
HHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9679194 [H]